RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 MAP4K3Q8IVH8 894 aa13.42□□□□□ -0.26
RAB3IP-201ENST00000247833 MCPH1Q8NEM0 835 aa13.42□□□□□ -0.26
RAB3IP-201ENST00000247833 WRNIP1Q96S55 665 aa13.42□□□□□ -0.26
RAB3IP-201ENST00000247833 MYOZ2Q9NPC6 264 aa13.42□□□□□ -0.26
RAB3IP-201ENST00000247833 NUDT17P0C025 328 aa13.42□□□□□ -0.26
RAB3IP-201ENST00000247833 DPEP1P16444 411 aa13.42□□□□□ -0.26
RAB3IP-201ENST00000247833 FNTAP49354 379 aa13.42□□□□□ -0.26
RAB3IP-201ENST00000247833 NLRP11P59045 1033 aaKnown RBP13.42□□□□□ -0.26
RAB3IP-201ENST00000247833 BPIFB4P59827 614 aa13.42□□□□□ -0.26
RAB3IP-201ENST00000247833 TNFAIP1Q13829 316 aa13.42□□□□□ -0.26
RAB3IP-201ENST00000247833 CYB5D1Q6P9G0 228 aa13.42□□□□□ -0.26
RAB3IP-201ENST00000247833 PARP9Q8IXQ6 854 aa13.42□□□□□ -0.26
RAB3IP-201ENST00000247833 MCOLN2Q8IZK6 566 aa13.42□□□□□ -0.26
RAB3IP-201ENST00000247833 ANKRD35Q8N283 1001 aa13.42□□□□□ -0.26
RAB3IP-201ENST00000247833 C1orf131Q8NDD1 294 aaKnown RBP13.42□□□□□ -0.26
RAB3IP-201ENST00000247833 SLC17A8Q8NDX2 589 aa13.42□□□□□ -0.26
RAB3IP-201ENST00000247833 SLC7A3Q8WY07 619 aa13.42□□□□□ -0.26
RAB3IP-201ENST00000247833 OSBPL8Q9BZF1 889 aa13.42□□□□□ -0.26
RAB3IP-201ENST00000247833 ANKEF1Q9NU02 776 aa13.42□□□□□ -0.26
RAB3IP-201ENST00000247833 PCDHB2Q9Y5E7 798 aa13.42□□□□□ -0.26
RAB3IP-201ENST00000247833 EXOC1LA0A1B0GW35 172 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 RASA4BC9J798 803 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 RASA4O43374 803 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 DKC1O60832 514 aaKnown RBP eCLIP13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 GNPTABQ3T906 1256 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 PGM2Q96G03 612 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 TACO1Q9BSH4 297 aaKnown RBP13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 MTFR1LQ9H019 292 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 SLC38A10Q9HBR0 1119 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 NXF1Q9UBU9 619 aaKnown RBP13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 SLC9A2Q9UBY0 812 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 LTBP4Q8N2S1 1624 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 ZNF862O60290 1169 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 CYP1A2P05177 515 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 SRGAP2CP0DJJ0 459 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 TFAMQ00059 246 aaKnown RBP13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 TRPC3Q13507 836 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 P3H1Q32P28 736 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 CDR2LQ86X02 465 aaPredicted RBP13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 CCDC60Q8IWA6 550 aaPredicted RBP13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 KIF2BQ8N4N8 673 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 ATL2Q8NHH9 583 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 NSUN6Q8TEA1 469 aaKnown RBP13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 LPAR1Q92633 364 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 TLCD1Q96CP7 247 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 SGK1O00141 431 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 CHUKO15111 745 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 DGAT1O75907 488 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 SUN1O94901 812 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 EGFRP00533 1210 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 OLIG1Q8TAK6 271 aa13.41□□□□□ -0.26
RAB3IP-201ENST00000247833 CFHP08603 1231 aa13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 MAPTP10636 758 aaKnown RBP13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 GBP2P32456 591 aaPredicted RBP13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 NCKAP1LP55160 1127 aa13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 ACTR2P61160 394 aa13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 EXOC3L1Q86VI1 746 aa13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 RHOT1Q8IXI2 618 aa13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 CCDC89Q8N998 374 aa13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 RBBP8NLQ8NC74 664 aaPredicted RBP13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 TGS1Q96RS0 853 aaKnown RBP13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 RBM15Q96T37 977 aaKnown RBP eCLIP13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 ABCF3Q9NUQ8 709 aa13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 ADGRA3Q8IWK6 1321 aa13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 CNTNAP1P78357 1384 aa13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 GPC3P51654 580 aa13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 DRG2P55039 364 aaKnown RBP13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 NBPF12Q5TAG4 269 aaPredicted RBP13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 TRMT10CQ7L0Y3 403 aaKnown RBP13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 TRPM8Q7Z2W7 1104 aa13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 SEC14L1Q92503 715 aa13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 KLHL29Q96CT2 875 aa13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 PPP1R16BQ96T49 567 aa13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 ZWILCHQ9H900 591 aa13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 MRPL47Q9HD33 250 aaKnown RBP13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 CYP26B1Q9NR63 512 aa13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 TAF1LQ8IZX4 1826 aa13.4□□□□□ -0.26
RAB3IP-201ENST00000247833 WDR91A4D1P6 747 aa13.4□□□□□ -0.27
RAB3IP-201ENST00000247833 PEX10O60683 326 aa13.4□□□□□ -0.27
RAB3IP-201ENST00000247833 PIAS1O75925 651 aa13.4□□□□□ -0.27
RAB3IP-201ENST00000247833 ITIH2P19823 946 aa13.4□□□□□ -0.27
RAB3IP-201ENST00000247833 MMP13P45452 471 aa13.4□□□□□ -0.27
RAB3IP-201ENST00000247833 GPS1Q13098 491 aa13.4□□□□□ -0.27
RAB3IP-201ENST00000247833 SYCP2LQ5T4T6 812 aa13.4□□□□□ -0.27
RAB3IP-201ENST00000247833 DNAJC24Q6P3W2 148 aa13.4□□□□□ -0.27
RAB3IP-201ENST00000247833 ART4Q93070 314 aa13.4□□□□□ -0.27
RAB3IP-201ENST00000247833 EPB41L4BQ9H329 900 aa13.4□□□□□ -0.27
RAB3IP-201ENST00000247833 FBXO40Q9UH90 709 aa13.4□□□□□ -0.27
RAB3IP-201ENST00000247833 GH1P01241 217 aa13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 ZSCAN5DPP0CG00 497 aa13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 NOP14P78316 857 aaKnown RBP13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 EMC2Q15006 297 aa13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 MIS18BP1Q6P0N0 1132 aa13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 YTHDF3Q7Z739 585 aaKnown RBP13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 VSIG1Q86XK7 387 aa13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 THNSL1Q8IYQ7 743 aa13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 FUKQ8N0W3 1084 aa13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 TRIM11Q96F44 468 aa13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 TRAIPQ9BWF2 469 aa13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 STRA6Q9BX79 667 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms