RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 CDHR1Q96JP9 859 aa23.08■■□□□ 1.29
SH2D3A-201ENST00000245908 ZNF317Q96PQ6 595 aaPredicted RBP23.08■■□□□ 1.29
SH2D3A-201ENST00000245908 ROPN1BQ9BZX4 212 aaPredicted RBP23.08■■□□□ 1.29
SH2D3A-201ENST00000245908 ROPN1Q9HAT0 212 aaPredicted RBP23.08■■□□□ 1.29
SH2D3A-201ENST00000245908 STYXL1Q9Y6J8 313 aa23.08■■□□□ 1.29
SH2D3A-201ENST00000245908 SIP14410 1827 aa23.08■■□□□ 1.29
SH2D3A-201ENST00000245908 RASGRF2O14827 1237 aa23.08■■□□□ 1.29
SH2D3A-201ENST00000245908 HLA-DRAP01903 254 aa23.08■■□□□ 1.29
SH2D3A-201ENST00000245908 C4BPAP04003 597 aaKnown RBP23.08■■□□□ 1.29
SH2D3A-201ENST00000245908 AUHQ13825 339 aaKnown RBP23.08■■□□□ 1.29
SH2D3A-201ENST00000245908 CPA5Q8WXQ8 436 aa23.08■■□□□ 1.29
SH2D3A-201ENST00000245908 ACTR5Q9H9F9 607 aaPredicted RBP23.08■■□□□ 1.29
SH2D3A-201ENST00000245908 AAASQ9NRG9 546 aa23.08■■□□□ 1.29
SH2D3A-201ENST00000245908 H0YHG0 523 aa23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 ITIH2P19823 946 aa23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 RXRBP28702 533 aa23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 PTP4A2Q12974 167 aa23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 PTK6Q13882 451 aa23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 MON1BQ7L1V2 547 aa23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 KCNN1Q92952 543 aa23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 DDX27Q96GQ7 796 aaKnown RBP23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 CHST7Q9NS84 486 aa23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 KCNG1Q9UIX4 513 aa23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 ZNF214Q9UL59 606 aaPredicted RBP23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 ADAMTS5Q9UNA0 930 aa23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 MYH9P35579 1960 aaKnown RBP23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 NSFP46459 744 aaKnown RBP23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 LLGL1Q15334 1064 aa23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 XKR3Q5GH77 459 aa23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 TDRD10Q5VZ19 366 aaKnown RBP23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 LMBRD2Q68DH5 695 aaPredicted RBP23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 CCDC25Q86WR0 208 aa23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 SCYL3Q8IZE3 742 aa23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 FNBP1Q96RU3 617 aa23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 OSBPL7Q9BZF2 842 aa23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 CDC42EP4Q9H3Q1 356 aaKnown RBP23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 CCDC134Q9H6E4 229 aa23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.07■■□□□ 1.28
SH2D3A-201ENST00000245908 DSG3P32926 999 aa23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 WNT7BP56706 349 aa23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 SP4Q02446 784 aa23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 SNX1Q13596 522 aa23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 CCDC13Q8IYE1 715 aa23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 GRK7Q8WTQ7 553 aa23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 JDP2Q8WYK2 163 aa23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 SNF8Q96H20 258 aa23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 HERPUD2Q9BSE4 406 aa23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 DCLK3Q9C098 648 aa23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 AS3MTQ9HBK9 375 aa23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 ASIC3Q9UHC3 531 aa23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 STAM2O75886 525 aa23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 ACO1P21399 889 aaKnown RBP23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 IVDP26440 423 aa23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 PIK3CAP42336 1068 aa23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 NLRP11P59045 1033 aaKnown RBP23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 EMC2Q15006 297 aa23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 MTERF2Q49AM1 385 aa23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 MIS18BP1Q6P0N0 1132 aa23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 ZNF280CQ8ND82 737 aa23.06■■□□□ 1.28
SH2D3A-201ENST00000245908 SPATA31C2B4DYI2 1134 aa23.05■■□□□ 1.28
SH2D3A-201ENST00000245908 PROSCO94903 275 aa23.05■■□□□ 1.28
SH2D3A-201ENST00000245908 VNN1O95497 513 aa23.05■■□□□ 1.28
SH2D3A-201ENST00000245908 SUPT20HL2P0C7V6 817 aa23.05■■□□□ 1.28
SH2D3A-201ENST00000245908 TNNI1P19237 187 aa23.05■■□□□ 1.28
SH2D3A-201ENST00000245908 SLCO1A2P46721 670 aa23.05■■□□□ 1.28
SH2D3A-201ENST00000245908 SUPT20HL1Q3ZLR7 823 aa23.05■■□□□ 1.28
SH2D3A-201ENST00000245908 NBPF12Q5TAG4 269 aaPredicted RBP23.05■■□□□ 1.28
SH2D3A-201ENST00000245908 ATG4AQ8WYN0 398 aa23.05■■□□□ 1.28
SH2D3A-201ENST00000245908 P3H4Q92791 437 aa23.05■■□□□ 1.28
SH2D3A-201ENST00000245908 C12orf42Q96LP6 360 aa23.05■■□□□ 1.28
SH2D3A-201ENST00000245908 INTS9Q9NV88 658 aaKnown RBP23.05■■□□□ 1.28
SH2D3A-201ENST00000245908 CYP39A1Q9NYL5 469 aa23.05■■□□□ 1.28
SH2D3A-201ENST00000245908 AGO2Q9UKV8 859 aaKnown RBP23.05■■□□□ 1.28
SH2D3A-201ENST00000245908 UMODL1Q5DID0 1318 aa23.05■■□□□ 1.28
SH2D3A-201ENST00000245908 PIGRP01833 764 aa23.05■■□□□ 1.28
SH2D3A-201ENST00000245908 RPS12P25398 132 aaKnown RBP23.05■■□□□ 1.28
SH2D3A-201ENST00000245908 STRN3Q13033 797 aa23.05■■□□□ 1.28
SH2D3A-201ENST00000245908 TRIM72Q6ZMU5 477 aa23.05■■□□□ 1.28
SH2D3A-201ENST00000245908 TAOK1Q7L7X3 1001 aa23.05■■□□□ 1.28
SH2D3A-201ENST00000245908 PTPRJQ12913 1337 aa23.04■■□□□ 1.28
SH2D3A-201ENST00000245908 GNPTABQ3T906 1256 aa23.04■■□□□ 1.28
SH2D3A-201ENST00000245908 LACTB2Q53H82 288 aaPredicted RBP23.04■■□□□ 1.28
SH2D3A-201ENST00000245908 ANKRD20A8PQ5CZ79 823 aa23.04■■□□□ 1.28
SH2D3A-201ENST00000245908 DCAF15Q66K64 600 aa23.04■■□□□ 1.28
SH2D3A-201ENST00000245908 SPOPLQ6IQ16 392 aa23.04■■□□□ 1.28
SH2D3A-201ENST00000245908 LLGL2Q6P1M3 1020 aa23.04■■□□□ 1.28
SH2D3A-201ENST00000245908 CRELD2Q6UXH1 353 aaPredicted RBP23.04■■□□□ 1.28
SH2D3A-201ENST00000245908 PHLDB2Q86SQ0 1253 aa23.04■■□□□ 1.28
SH2D3A-201ENST00000245908 DDX23Q9BUQ8 820 aaKnown RBP23.04■■□□□ 1.28
SH2D3A-201ENST00000245908 HACL1Q9UJ83 578 aa23.04■■□□□ 1.28
SH2D3A-201ENST00000245908 ZNF112Q9UJU3 913 aa23.04■■□□□ 1.28
SH2D3A-201ENST00000245908 GOLGA6L7A0A1B0GV03 622 aa23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 ASAP2O43150 1006 aa23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 PSTPIP1O43586 416 aa23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 GAS8O95995 478 aa23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 CHKAP35790 457 aa23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 POLGP54098 1239 aaPredicted RBP23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 CAV1Q03135 178 aa23.03■■□□□ 1.28
SH2D3A-201ENST00000245908 KLF1Q13351 362 aaPredicted RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms