RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 RPS6KA5O75582 802 aa20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 KRT19P08727 400 aa20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 KRT5P13647 590 aa20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 THPOP40225 353 aa20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 ARHGAP25P42331 645 aa20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 TMEM132DQ14C87 1099 aa20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 SLC10A6Q3KNW5 377 aa20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 JADE1Q6IE81 842 aa20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 NT5DC4Q86YG4 428 aa20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 EFCAB13Q8IY85 973 aa20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 MCOLN1Q9GZU1 580 aa20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 SEPT11Q9NVA2 429 aaKnown RBP20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 GRIN2DO15399 1336 aa20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 KBTBD13C9JR72 458 aa20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 CST3P01034 146 aaPredicted RBP20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 CTSHP09668 335 aa20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 PTK7Q13308 1070 aa20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 CUL2Q13617 745 aa20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 ZNF569Q5MCW4 686 aa20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 SPOPLQ6IQ16 392 aa20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 ALKBH5Q6P6C2 394 aaKnown RBP20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 EIF2AQ9BY44 585 aaKnown RBP20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.13■□□□□ 0.813e-6■□□□□ 10.4
TNFSF9-201ENST00000245817 SNTG2Q9NY99 539 aa20.13■□□□□ 0.81
TNFSF9-201ENST00000245817 CYP26A1O43174 497 aa20.12■□□□□ 0.81
TNFSF9-201ENST00000245817 NFICP08651 508 aa20.12■□□□□ 0.81
TNFSF9-201ENST00000245817 PDE6CP51160 858 aa20.12■□□□□ 0.81
TNFSF9-201ENST00000245817 MYL6P60660 151 aa20.12■□□□□ 0.81
TNFSF9-201ENST00000245817 ELMO3Q96BJ8 720 aa20.12■□□□□ 0.81
TNFSF9-201ENST00000245817 AGPAT1Q99943 283 aa20.12■□□□□ 0.81
TNFSF9-201ENST00000245817 STARD7Q9NQZ5 370 aa20.12■□□□□ 0.81
TNFSF9-201ENST00000245817 NOC2LQ9Y3T9 749 aaKnown RBP20.12■□□□□ 0.81
TNFSF9-201ENST00000245817 C2CD2Q9Y426 696 aa20.12■□□□□ 0.81
TNFSF9-201ENST00000245817 GPR182O15218 404 aa20.11■□□□□ 0.81
TNFSF9-201ENST00000245817 ASS1P00966 412 aaKnown RBP20.11■□□□□ 0.81
TNFSF9-201ENST00000245817 BPIFB4P59827 614 aa20.11■□□□□ 0.81
TNFSF9-201ENST00000245817 NFX1Q12986 1120 aaKnown RBP20.11■□□□□ 0.81
TNFSF9-201ENST00000245817 NAB2Q15742 525 aa20.11■□□□□ 0.81
TNFSF9-201ENST00000245817 ZNF699Q32M78 642 aa20.11■□□□□ 0.81
TNFSF9-201ENST00000245817 TWF2Q6IBS0 349 aaKnown RBP20.11■□□□□ 0.81
TNFSF9-201ENST00000245817 FAM228AQ86W67 206 aa20.11■□□□□ 0.81
TNFSF9-201ENST00000245817 U2AF1L4Q8WU68 220 aaKnown RBP20.11■□□□□ 0.81
TNFSF9-201ENST00000245817 TAF4BQ92750 862 aa20.11■□□□□ 0.81
TNFSF9-201ENST00000245817 SECISBP2LQ93073 1101 aaKnown RBP20.11■□□□□ 0.81
TNFSF9-201ENST00000245817 KIF12Q96FN5 646 aa20.11■□□□□ 0.81
TNFSF9-201ENST00000245817 IRX2Q9BZI1 471 aaPredicted RBP20.11■□□□□ 0.81
TNFSF9-201ENST00000245817 SENP6Q9GZR1 1112 aaPredicted RBP20.11■□□□□ 0.81
TNFSF9-201ENST00000245817 LACRTQ9GZZ8 138 aa20.11■□□□□ 0.81
TNFSF9-201ENST00000245817 APOBEC3GQ9HC16 384 aaKnown RBP20.11■□□□□ 0.81
TNFSF9-201ENST00000245817 TRIM10Q9UDY6 481 aa20.11■□□□□ 0.81
TNFSF9-201ENST00000245817 NAGPAQ9UK23 515 aa20.11■□□□□ 0.81
TNFSF9-201ENST00000245817 NUB1Q9Y5A7 615 aa20.11■□□□□ 0.81
TNFSF9-201ENST00000245817 RCCD1A6NED2 376 aa20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 GLYCTKQ8IVS8 523 aa20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 TFR2Q9UP52 801 aa20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 DERAQ9Y315 318 aa20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 TRIP12Q14669 1992 aaPredicted RBP20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 A0A0U1RQG5 324 aaPredicted RBP20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 MACROD2A1Z1Q3 448 aa20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 DDX3XO00571 662 aaKnown RBP eCLIP20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 PJA2O43164 708 aa20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 SGPL1O95470 568 aa20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 ABL1P00519 1130 aa20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 CHRNA1P02708 482 aa20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 NAP1L1P55209 391 aaKnown RBP20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 DHX38Q92620 1227 aaKnown RBP20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 WNT8BQ93098 351 aa20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 ARMC5Q96C12 935 aa20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 APOL6Q9BWW8 343 aa20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 NIF3L1Q9GZT8 377 aa20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 CHST12Q9NRB3 414 aa20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 TRMT13Q9NUP7 481 aaKnown RBP20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 PARP2Q9UGN5 583 aa20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 ITGA11Q9UKX5 1188 aa20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 ST3GAL5Q9UNP4 418 aa20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 PCDHB4Q9Y5E5 795 aa20.1■□□□□ 0.81
TNFSF9-201ENST00000245817 A0A1W2PQ45 241 aaPredicted RBP20.09■□□□□ 0.81
TNFSF9-201ENST00000245817 A0A1W2PQY0 241 aa20.09■□□□□ 0.81
TNFSF9-201ENST00000245817 MYCP01106 439 aaPredicted RBP20.09■□□□□ 0.81
TNFSF9-201ENST00000245817 ITGB3P05106 788 aa20.09■□□□□ 0.81
TNFSF9-201ENST00000245817 ZSCAN20P17040 1043 aaPredicted RBP20.09■□□□□ 0.81
TNFSF9-201ENST00000245817 ATICP31939 592 aa20.09■□□□□ 0.81
TNFSF9-201ENST00000245817 YWHAEP62258 255 aaKnown RBP20.09■□□□□ 0.81
TNFSF9-201ENST00000245817 HACE1Q8IYU2 909 aa20.09■□□□□ 0.81
TNFSF9-201ENST00000245817 RPUSD2Q8IZ73 545 aaKnown RBP20.09■□□□□ 0.81
TNFSF9-201ENST00000245817 C1orf127Q8N9H9 656 aa20.09■□□□□ 0.81
TNFSF9-201ENST00000245817 ZNF333Q96JL9 665 aa20.09■□□□□ 0.81
TNFSF9-201ENST00000245817 SNX27Q96L92 541 aa20.09■□□□□ 0.81
TNFSF9-201ENST00000245817 WDR24Q96S15 920 aa20.09■□□□□ 0.81
TNFSF9-201ENST00000245817 ARID3AQ99856 593 aa20.09■□□□□ 0.81
TNFSF9-201ENST00000245817 NXF3Q9H4D5 531 aaKnown RBP20.09■□□□□ 0.81
TNFSF9-201ENST00000245817 DPP3Q9NY33 737 aa20.09■□□□□ 0.81
TNFSF9-201ENST00000245817 HES2Q9Y543 173 aa20.09■□□□□ 0.81
TNFSF9-201ENST00000245817 TACC1O75410 805 aa20.08■□□□□ 0.81
TNFSF9-201ENST00000245817 H2AFZP0C0S5 128 aa20.08■□□□□ 0.81
TNFSF9-201ENST00000245817 P4HA1P13674 534 aa20.08■□□□□ 0.81
TNFSF9-201ENST00000245817 CYP11B1P15538 503 aa20.08■□□□□ 0.81
TNFSF9-201ENST00000245817 RBP5P82980 135 aa20.08■□□□□ 0.81
TNFSF9-201ENST00000245817 MGAT3Q09327 533 aa20.08■□□□□ 0.81
TNFSF9-201ENST00000245817 MTFR1Q15390 333 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms