RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 EDN1P05305 212 aa23.42■■□□□ 1.34
RNF39-201ENST00000244360 MYBL1P10243 752 aa23.42■■□□□ 1.34
RNF39-201ENST00000244360 OR2W6PQ8NHA6 318 aa23.42■■□□□ 1.34
RNF39-201ENST00000244360 CNKSR2Q8WXI2 1034 aa23.42■■□□□ 1.34
RNF39-201ENST00000244360 C18orf8Q96DM3 657 aa23.42■■□□□ 1.34
RNF39-201ENST00000244360 TRIM11Q96F44 468 aa23.42■■□□□ 1.34
RNF39-201ENST00000244360 TARS2Q9BW92 718 aaKnown RBP23.42■■□□□ 1.34
RNF39-201ENST00000244360 PPME1Q9Y570 386 aa23.42■■□□□ 1.34
RNF39-201ENST00000244360 CYP1A1P04798 512 aaPredicted RBP23.41■■□□□ 1.34
RNF39-201ENST00000244360 TGFB3P10600 412 aa23.41■■□□□ 1.34
RNF39-201ENST00000244360 GBP1P32455 592 aa23.41■■□□□ 1.34
RNF39-201ENST00000244360 RWDD2BP57060 319 aa23.41■■□□□ 1.34
RNF39-201ENST00000244360 DRP2Q13474 957 aa23.41■■□□□ 1.34
RNF39-201ENST00000244360 CAPSQ13938 189 aa23.41■■□□□ 1.34
RNF39-201ENST00000244360 SIX1Q15475 284 aaPredicted RBP23.41■■□□□ 1.34
RNF39-201ENST00000244360 FAM160B1Q5W0V3 765 aa23.41■■□□□ 1.34
RNF39-201ENST00000244360 MSTO1Q9BUK6 570 aa23.41■■□□□ 1.34
RNF39-201ENST00000244360 CNOT10Q9H9A5 744 aaKnown RBP23.41■■□□□ 1.34
RNF39-201ENST00000244360 CNTNAP2Q9UHC6 1331 aa23.41■■□□□ 1.34
RNF39-201ENST00000244360 GMNCA6NCL1 334 aa23.41■■□□□ 1.34
RNF39-201ENST00000244360 ADCY3O60266 1144 aa23.41■■□□□ 1.34
RNF39-201ENST00000244360 CALCAP01258 141 aa23.41■■□□□ 1.34
RNF39-201ENST00000244360 CENPCQ03188 943 aa23.41■■□□□ 1.34
RNF39-201ENST00000244360 ODF2Q5BJF6 829 aa23.41■■□□□ 1.34
RNF39-201ENST00000244360 ZBTB41Q5SVQ8 909 aa23.41■■□□□ 1.34
RNF39-201ENST00000244360 TTC27Q6P3X3 843 aa23.41■■□□□ 1.34
RNF39-201ENST00000244360 HOOK3Q86VS8 718 aa23.41■■□□□ 1.34
RNF39-201ENST00000244360 CNPY4Q8N129 248 aa23.41■■□□□ 1.34
RNF39-201ENST00000244360 C12orf50Q8NA57 414 aaPredicted RBP23.41■■□□□ 1.34
RNF39-201ENST00000244360 RUNDC3BQ96NL0 473 aa23.41■■□□□ 1.34
RNF39-201ENST00000244360 CNTN6Q9UQ52 1028 aa23.41■■□□□ 1.34
RNF39-201ENST00000244360 CSADQ9Y600 493 aa23.41■■□□□ 1.34
RNF39-201ENST00000244360 MAFO75444 373 aaPredicted RBP23.4■■□□□ 1.34
RNF39-201ENST00000244360 STAT5BP51692 787 aa23.4■■□□□ 1.34
RNF39-201ENST00000244360 CUL2Q13617 745 aa23.4■■□□□ 1.34
RNF39-201ENST00000244360 KCTD19Q17RG1 926 aaPredicted RBP23.4■■□□□ 1.34
RNF39-201ENST00000244360 METTL7BQ6UX53 244 aa23.4■■□□□ 1.34
RNF39-201ENST00000244360 MAGOHBQ96A72 148 aaKnown RBP23.4■■□□□ 1.34
RNF39-201ENST00000244360 TRIM31Q9BZY9 425 aa23.4■■□□□ 1.34
RNF39-201ENST00000244360 APOBEC3GQ9HC16 384 aaKnown RBP23.4■■□□□ 1.34
RNF39-201ENST00000244360 VGLL3A8MV65 326 aa23.4■■□□□ 1.34
RNF39-201ENST00000244360 TRAPPC3O43617 180 aa23.4■■□□□ 1.34
RNF39-201ENST00000244360 SEC24CP53992 1094 aa23.4■■□□□ 1.34
RNF39-201ENST00000244360 ZDHHC24Q6UX98 284 aa23.4■■□□□ 1.34
RNF39-201ENST00000244360 ZPBP2Q6X784 338 aa23.4■■□□□ 1.34
RNF39-201ENST00000244360 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.4■■□□□ 1.34
RNF39-201ENST00000244360 MTUS1Q9ULD2 1270 aa23.4■■□□□ 1.34
RNF39-201ENST00000244360 A0A0G2JLL6 359 aaPredicted RBP23.39■■□□□ 1.34
RNF39-201ENST00000244360 PODXLO00592 558 aa23.39■■□□□ 1.34
RNF39-201ENST00000244360 IRF6O14896 467 aa23.39■■□□□ 1.34
RNF39-201ENST00000244360 PLCB4Q15147 1175 aa23.39■■□□□ 1.34
RNF39-201ENST00000244360 KRT71Q3SY84 523 aa23.39■■□□□ 1.34
RNF39-201ENST00000244360 SPOPLQ6IQ16 392 aa23.39■■□□□ 1.34
RNF39-201ENST00000244360 PRRT2Q7Z6L0 340 aaPredicted RBP23.39■■□□□ 1.34
RNF39-201ENST00000244360 SEPT1Q8WYJ6 367 aa23.39■■□□□ 1.34
RNF39-201ENST00000244360 CYFIP2Q96F07 1278 aa23.39■■□□□ 1.34
RNF39-201ENST00000244360 GRHL1Q9NZI5 618 aa23.39■■□□□ 1.34
RNF39-201ENST00000244360 ANKFY1Q9P2R3 1169 aa23.39■■□□□ 1.34
RNF39-201ENST00000244360 CLTAP09496 248 aa23.39■■□□□ 1.33
RNF39-201ENST00000244360 IFFO1Q0D2I5 559 aa23.39■■□□□ 1.33
RNF39-201ENST00000244360 DLK2Q6UY11 383 aa23.39■■□□□ 1.33
RNF39-201ENST00000244360 TRIM72Q6ZMU5 477 aa23.39■■□□□ 1.33
RNF39-201ENST00000244360 MON1BQ7L1V2 547 aa23.39■■□□□ 1.33
RNF39-201ENST00000244360 NCAPG2Q86XI2 1143 aa23.39■■□□□ 1.33
RNF39-201ENST00000244360 KAT2BQ92831 832 aa23.39■■□□□ 1.33
RNF39-201ENST00000244360 FAM167AQ96KS9 214 aa23.39■■□□□ 1.33
RNF39-201ENST00000244360 PPANQ9NQ55 473 aaKnown RBP23.39■■□□□ 1.33
RNF39-201ENST00000244360 BCCIPQ9P287 314 aaKnown RBP eCLIP23.39■■□□□ 1.33
RNF39-201ENST00000244360 ANAPC7Q9UJX3 599 aa23.39■■□□□ 1.33
RNF39-201ENST00000244360 NOVA2Q9UNW9 492 aaKnown RBP23.39■■□□□ 1.33
RNF39-201ENST00000244360 MROH7Q68CQ1 1323 aa23.39■■□□□ 1.33
RNF39-201ENST00000244360 TCRBV7S2A1N4TA0A589 114 aa23.38■■□□□ 1.33
RNF39-201ENST00000244360 CNMDO75829 334 aa23.38■■□□□ 1.33
RNF39-201ENST00000244360 MAPK4P31152 587 aa23.38■■□□□ 1.33
RNF39-201ENST00000244360 TCF7P36402 384 aaPredicted RBP23.38■■□□□ 1.33
RNF39-201ENST00000244360 FNTAP49354 379 aa23.38■■□□□ 1.33
RNF39-201ENST00000244360 CROCCP2Q86T23 111 aa23.38■■□□□ 1.33
RNF39-201ENST00000244360 CAPN7Q9Y6W3 813 aa23.38■■□□□ 1.33
RNF39-201ENST00000244360 NUDT17P0C025 328 aa23.37■■□□□ 1.33
RNF39-201ENST00000244360 RARAP10276 462 aa23.37■■□□□ 1.33
RNF39-201ENST00000244360 RRM1P23921 792 aa23.37■■□□□ 1.33
RNF39-201ENST00000244360 TBXAS1P24557 533 aaPredicted RBP23.37■■□□□ 1.33
RNF39-201ENST00000244360 COILP38432 576 aaPredicted RBP23.37■■□□□ 1.33
RNF39-201ENST00000244360 CCDC137Q6PK04 289 aaKnown RBP23.37■■□□□ 1.33
RNF39-201ENST00000244360 GADL1Q6ZQY3 521 aa23.37■■□□□ 1.33
RNF39-201ENST00000244360 CCDC113Q9H0I3 377 aa23.37■■□□□ 1.33
RNF39-201ENST00000244360 FSCN2O14926 492 aa23.37■■□□□ 1.33
RNF39-201ENST00000244360 FAM189A1O60320 539 aa23.37■■□□□ 1.33
RNF39-201ENST00000244360 SLC1A1P43005 524 aa23.37■■□□□ 1.33
RNF39-201ENST00000244360 EFNA5P52803 228 aa23.37■■□□□ 1.33
RNF39-201ENST00000244360 GRM1Q13255 1194 aa23.37■■□□□ 1.33
RNF39-201ENST00000244360 CDCA2Q69YH5 1023 aaPredicted RBP23.37■■□□□ 1.33
RNF39-201ENST00000244360 C6orf89Q6UWU4 347 aa23.37■■□□□ 1.33
RNF39-201ENST00000244360 BRSK2Q8IWQ3 736 aa23.37■■□□□ 1.33
RNF39-201ENST00000244360 CPA5Q8WXQ8 436 aa23.37■■□□□ 1.33
RNF39-201ENST00000244360 TLCD1Q96CP7 247 aa23.37■■□□□ 1.33
RNF39-201ENST00000244360 ADARB2Q9NS39 739 aaKnown RBP23.37■■□□□ 1.33
RNF39-201ENST00000244360 PARP2Q9UGN5 583 aa23.37■■□□□ 1.33
RNF39-201ENST00000244360 SNX24Q9Y343 169 aa23.37■■□□□ 1.33
RNF39-201ENST00000244360 NSFP46459 744 aaKnown RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms