RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 SOX10P56693 466 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 SLC44A4Q53GD3 710 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 GALNT17Q6IS24 598 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 TMBIM4Q9HC24 238 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 EPB41L4AQ9HCS5 686 aaPredicted RBP7.91□□□□□ -1.14
RIF1-201ENST00000243326 IGSF1Q8N6C5 1336 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 MYL3P08590 195 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 STX3Q13277 289 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 HACE1Q8IYU2 909 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 SLC7A3Q8WY07 619 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 ZBTB18Q99592 522 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 BRD8Q9H0E9 1235 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 RAB6BQ9NRW1 208 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 CEP170Q5SW79 1584 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 ARHGEF9O43307 516 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 ZMPSTE24O75844 475 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 LIFRP42702 1097 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 TTC8Q8TAM2 541 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 SEPT8Q92599 483 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 TRIM15Q9C019 465 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 RNF19AQ9NV58 838 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 HPS5Q9UPZ3 1129 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 APRTP07741 180 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 HSPA8P11142 646 aaKnown RBP7.91□□□□□ -1.14
RIF1-201ENST00000243326 COL9A3Q14050 684 aaPredicted RBP7.91□□□□□ -1.14
RIF1-201ENST00000243326 DMC1Q14565 340 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 SGSM1Q2NKQ1 1148 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 LOC102724428A0A0B4J2F2 783 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 MED7O43513 233 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 SIK1P57059 783 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 TDRD3Q9H7E2 651 aaKnown RBP7.91□□□□□ -1.14
RIF1-201ENST00000243326 TOPORSQ9NS56 1045 aaPredicted RBP7.91□□□□□ -1.14
RIF1-201ENST00000243326 TAS2R42Q7RTR8 314 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 USP38Q8NB14 1042 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 ARHGEF1Q92888 912 aaKnown RBP7.91□□□□□ -1.14
RIF1-201ENST00000243326 TMEM143Q96AN5 459 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 MTBPQ96DY7 904 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 SHBGP04278 402 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 BGNP21810 368 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 ARHGAP31Q2M1Z3 1444 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 APBA3O96018 575 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 ETFBP38117 255 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 TRADDQ15628 312 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 ACCSLQ4AC99 568 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 TTMPQ5BVD1 217 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 DAB2IPQ5VWQ8 1189 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 CCND1P24385 295 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 GPC3P51654 580 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 LAMB3Q13751 1172 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 ATG9AQ7Z3C6 839 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 CYP4F12Q9HCS2 524 aa7.91□□□□□ -1.14
RIF1-201ENST00000243326 TRIM49D1C9J1S8 452 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 NBNO60934 754 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 CEP55Q53EZ4 464 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 KLC3Q6P597 504 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 TRAF7Q6Q0C0 670 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 DSTYKQ6XUX3 929 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 CLEC17AQ6ZS10 378 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 FAM196AQ6ZSG2 479 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 XXYLT1Q8NBI6 393 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 FAM193BQ96PV7 902 aaPredicted RBP7.9□□□□□ -1.14
RIF1-201ENST00000243326 MYBL2P10244 700 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 RAP1GAPP47736 663 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 CACNA2D1P54289 1103 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 AGBL2Q5U5Z8 902 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 NLRP9Q7RTR0 991 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 AGGF1Q8N302 714 aaeCLIP7.9□□□□□ -1.14
RIF1-201ENST00000243326 RFFLQ8WZ73 363 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 EME1Q96AY2 570 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 TMEM120AQ9BXJ8 343 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 MANSC1Q9H8J5 431 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 EXOSC4Q9NPD3 245 aaKnown RBP7.9□□□□□ -1.14
RIF1-201ENST00000243326 ACSS2Q9NR19 701 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 DTNAQ9Y4J8 743 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 SLC37A4O43826 429 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 SLC18A3Q16572 532 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 SUN2Q9UH99 717 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 TEKT2Q9UIF3 430 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 ERVV-2B6SEH9 535 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 PDGFRBP09619 1106 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 KLRK1P26718 216 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 ZNF200P98182 395 aaPredicted RBP7.9□□□□□ -1.14
RIF1-201ENST00000243326 GRM4Q14833 912 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 TBC1D9BQ66K14 1250 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 RUBCNLQ9H714 662 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 BANF1O75531 89 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 CATSPER2Q96P56 530 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 TMEM206Q9H813 350 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 EPHB2P29323 1055 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 MXD4Q14582 209 aaPredicted RBP7.9□□□□□ -1.14
RIF1-201ENST00000243326 GIPC2Q8TF65 315 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 DCP1AQ9NPI6 582 aaPredicted RBP7.9□□□□□ -1.14
RIF1-201ENST00000243326 ATP11BQ9Y2G3 1177 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 CCDC142Q17RM4 750 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 ZNF667Q5HYK9 610 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 KCNT1Q5JUK3 1230 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 LRIG3Q6UXM1 1119 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 IZUMO2Q6UXV1 221 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 MCF2L2Q86YR7 1114 aa7.9□□□□□ -1.14
RIF1-201ENST00000243326 TASP1Q9H6P5 420 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms