RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 URB1O60287 2271 aaKnown RBP9.23□□□□□ -0.93
IFT43-201ENST00000238628 SPAARA0A1B0GVQ0 90 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 LNP1A1A4G5 178 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 FAM221BA6H8Z2 402 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 H0Y626 953 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 TK2O00142 265 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 CCL16O15467 120 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 MAP3K13O43283 966 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 SLC37A4O43826 429 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 XYLBO75191 536 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 TRIM16O95361 564 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 DEXIO95424 95 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 HNRNPA1P09651 372 aaKnown RBP eCLIP9.23□□□□□ -0.93
IFT43-201ENST00000238628 RPS6KB1P23443 525 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 CCNE1P24864 410 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 PXNP49023 591 aaPredicted RBP9.23□□□□□ -0.93
IFT43-201ENST00000238628 SIM1P81133 766 aaPredicted RBP9.23□□□□□ -0.93
IFT43-201ENST00000238628 POU5F1BQ06416 359 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 TFDP1Q14186 410 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 CTTNQ14247 550 aaKnown RBP9.23□□□□□ -0.93
IFT43-201ENST00000238628 MXD4Q14582 209 aaPredicted RBP9.23□□□□□ -0.93
IFT43-201ENST00000238628 LIN9Q5TKA1 542 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 TANGO2Q6ICL3 276 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 GALNT17Q6IS24 598 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 KRT25Q7Z3Z0 450 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 CEP57Q86XR8 500 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 DAGLBQ8NCG7 672 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 GSTCDQ8NEC7 633 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 IRF7Q92985 503 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 CLSTN3Q9BQT9 956 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 LXNQ9BS40 222 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 TRMT61BQ9BVS5 477 aaKnown RBP9.23□□□□□ -0.93
IFT43-201ENST00000238628 AGXT2Q9BYV1 514 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 SCUBE2Q9NQ36 999 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 RGL1Q9NZL6 768 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 VAV3Q9UKW4 847 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 RAXQ9Y2V3 346 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 SNX14Q9Y5W7 946 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 ARID2Q68CP9 1835 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 WDFY3Q8IZQ1 3526 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 SHROOM3Q8TF72 1996 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 NOTCH4Q99466 2003 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 ZNF462Q96JM2 2506 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 CCDC194A0A1B0GVG4 234 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 CPLX1O14810 134 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 KHNYNO15037 678 aaKnown RBP9.22□□□□□ -0.93
IFT43-201ENST00000238628 ZBTB39O15060 712 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 CDC45O75419 566 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 NPTXRO95502 500 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 C8AP07357 584 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 ARF4P18085 180 aaPredicted RBP9.22□□□□□ -0.93
IFT43-201ENST00000238628 PSMA5P28066 241 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 HSPA4P34932 840 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 EVCP57679 992 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 MBTD1Q05BQ5 628 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 GRIK3Q13003 919 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 HSP90AA2PQ14568 343 aaPredicted RBP9.22□□□□□ -0.93
IFT43-201ENST00000238628 RTP2Q5QGT7 225 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 FAM171A1Q5VUB5 890 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 NCAPH2Q6IBW4 605 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 Q6ZS52 159 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 CDR2LQ86X02 465 aaPredicted RBP9.22□□□□□ -0.93
IFT43-201ENST00000238628 IFNLR1Q8IU57 520 aaPredicted RBP9.22□□□□□ -0.93
IFT43-201ENST00000238628 TPH2Q8IWU9 490 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 LNX1Q8TBB1 728 aaPredicted RBP9.22□□□□□ -0.93
IFT43-201ENST00000238628 ELSPBP1Q96BH3 223 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 DYDC2Q96IM9 177 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 ZC3H10Q96K80 434 aaKnown RBP9.22□□□□□ -0.93
IFT43-201ENST00000238628 TTPALQ9BTX7 342 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 NXF3Q9H4D5 531 aaKnown RBP9.22□□□□□ -0.93
IFT43-201ENST00000238628 ZSWIM4Q9H7M6 989 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 ZNF334Q9HCZ1 680 aaPredicted RBP9.22□□□□□ -0.93
IFT43-201ENST00000238628 KCNMB3Q9NPA1 279 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 C2orf42Q9NWW7 574 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 FBXW11Q9UKB1 542 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 KCNH3Q9ULD8 1083 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 MRPS23Q9Y3D9 190 aaKnown RBP9.22□□□□□ -0.93
IFT43-201ENST00000238628 CACNA1EQ15878 2313 aa9.22□□□□□ -0.93
IFT43-201ENST00000238628 ASCC3Q8N3C0 2202 aaKnown RBP9.21□□□□□ -0.93
IFT43-201ENST00000238628 A0A1B0GUA9 196 aa9.21□□□□□ -0.94
IFT43-201ENST00000238628 CDX4O14627 284 aaPredicted RBP9.21□□□□□ -0.94
IFT43-201ENST00000238628 TBX3O15119 743 aa9.21□□□□□ -0.94
IFT43-201ENST00000238628 CCNT1O60563 726 aaKnown RBP9.21□□□□□ -0.94
IFT43-201ENST00000238628 SLITRK3O94933 977 aa9.21□□□□□ -0.94
IFT43-201ENST00000238628 BAG4O95429 457 aaKnown RBP9.21□□□□□ -0.94
IFT43-201ENST00000238628 CYP4A11Q02928 519 aa9.21□□□□□ -0.94
IFT43-201ENST00000238628 TUSC3Q13454 348 aa9.21□□□□□ -0.94
IFT43-201ENST00000238628 ELF2Q15723 593 aa9.21□□□□□ -0.94
IFT43-201ENST00000238628 NPY5RQ15761 445 aa9.21□□□□□ -0.94
IFT43-201ENST00000238628 PSMD5Q16401 504 aa9.21□□□□□ -0.94
IFT43-201ENST00000238628 AMHR2Q16671 573 aa9.21□□□□□ -0.94
IFT43-201ENST00000238628 UVSSAQ2YD98 709 aa9.21□□□□□ -0.94
IFT43-201ENST00000238628 PLK5Q496M5 336 aa9.21□□□□□ -0.94
IFT43-201ENST00000238628 PABPC1LQ4VXU2 614 aaKnown RBP9.21□□□□□ -0.94
IFT43-201ENST00000238628 PPP4R3AQ6IN85 833 aa9.21□□□□□ -0.94
IFT43-201ENST00000238628 SLC27A1Q6PCB7 646 aa9.21□□□□□ -0.94
IFT43-201ENST00000238628 NEK8Q86SG6 692 aa9.21□□□□□ -0.94
IFT43-201ENST00000238628 ASAP3Q8TDY4 903 aa9.21□□□□□ -0.94
IFT43-201ENST00000238628 HASPINQ8TF76 798 aa9.21□□□□□ -0.94
IFT43-201ENST00000238628 HAS1Q92839 578 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms