RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 MROH7Q68CQ1 1323 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 GSTTP1A0A1W2PQM5 241 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 IPO5O00410 1097 aaKnown RBP16.49■□□□□ 0.23
DDX55-201ENST00000238146 T-ENOLP0DO92 83 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 RALAP11233 206 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 GCAP28676 217 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 MAGEA4P43358 317 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 CENPCQ03188 943 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 DAB2IPQ5VWQ8 1189 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 ZNF365Q70YC5 407 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 RIBC1Q8N443 379 aaPredicted RBP16.49■□□□□ 0.23
DDX55-201ENST00000238146 CCDC89Q8N998 374 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 SLC7A6OSQ96CW6 309 aaPredicted RBP16.49■□□□□ 0.23
DDX55-201ENST00000238146 SAAL1Q96ER3 474 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 ZDHHC15Q96MV8 337 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.49■□□□□ 0.23
DDX55-201ENST00000238146 EIF4E1BA6NMX2 242 aaKnown RBP16.49■□□□□ 0.23
DDX55-201ENST00000238146 DDX39AO00148 427 aaKnown RBP16.49■□□□□ 0.23
DDX55-201ENST00000238146 PPEF1O14829 653 aaPredicted RBP16.49■□□□□ 0.23
DDX55-201ENST00000238146 TPBGLP0DKB5 382 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 GYS1P13807 737 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 PEX19P40855 299 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 KRT39Q6A163 491 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 HAUS6Q7Z4H7 955 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 PHLDB2Q86SQ0 1253 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 BBOF1Q8ND07 529 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 STK32AQ8WU08 396 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 INPP5DQ92835 1189 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 CCDC127Q96BQ5 260 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 RBM15Q96T37 977 aaKnown RBP eCLIP16.49■□□□□ 0.231e-7■■□□□ 13.4
DDX55-201ENST00000238146 CYP39A1Q9NYL5 469 aa16.49■□□□□ 0.23
DDX55-201ENST00000238146 ABHD2P08910 425 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 LINGO3P0C6S8 592 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 PLS3P13797 630 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 GTF2BQ00403 316 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 CCNG2Q16589 344 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 GRIPAP1Q4V328 841 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 KIFAP3Q92845 792 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 TBC1D10AQ9BXI6 508 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 ZFATQ9P243 1243 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 GRID1Q9ULK0 1009 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 COQ4Q9Y3A0 265 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 ATRNL1Q5VV63 1379 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 ZNFX1Q9P2E3 1918 aaKnown RBP16.48■□□□□ 0.23
DDX55-201ENST00000238146 GH2P01242 217 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 VIL1P09327 827 aaKnown RBP16.48■□□□□ 0.23
DDX55-201ENST00000238146 SLC1A1P43005 524 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 GPC3P51654 580 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 RAD23BP54727 409 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 TRIM68Q6AZZ1 485 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 LLGL2Q6P1M3 1020 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 RGS9BPQ6ZS82 235 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 MCOLN2Q8IZK6 566 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 TAS1R2Q8TE23 839 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 OSBPL1AQ9BXW6 950 aa16.48■□□□□ 0.23
DDX55-201ENST00000238146 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.48■□□□□ 0.23
DDX55-201ENST00000238146 EXOC1LA0A1B0GW35 172 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 E7ENQ6 273 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 UNGP13051 313 aaPredicted RBP16.47■□□□□ 0.23
DDX55-201ENST00000238146 ADSSP30520 456 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 MCCD1P59942 119 aaPredicted RBP16.47■□□□□ 0.23
DDX55-201ENST00000238146 SPARCL1Q14515 664 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 SNRNP35Q16560 246 aaKnown RBP16.47■□□□□ 0.23
DDX55-201ENST00000238146 TBC1D10BQ4KMP7 808 aaPredicted RBP16.47■□□□□ 0.23
DDX55-201ENST00000238146 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.47■□□□□ 0.23
DDX55-201ENST00000238146 PARD3BQ8TEW8 1205 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 NT5C1BQ96P26 610 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 IDI2Q9BXS1 227 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 KIAA1586Q9HCI6 787 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 UBN1Q9NPG3 1134 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 KIF3CO14782 793 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 PRPF4O43172 522 aaKnown RBP eCLIP16.47■□□□□ 0.23
DDX55-201ENST00000238146 EDF1O60869 148 aaKnown RBP16.47■□□□□ 0.23
DDX55-201ENST00000238146 DCTN3O75935 186 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 FDX1P10109 184 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 KLRC2P26717 231 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 STAT2P52630 851 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 C2CD6Q53TS8 623 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 ANO7Q6IWH7 933 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 ZNF449Q6P9G9 518 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 CCDC174Q6PII3 467 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 LONP2Q86WA8 852 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 ZCCHC9Q8N567 271 aaKnown RBP16.47■□□□□ 0.23
DDX55-201ENST00000238146 TEX9Q8N6V9 391 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 NUDCD1Q96RS6 583 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 SH2D3AQ9BRG2 576 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 TRABDQ9H4I3 376 aa16.47■□□□□ 0.23
DDX55-201ENST00000238146 AVENQ9NQS1 362 aaPredicted RBP16.47■□□□□ 0.23
DDX55-201ENST00000238146 TOPORSQ9NS56 1045 aaPredicted RBP16.47■□□□□ 0.23
DDX55-201ENST00000238146 SLC16A4O15374 487 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 EPHB2P29323 1055 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 ALDH3A1P30838 453 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 RARRES1P49788 294 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 NR1H3Q13133 447 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 PKN2Q16513 984 aaKnown RBP16.46■□□□□ 0.23
DDX55-201ENST00000238146 PDK4Q16654 411 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 P3H1Q32P28 736 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 C10orf82Q8WW14 230 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 CFAP57Q96MR6 1250 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 TMEM8AQ9HCN3 771 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms