RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 SCARA3Q6AZY7 606 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 GLB1LQ6UWU2 654 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 GBP6Q6ZN66 633 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 OTOP2Q7RTS6 562 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 RNF169Q8NCN4 708 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 EHBP1Q8NDI1 1231 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 SEMA4DQ92854 862 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 ZNF689Q96CS4 500 aaPredicted RBP15.16■□□□□ 0.02
SEC61B-201ENST00000223641 CASD1Q96PB1 797 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 RPS6KC1Q96S38 1066 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 LBHD1Q9BQE6 289 aaPredicted RBP15.16■□□□□ 0.02
SEC61B-201ENST00000223641 MMRN2Q9H8L6 949 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 RC3H2Q9HBD1 1191 aaKnown RBP15.16■□□□□ 0.02
SEC61B-201ENST00000223641 SLC38A7Q9NVC3 462 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 RAB20Q9NX57 234 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 DPP3Q9NY33 737 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 SIX4Q9UIU6 781 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 ITGA11Q9UKX5 1188 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 ITIH6Q6UXX5 1313 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 PES1O00541 588 aaKnown RBP15.15■□□□□ 0.02
SEC61B-201ENST00000223641 AMHP03971 560 aa15.15■□□□□ 0.02
SEC61B-201ENST00000223641 SLC9A1P19634 815 aa15.15■□□□□ 0.02
SEC61B-201ENST00000223641 PON1P27169 355 aa15.15■□□□□ 0.02
SEC61B-201ENST00000223641 DEFB103AP81534 67 aa15.15■□□□□ 0.02
SEC61B-201ENST00000223641 DSC1Q08554 894 aa15.15■□□□□ 0.02
SEC61B-201ENST00000223641 CETN1Q12798 172 aa15.15■□□□□ 0.02
SEC61B-201ENST00000223641 SYCP1Q15431 976 aa15.15■□□□□ 0.02
SEC61B-201ENST00000223641 NOMO2Q5JPE7 1267 aa15.15■□□□□ 0.02
SEC61B-201ENST00000223641 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.15■□□□□ 0.02
SEC61B-201ENST00000223641 VSTM4Q8IW00 320 aa15.15■□□□□ 0.02
SEC61B-201ENST00000223641 BEST2Q8NFU1 509 aa15.15■□□□□ 0.02
SEC61B-201ENST00000223641 HELQQ8TDG4 1101 aa15.15■□□□□ 0.02
SEC61B-201ENST00000223641 C18orf25Q96B23 403 aaPredicted RBP15.15■□□□□ 0.02
SEC61B-201ENST00000223641 XYLT2Q9H1B5 865 aa15.15■□□□□ 0.02
SEC61B-201ENST00000223641 VRTNQ9H8Y1 702 aa15.15■□□□□ 0.02
SEC61B-201ENST00000223641 PLCB1Q9NQ66 1216 aa15.15■□□□□ 0.02
SEC61B-201ENST00000223641 KANSL3Q9P2N6 904 aa15.15■□□□□ 0.02
SEC61B-201ENST00000223641 TUBGCP4Q9UGJ1 667 aa15.15■□□□□ 0.02
SEC61B-201ENST00000223641 LRFN2Q9ULH4 789 aa15.15■□□□□ 0.02
SEC61B-201ENST00000223641 PIRO00625 290 aa15.14■□□□□ 0.01
SEC61B-201ENST00000223641 ZC3H11AO75152 810 aaKnown RBP eCLIP15.14■□□□□ 0.01
SEC61B-201ENST00000223641 LRRN2O75325 713 aa15.14■□□□□ 0.01
SEC61B-201ENST00000223641 STAU1O95793 577 aaKnown RBP15.14■□□□□ 0.01
SEC61B-201ENST00000223641 ASS1P00966 412 aaKnown RBP15.14■□□□□ 0.01
SEC61B-201ENST00000223641 HLA-DRAP01903 254 aa15.14■□□□□ 0.01
SEC61B-201ENST00000223641 ITGB3P05106 788 aa15.14■□□□□ 0.01
SEC61B-201ENST00000223641 NCOA4Q13772 614 aa15.14■□□□□ 0.01
SEC61B-201ENST00000223641 FIGNQ5HY92 759 aa15.14■□□□□ 0.01
SEC61B-201ENST00000223641 TRIM65Q6PJ69 517 aa15.14■□□□□ 0.01
SEC61B-201ENST00000223641 CRACR2AQ9BSW2 395 aa15.14■□□□□ 0.01
SEC61B-201ENST00000223641 TTYH3Q9C0H2 523 aa15.14■□□□□ 0.01
SEC61B-201ENST00000223641 SIX2Q9NPC8 291 aa15.14■□□□□ 0.01
SEC61B-201ENST00000223641 TBC1D13Q9NVG8 400 aa15.14■□□□□ 0.01
SEC61B-201ENST00000223641 GCNT4Q9P109 453 aa15.14■□□□□ 0.01
SEC61B-201ENST00000223641 SCN1AP35498 2009 aa15.14■□□□□ 0.01
SEC61B-201ENST00000223641 NOL4O94818 638 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 DDHD2O94830 711 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 POMCP01189 267 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 ATICP31939 592 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 RPL9P32969 192 aaKnown RBP15.13■□□□□ 0.01
SEC61B-201ENST00000223641 KCNJ6P48051 423 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 KLK7P49862 253 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 GUCY2FP51841 1108 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 RBP5P82980 135 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 TUSC3Q13454 348 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 BIRC3Q13489 604 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 PTPN21Q16825 1174 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 SGSM1Q2NKQ1 1148 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 C9orf57Q5W0N0 161 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 SPECC1LQ69YQ0 1117 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 TMEM130Q8N3G9 435 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 LRRC52Q8N7C0 313 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 PHOSPHO2Q8TCD6 241 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 URGCPQ8TCY9 931 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 TAF4BQ92750 862 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 FAXDC2Q96IV6 333 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 PDLIM2Q96JY6 352 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 INTS2Q9H0H0 1204 aaKnown RBP15.13■□□□□ 0.01
SEC61B-201ENST00000223641 CXXC1Q9P0U4 656 aaPredicted RBP15.13■□□□□ 0.01
SEC61B-201ENST00000223641 FBXL5Q9UKA1 691 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 INPP5FQ9Y2H2 1132 aa15.13■□□□□ 0.01
SEC61B-201ENST00000223641 TNRC18O15417 2968 aaPredicted RBP15.12■□□□□ 0.01
SEC61B-201ENST00000223641 PHACTR2O75167 634 aa15.12■□□□□ 0.01
SEC61B-201ENST00000223641 UPP2O95045 317 aa15.12■□□□□ 0.01
SEC61B-201ENST00000223641 IBSPP21815 317 aaPredicted RBP15.12■□□□□ 0.01
SEC61B-201ENST00000223641 POLR2BP30876 1174 aaKnown RBP15.12■□□□□ 0.01
SEC61B-201ENST00000223641 PIK3CAP42336 1068 aa15.12■□□□□ 0.01
SEC61B-201ENST00000223641 MAGEA10P43363 369 aaPredicted RBP15.12■□□□□ 0.01
SEC61B-201ENST00000223641 GATMP50440 423 aa15.12■□□□□ 0.01
SEC61B-201ENST00000223641 MYL6P60660 151 aa15.12■□□□□ 0.01
SEC61B-201ENST00000223641 HTRA4P83105 476 aaPredicted RBP15.12■□□□□ 0.01
SEC61B-201ENST00000223641 TBX2Q13207 712 aaPredicted RBP15.12■□□□□ 0.01
SEC61B-201ENST00000223641 UPP1Q16831 310 aa15.12■□□□□ 0.01
SEC61B-201ENST00000223641 KLHDC7AQ5VTJ3 777 aa15.12■□□□□ 0.01
SEC61B-201ENST00000223641 PHLDB3Q6NSJ2 640 aa15.12■□□□□ 0.01
SEC61B-201ENST00000223641 ZNF280BQ86YH2 543 aa15.12■□□□□ 0.01
SEC61B-201ENST00000223641 COLGALT2Q8IYK4 626 aa15.12■□□□□ 0.01
SEC61B-201ENST00000223641 ABI1Q8IZP0 508 aa15.12■□□□□ 0.01
SEC61B-201ENST00000223641 IQCDQ96DY2 449 aa15.12■□□□□ 0.01
SEC61B-201ENST00000223641 UROC1Q96N76 676 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms