RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 LAMA4Q16363 1823 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 SAT1P21673 171 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 NUP107P57740 925 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 DYNLT1P63172 113 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 ABI1Q8IZP0 508 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 ANKS1AQ92625 1134 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 USP6NLQ92738 828 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 KRT82Q9NSB4 513 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 SYNPO2Q9UMS6 1093 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 SUFUQ9UMX1 484 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 IGF2BP3O00425 579 aaKnown RBP eCLIP4.64□□□□□ -1.67
CHD9-201ENST00000219084 ABLIM1O14639 778 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 FKBP6O75344 327 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 KCNA3P22001 575 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 STIP1P31948 543 aaKnown RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 RANBP1P43487 201 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 MAPK7Q13164 816 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 FLOT2Q14254 428 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 TTLL4Q14679 1199 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 PDK1Q15118 436 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 CEP55Q53EZ4 464 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 OR6B2Q6IFH4 312 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 C16orf86Q6ZW13 317 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 RAB42Q8N4Z0 105 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 RASGRP4Q8TDF6 673 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 SKA2Q8WVK7 121 aaPredicted RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 ABTB1Q969K4 478 aaPredicted RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 IFT43Q96FT9 208 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 RAB21Q9UL25 225 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 TRPC5Q9UL62 973 aaPredicted RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 GJA3Q9Y6H8 435 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 SPATA31A3Q5VYP0 1347 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 LIN7AO14910 233 aaPredicted RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 POLBP06746 335 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 SNRPAP09012 282 aaKnown RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 USP17L8P0C7I0 530 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 SPRP35270 261 aaPredicted RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 PSMC1P62191 440 aaKnown RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 ZYXQ15942 572 aaKnown RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 ANKRD40Q6AI12 368 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 NCLNQ969V3 563 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 LRRC1Q9BTT6 524 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 PLEKHA4Q9H4M7 779 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 JPH1Q9HDC5 661 aaPredicted RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 SORCS3Q9UPU3 1222 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 STARD13Q9Y3M8 1113 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 EMSYQ7Z589 1322 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 PRR36Q9H6K5 1346 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 RNF103-CHMP3A0A140T963 221 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 USP17L5A8MUK1 530 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 HNRNPCL2B2RXH8 293 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 M0R3G1 203 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 MYL2P10916 166 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 MCL1Q07820 350 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 NCAPHQ15003 741 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 KYNUQ16719 465 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 WASHC2DQ5SRD0 308 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 NCAPG2Q86XI2 1143 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 ATXN2LQ8WWM7 1075 aaKnown RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 RSPH1Q8WYR4 309 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 DYDC2Q96IM9 177 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 KIAA1257Q9ULG3 409 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 NEU2Q9Y3R4 380 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 TRIM49BA6NDI0 452 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 USP27XA6NNY8 438 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 PSMA4P25789 261 aaKnown RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 ZNF135P52742 658 aaPredicted RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 PEX3P56589 373 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 PDK2Q15119 407 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 E2F4Q16254 413 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 HORMAD1Q86X24 394 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 PALB2Q86YC2 1186 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 CROCCP3Q8IVE0 287 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 CD302Q8IX05 232 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 TPCN2Q8NHX9 752 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 RMDN3Q96TC7 470 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 RIT2Q99578 217 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 MANSC1Q9H8J5 431 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 ANKEF1Q9NU02 776 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 SLC38A7Q9NVC3 462 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 RBAKQ9NYW8 714 aaPredicted RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 HDAC6Q9UBN7 1215 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 BAZ2AQ9UIF9 1905 aaKnown RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 COBLO75128 1261 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 PRR29P0C7W0 189 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 CYP2C8P10632 490 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 YWHABP31946 246 aaKnown RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 COPAP53621 1224 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 DYNLL1P63167 89 aaKnown RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 CSTF3Q12996 717 aaKnown RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 MRPL28Q13084 256 aaKnown RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 STX5Q13190 355 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 PTK6Q13882 451 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 GADL1Q6ZQY3 521 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 TBC1D19Q8N5T2 526 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 URGCPQ8TCY9 931 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 DACT3Q96B18 629 aaPredicted RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 C18orf8Q96DM3 657 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 MAGED4Q96JG8 741 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 CCDC28BQ9BUN5 200 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms