RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 GIT1Q9Y2X7 761 aa20.76■□□□□ 0.91
TRAPPC6A-201ENST00000006275 CACNA1GO43497 2377 aa20.76■□□□□ 0.91
TRAPPC6A-201ENST00000006275 MIA3Q5JRA6 1907 aa20.76■□□□□ 0.91
TRAPPC6A-201ENST00000006275 MTCL1Q9Y4B5 1905 aaKnown RBP20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 CCDC169A6NNP5 214 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 PRR5-ARHGAP8B1AHC4 643 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 SPTLC2O15270 562 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 B4GALT5O43286 388 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 TADA2AO75478 443 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 YEATS4O95619 227 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 LIG1P18858 919 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 MAGEA9P43362 315 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 PEX3P56589 373 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 ARHGAP8P85298 464 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 RAD51AP2Q09MP3 1159 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 MAPK7Q13164 816 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 DMP1Q13316 513 aaPredicted RBP20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 DHX8Q14562 1220 aaKnown RBP20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 MAPK6Q16659 721 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 PPM1LQ5SGD2 360 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 PPP4R3CPQ6ZMV5 832 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 DAW1Q8N136 415 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 RAD54LQ92698 747 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 FGF13Q92913 245 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 PRIMPOLQ96LW4 560 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 KIFC3Q9BVG8 833 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 FZD8Q9H461 694 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 NXF3Q9H4D5 531 aaKnown RBP20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 LTB4R2Q9NPC1 389 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 KCND2Q9NZV8 630 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 DAXXQ9UER7 740 aaPredicted RBP20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 USP18Q9UMW8 372 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 POLIQ9UNA4 740 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 DOCK6Q96HP0 2047 aa20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 MAP1BP46821 2468 aaKnown RBP20.75■□□□□ 0.91
TRAPPC6A-201ENST00000006275 CHD8Q9HCK8 2581 aa20.74■□□□□ 0.91
TRAPPC6A-201ENST00000006275 PPP6R2O75170 966 aa20.74■□□□□ 0.91
TRAPPC6A-201ENST00000006275 PRKCBP05771 671 aa20.74■□□□□ 0.91
TRAPPC6A-201ENST00000006275 HNRNPA1P09651 372 aaKnown RBP eCLIP20.74■□□□□ 0.91
TRAPPC6A-201ENST00000006275 CD72P21854 359 aa20.74■□□□□ 0.91
TRAPPC6A-201ENST00000006275 MCM6Q14566 821 aa20.74■□□□□ 0.91
TRAPPC6A-201ENST00000006275 FAM187BQ17R55 369 aa20.74■□□□□ 0.91
TRAPPC6A-201ENST00000006275 TMEM132AQ24JP5 1023 aa20.74■□□□□ 0.91
TRAPPC6A-201ENST00000006275 RTP2Q5QGT7 225 aa20.74■□□□□ 0.91
TRAPPC6A-201ENST00000006275 ZBTB41Q5SVQ8 909 aa20.74■□□□□ 0.91
TRAPPC6A-201ENST00000006275 RSPO2Q6UXX9 243 aaPredicted RBP20.74■□□□□ 0.91
TRAPPC6A-201ENST00000006275 ZBTB44Q8NCP5 570 aa20.74■□□□□ 0.91
TRAPPC6A-201ENST00000006275 LRRC15Q8TF66 581 aa20.74■□□□□ 0.91
TRAPPC6A-201ENST00000006275 KXD1Q9BQD3 176 aa20.74■□□□□ 0.91
TRAPPC6A-201ENST00000006275 C17orf75Q9HAS0 396 aa20.74■□□□□ 0.91
TRAPPC6A-201ENST00000006275 BLOC1S4Q9NUP1 217 aa20.74■□□□□ 0.91
TRAPPC6A-201ENST00000006275 SF3B1O75533 1304 aaKnown RBP eCLIP20.74■□□□□ 0.914e-7■■■■■ 86.2
TRAPPC6A-201ENST00000006275 COL4A3Q01955 1670 aa20.73■□□□□ 0.91
TRAPPC6A-201ENST00000006275 SFI1A8K8P3 1242 aa20.73■□□□□ 0.91
TRAPPC6A-201ENST00000006275 CCL16O15467 120 aa20.73■□□□□ 0.91
TRAPPC6A-201ENST00000006275 XYLBO75191 536 aa20.73■□□□□ 0.91
TRAPPC6A-201ENST00000006275 C8AP07357 584 aa20.73■□□□□ 0.91
TRAPPC6A-201ENST00000006275 AKAP5P24588 427 aa20.73■□□□□ 0.91
TRAPPC6A-201ENST00000006275 NPTX2P47972 431 aa20.73■□□□□ 0.91
TRAPPC6A-201ENST00000006275 EFNA5P52803 228 aa20.73■□□□□ 0.91
TRAPPC6A-201ENST00000006275 GRIK3Q13003 919 aa20.73■□□□□ 0.91
TRAPPC6A-201ENST00000006275 ATL3Q6DD88 541 aa20.73■□□□□ 0.91
TRAPPC6A-201ENST00000006275 GPBP1Q86WP2 473 aa20.73■□□□□ 0.91
TRAPPC6A-201ENST00000006275 CDR2LQ86X02 465 aaPredicted RBP20.73■□□□□ 0.91
TRAPPC6A-201ENST00000006275 LARP4BQ92615 738 aaKnown RBP20.73■□□□□ 0.91
TRAPPC6A-201ENST00000006275 CCDC113Q9H0I3 377 aa20.73■□□□□ 0.91
TRAPPC6A-201ENST00000006275 EPC1Q9H2F5 836 aa20.73■□□□□ 0.91
TRAPPC6A-201ENST00000006275 KMT5AQ9NQR1 393 aa20.73■□□□□ 0.91
TRAPPC6A-201ENST00000006275 MYH11P35749 1972 aa20.73■□□□□ 0.91
TRAPPC6A-201ENST00000006275 NPHP3-ACAD11A0A0J9YXS1 232 aa20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 A0A1B0GUA9 196 aa20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 DCDC2BA2VCK2 349 aa20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 DDIT3P35638 169 aa20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 CACNB1Q02641 598 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 PRPF4BQ13523 1007 aaKnown RBP20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 HSP90AA2PQ14568 343 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 ARSHQ5FYA8 562 aa20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 RRAGBQ5VZM2 374 aa20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 SLC27A1Q6PCB7 646 aa20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 TPRG1Q6ZUI0 275 aa20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 GSTCDQ8NEC7 633 aa20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 ITFG1Q8TB96 612 aa20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 HASPINQ8TF76 798 aa20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 RTKNQ9BST9 563 aa20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 TTPALQ9BTX7 342 aa20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 KLK14Q9P0G3 267 aa20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 CACNG4Q9UBN1 327 aa20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 STK17AQ9UEE5 414 aa20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 PARP2Q9UGN5 583 aa20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 KCNG1Q9UIX4 513 aa20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 GMEB2Q9UKD1 530 aa20.72■□□□□ 0.91
TRAPPC6A-201ENST00000006275 TDRD15B5MCY1 1934 aaKnown RBP20.71■□□□□ 0.91
TRAPPC6A-201ENST00000006275 K7ERI5 159 aa20.71■□□□□ 0.91
TRAPPC6A-201ENST00000006275 ACKR2O00590 384 aa20.71■□□□□ 0.91
TRAPPC6A-201ENST00000006275 N4BP3O15049 544 aa20.71■□□□□ 0.91
TRAPPC6A-201ENST00000006275 NCAM2O15394 837 aa20.71■□□□□ 0.91
TRAPPC6A-201ENST00000006275 LILRB5O75023 590 aa20.71■□□□□ 0.91
TRAPPC6A-201ENST00000006275 NPTXRO95502 500 aa20.71■□□□□ 0.91
TRAPPC6A-201ENST00000006275 PLS3P13797 630 aa20.71■□□□□ 0.91
TRAPPC6A-201ENST00000006275 HOXA9P31269 272 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms