RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 SHC3Q92529 594 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 PI4K2AQ9BTU6 479 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 DCLK3Q9C098 648 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 PRKAG3Q9UGI9 489 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 ADAMTSL1Q8N6G6 1762 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 POC1B-GALNT4F8VUJ3 575 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 CDH16O75309 829 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 TAC1P20366 129 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 IL9RQ01113 521 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 PTK6Q13882 451 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 MYBPC2Q14324 1141 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 MTFR1Q15390 333 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 IZUMO3Q5VZ72 239 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 ACAD10Q6JQN1 1059 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 DEFB132Q7Z7B7 95 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 ATL2Q8NHH9 583 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 ACER1Q8TDN7 264 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 TAS1R2Q8TE23 839 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 GRK7Q8WTQ7 553 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 SPOCK2Q92563 424 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 ERP27Q96DN0 273 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 ZDHHC15Q96MV8 337 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 NT5C1BQ96P26 610 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 TMEM237Q96Q45 408 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 YIPF3Q9GZM5 350 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 TDRD3Q9H7E2 651 aaKnown RBP11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 ARHGEF10LQ9HCE6 1279 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 USTQ9Y2C2 406 aa11.19□□□□□ -0.62
CX3CL1-201ENST00000006053 RALAP11233 206 aa11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 ADRA2BP18089 450 aa11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 TARSP26639 723 aaKnown RBP11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 SETDB1Q15047 1291 aa11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 ANKRD20A2Q5SQ80 823 aa11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 ANKRD20A1Q5TYW2 823 aa11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 ANKRD20A3Q5VUR7 823 aa11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 TRIM68Q6AZZ1 485 aa11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 KIFAP3Q92845 792 aa11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 KIFC3Q9BVG8 833 aa11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 MYLK2Q9H1R3 596 aa11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 SSTR3P32745 418 aaPredicted RBP11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 RANBP1P43487 201 aa11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 RNASELQ05823 741 aaKnown RBP11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 MKRN3Q13064 507 aaKnown RBP11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 SNRNP35Q16560 246 aaKnown RBP11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 TBC1D25Q3MII6 688 aa11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 KRT39Q6A163 491 aa11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 ZNF449Q6P9G9 518 aa11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 PPP1R21Q6ZMI0 780 aa11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 ASRGL1Q7L266 308 aa11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 ANKLE1Q8NAG6 615 aa11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 EHMT1Q9H9B1 1298 aa11.18□□□□□ -0.62
CX3CL1-201ENST00000006053 UNC5CO95185 931 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 PLS3P13797 630 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 WDR4P57081 412 aaKnown RBP11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 TAF11Q15544 211 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 RNF43Q68DV7 783 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 ANKRD35Q8N283 1001 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 HELQQ8TDG4 1101 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 TMX4Q9H1E5 349 aaPredicted RBP11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 SLCO1B3Q9NPD5 702 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 BATF3Q9NR55 127 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 SLC5A4Q9NY91 659 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 HAO1Q9UJM8 370 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 ZHX2Q9Y6X8 837 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 EXOC1LA0A1B0GW35 172 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 FAM47DPA6NHR8 397 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 USP4Q13107 963 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 FAM102BQ5T8I3 360 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 C7orf43Q8WVR3 580 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 MAIP1Q8WWC4 291 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 SLCO2A1Q92959 643 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 RAB3IPQ96QF0 476 aaPredicted RBP11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 RBM15Q96T37 977 aaKnown RBP eCLIP11.17□□□□□ -0.626e-9■■□□□ 12.8
CX3CL1-201ENST00000006053 SUDS3Q9H7L9 328 aaPredicted RBP11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 SAYSD1Q9NPB0 183 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 KLHL11Q9NVR0 708 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 ZNF831Q5JPB2 1677 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 VIL1P09327 827 aaKnown RBP11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 KRT15P19012 456 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 MAN1A1P33908 653 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 RARRES1P49788 294 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 PDCD2Q16342 344 aaPredicted RBP11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 CLEC16AQ2KHT3 1053 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 C1QTNF12Q5T7M4 302 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 C4orf33Q8N1A6 199 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 CSRNP1Q96S65 589 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 TXLNGQ9NUQ3 528 aa11.17□□□□□ -0.62
CX3CL1-201ENST00000006053 BTAF1O14981 1849 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 SORBS3O60504 671 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 COQ9O75208 318 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 P4HBP07237 508 aaKnown RBP11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 CD58P19256 250 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 MUTP22033 750 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 MAGEA4P43358 317 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 CAV1Q03135 178 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 STAT4Q14765 748 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 KAZNQ674X7 775 aa11.16□□□□□ -0.62
CX3CL1-201ENST00000006053 SYDE1Q6ZW31 735 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms