RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Dnm1P39053 867 aa9.69□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gbp10Q000W5 611 aa9.69□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Rasip1Q3U0S6 961 aa9.69□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Fam35aQ3UEN2 891 aa9.69□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Bbof1Q3V079 533 aa9.69□□□□□ -0.86
Upf3b-201ENSMUST00000076265 CpQ61147 1061 aa9.69□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Krt74Q6IFZ9 495 aa9.69□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Thoc7Q7TMY4 204 aaKnown RBP9.69□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Tbl3Q8C4J7 801 aaKnown RBP9.69□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Olfr459Q924H8 314 aa9.69□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Txnrd3Q99MD6 652 aa9.69□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Col22a1E9Q7P1 1613 aa9.69□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Glipr1l3A0A1W2P7V2 236 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Usp51B1AY15 661 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 4933408B17RikG3X9B4 273 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Olfr117L7N1Z1 317 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Sod2P09671 222 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gna13P27601 377 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Slc16a1P53986 493 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Spata18Q0P557 537 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Fam83bQ0VBM2 1012 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 E330014E10RikQ3UL33 481 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Plcl1Q3USB7 1096 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 D5Ertd577eQ499F0 481 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Utp14bQ6EJB6 756 aaKnown RBP9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 ScocQ78YZ6 125 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Phf20Q8BLG0 1010 aaKnown RBP9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ccdc15Q8C9M2 810 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Cdc123Q8CII2 336 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Slc5a9Q8VDT1 685 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Fam114a2Q8VE88 497 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Olfr130Q8VFC1 317 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 TbcbQ9D1E6 244 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ptp4a3Q9D658 173 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Llcfc1Q9D9P8 108 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Rnf125Q9D9R0 233 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Tex22Q9D9U4 189 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Sun5Q9DA32 373 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Popdc2Q9ES82 367 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Nqo2Q9JI75 231 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Aldh18a1Q9Z110 795 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Krt27Q9Z320 448 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ccdc183A2AJB1 534 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Palm3A2TJV2 734 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ccdc6D3YZP9 469 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 SpibO35906 267 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Cfdp1O88271 295 aaKnown RBP9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Tgfb3P17125 410 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Mcm5P49718 733 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 FanccP50652 591 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Tmem232Q5K6N0 675 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Foxd4Q60688 444 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Olfr320Q7TRZ4 306 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Tmem169Q8BG50 297 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Map2k7Q8CE90 535 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Slc35b4Q8CIA5 331 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Socs7Q8VHQ2 579 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Plcb4Q91UZ1 1175 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Rbm42Q91V81 474 aaKnown RBP9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Cdca5Q9CPY3 264 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Mxra7Q9CZH7 178 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Cpsf3Q9QXK7 684 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Stxbp4Q9WV89 557 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Znf394Q9Z1D9 521 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Slc22a4Q9Z306 553 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Plekhg2Q6KAU7 1340 aa9.68□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Zscan20B2KFW1 1030 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 C87414E9PWI7 475 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Scgb1b2O35176 93 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 TP20293 436 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Scg3P47867 471 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 GckP52792 465 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Rrp1P56183 494 aaKnown RBP9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Plscr4P58196 326 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Pak3Q61036 559 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Exoc3Q6KAR6 755 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Nudcd1Q6PIP5 582 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Zfp397Q7TNK4 527 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ccdc17Q8CE13 565 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Snx30Q8CE50 437 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Snx8Q8CFD4 459 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Tbc1d14Q8CGA2 694 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ift80Q8K057 777 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Lurap1lQ8K2P1 221 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Atp6v0bQ91V37 205 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Dnajc17Q91WT4 303 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Sec16bQ91XT4 1051 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ankrd39Q9D2X0 183 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Mrpl12Q9DB15 201 aaKnown RBP9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Taf8Q9EQH4 308 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Stx6Q9JKK1 255 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Nufip1Q9QXX8 484 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Scnn1bQ9WU38 638 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Fer1l6E0CZ42 1862 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Cacna1sQ02789 1880 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Chd4Q6PDQ2 1915 aaKnown RBP9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Fam129cD3YZB0 591 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Tgfbr3lD3YZZ2 297 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gcnt4E9Q649 455 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gm3371F7CQW8 167 aa9.67□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms