RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Rnf113a2Q14B01 337 aa8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Q3TTJ4 293 aa8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 DeptorQ570Y9 409 aa8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Ddx5Q61656 614 aaKnown RBP8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Zbtb7bQ64321 544 aa8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Tbc1d12Q6A039 696 aa8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Trim17Q7TPM3 477 aa8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Rnf168Q80XJ2 565 aa8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Pnma2Q8BHK0 365 aa8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Actrt1Q9D9J3 376 aa8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Sgf29Q9DA08 293 aaKnown RBP8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 RpgrQ9R0X5 1001 aa8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Gbp2Q9Z0E6 589 aa8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Sh3tc1G3X9F6 1346 aa8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Gja8P28236 440 aa8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Aimp1P31230 310 aaKnown RBP8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 AaasP58742 546 aa8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Fgfr4Q03142 799 aa8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Larp7Q05CL8 570 aaKnown RBP8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Zbtb44Q8R0A2 453 aa8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Atp2a1Q8R429 994 aa8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Pcdh18Q8VHR0 1134 aa8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Nmd3Q99L48 503 aaKnown RBP8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Toe1Q9D2E2 511 aa8.76□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Chd5A2A8L1 1946 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 4921501E09RikA0A0R4J054 908 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 CenpaO35216 134 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Slc27a3O88561 667 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Fen1P39749 378 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Pdcd2P46718 343 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Igsf9Q05BQ1 1179 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Calb2Q08331 271 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Fam160a1Q505K2 1081 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Ccdc125Q5U465 500 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Smg5Q6ZPY2 1017 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Tbc1d10cQ8C9V1 444 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Fate1Q8CEK7 99 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 4921504E06RikQ8CET2 560 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Zbtb8bQ8CII0 484 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Trim68Q8K243 485 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Lrrc8cQ8R502 803 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Lars2Q8VDC0 902 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Trim33Q99PP7 1142 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Batf3Q9D275 118 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 NfixP70257 488 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Mphosph8Q3TYA6 858 aaKnown RBP8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Syce2Q505B8 171 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 PhkbQ7TSH2 1085 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Srp68Q8BMA6 625 aaKnown RBP8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 RbakQ8BQC8 711 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Zfp120Q8BZW4 436 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Calhm6Q8C9E8 313 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Vps36Q91XD6 386 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Atp6v0a1Q9Z1G4 839 aaKnown RBP8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Mzf1S4R1L6 814 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Togaram1Q6A070 1776 aaKnown RBP8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Gm9774A0A0A6YVU8 407 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Nhsl2B1AXH1 854 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 BC035947B2RQY6 695 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Zc3h7bF8VPP8 982 aaKnown RBP8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Ppp1r9aH3BJD6 1292 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Rtn2O70622 471 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Rc3h2P0C090 1187 aaKnown RBP8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Meis2P97367 477 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Garnl3Q3V0G7 1038 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 WhammQ571B6 793 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Six1Q62231 284 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 BegainQ68EF6 600 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Znf879Q8BI99 563 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Rsad2Q8CBB9 362 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Cplx3Q8R1B5 158 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 HmcesQ8R1M0 353 aaKnown RBP8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 ChiaQ91XA9 473 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Hars2Q99KK9 505 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 PpidQ9CR16 370 aaKnown RBP8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Rab11fip1Q9D620 645 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Tmem174Q9DCX7 243 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 JmyQ9QXM1 983 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Mta2Q9R190 668 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Mpp2Q9WV34 552 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Twf2Q9Z0P5 349 aaKnown RBP8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Mrpl40Q9Z2Q5 206 aa8.75□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Zfp831A2ADM8 1628 aa8.74□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Cdk14O35495 469 aa8.74□□□□□ -1.01
Cdc40-201ENSMUST00000044166 CopeO89079 308 aa8.74□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Rph3aP47708 681 aa8.74□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Fermt1P59113 677 aa8.74□□□□□ -1.01
Cdc40-201ENSMUST00000044166 ZufspQ3T9Z9 577 aa8.74□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Palb2Q3U0P1 1104 aa8.74□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Fam8a1Q3URQ4 399 aa8.74□□□□□ -1.01
Cdc40-201ENSMUST00000044166 XiapQ60989 496 aa8.74□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Ugt1a9Q62452 528 aa8.74□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Atp2a3Q64518 1038 aa8.74□□□□□ -1.01
Cdc40-201ENSMUST00000044166 WaplQ65Z40 1200 aaKnown RBP8.74□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Ntrk3Q6VNS1 825 aa8.74□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Kcnt1Q6ZPR4 1224 aa8.74□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Rimbp2Q80U40 1072 aa8.74□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Tyw3Q8BSA9 257 aa8.74□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Btbd7Q8CFE5 1130 aa8.74□□□□□ -1.01
Cdc40-201ENSMUST00000044166 Havcr2Q8VIM0 281 aa8.74□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms