RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Aff1O88573 1216 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Anxa5P48036 319 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Bpifb6Q8BU51 449 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Trpd52l3Q9CQ14 231 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Spata1Q9D5R4 444 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Ccdc81Q9D5W4 654 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Ppp1r3fQ9JIG4 799 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Pcsk1nQ9QXV0 258 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Vmn2r121A2BE32 847 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Tcf12Q61286 706 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Atp4aQ64436 1033 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Znf280dQ68FE8 974 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Pdk1Q8BFP9 434 aaKnown RBP17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Pidd1Q9ERV7 915 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Olfr1123A2AT85 323 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Col6a1Q04857 1025 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Pid1Q3UBG2 217 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Trim33Q99PP7 1142 aa17.37■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gm43518A0A0G2JGB6 165 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Herc3A6H6S0 1050 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Cdh15P33146 784 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 DpydQ8CHR6 1025 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Q8VDP2 222 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Xpo7Q9EPK7 1087 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gm9992B2RWK3 458 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gm3424L7N298 263 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gm8246M0QWX9 263 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Cyp3a13Q64464 503 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Q6GQU0 248 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Unc93aQ710D3 458 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Trim65Q8BFW4 522 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Krt2Q3TTY5 707 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Ankrd23Q812A3 306 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gtf3c4Q8BMQ2 817 aaKnown RBP17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Irak4Q8R4K2 459 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Acot3Q9QYR7 432 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 HdcP23738 662 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Armcx5Q3UZB0 606 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Ulbp1Q8HWA3 334 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Abcf2Q99LE6 628 aaKnown RBP17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Stx7O70439 261 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 PdgfraP26618 1089 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Fam185aQ7TPD2 378 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Klra10Q9R1G6 266 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 M1apQ9Z0E1 529 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gm5483B2RV77 97 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Tlx1P43345 332 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Trim56Q80VI1 734 aaKnown RBP17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 GgcxQ9QYC7 757 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Slc39a2G3X943 309 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Tbc1d12Q6A039 696 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Usp31E9Q6Y8 1344 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Zbtb7aO88939 569 aaKnown RBP17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Znf827Q505G8 1078 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Fam120bQ6RI63 786 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Stx5Q8K1E0 355 aa17.36■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Q8BGD0 127 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Ccdc134Q8C7V8 229 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Inpp5fQ8CDA1 1132 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 NptxrQ99J85 493 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Aldh1b1Q9CZS1 519 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gm20911A0A087WSS0 222 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Mb21d2Q8C525 428 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Dnajc5gQ8C632 165 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Akr1c14Q91WT7 323 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gm3173A6NAS3 172 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gm3020E9Q3J7 150 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gm2897K7N6T7 172 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 XpaQ64267 272 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Nup93Q8BJ71 819 aaKnown RBP17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gm3411Q8C7R2 150 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 NcaldQ91X97 193 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Dmrtc1Q9D9R7 182 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Map3k20Q9ESL4 802 aaKnown RBP17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 1700016G14RikA0A286YCZ6 238 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Ctnnal1O88327 731 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Grid1Q61627 1009 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Stap2Q8R0L1 411 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Znf445Q8R2V3 986 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 McamQ8R2Y2 648 aaKnown RBP17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Serpinb3cA2RSF9 386 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Skint6A7XUZ6 1240 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Bpifb5Q3UQ05 490 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 PygbQ8CI94 843 aaKnown RBP17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Ago2Q8CJG0 860 aaKnown RBP17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 BfarQ8R079 450 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Trpm1Q2TV84 1622 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 SpoplQ2M2N2 392 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gm4952Q5FW57 296 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Far2Q7TNT2 515 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Ccdc137Q8R0K4 290 aaKnown RBP17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Kat2bQ9JHD1 813 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gm28897A0A087WP44 222 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Gm5160F8VPN3 147 aa17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 UmpsP13439 481 aaKnown RBP17.35■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Fastkd1Q6DI86 829 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Slc9c1Q6UJY2 1175 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Catsper3Q80W99 395 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 B3galnt2Q8BG28 504 aa17.34■□□□□ 0.37
Ccdc88a-201ENSMUST00000040182 Ppp6r2Q8R3Q2 923 aa17.34■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms