RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Armcx2Q6A058 784 aaKnown RBP8.99□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Ccdc68Q8BVC4 333 aa8.99□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 MrgbpQ9DAT2 204 aa8.99□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cyp2s1Q9DBX6 501 aa8.99□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Serpinb6eI7HJI3 429 aa8.99□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Folh1O35409 752 aa8.99□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 UgcgO88693 394 aa8.99□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 SftpdP50404 374 aa8.99□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Arl4cP61208 192 aa8.99□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Psmc1P62192 440 aa8.99□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Zc3h15Q3TIV5 426 aaKnown RBP8.99□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 R3hdm4Q4VBF2 262 aa8.99□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Adad1Q5SUE7 619 aa8.99□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Atl2Q6PA06 583 aa8.99□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Pja2Q80U04 707 aa8.99□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Pum3Q8BKS9 647 aaKnown RBP8.99□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Gga1Q8R0H9 635 aa8.99□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Setd3Q91WC0 594 aa8.99□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 SncbQ91ZZ3 133 aa8.99□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cry2Q9R194 592 aa8.99□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Slc22a3Q9WTW5 551 aa8.99□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 FAM186AQ9D9R9 1790 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Lta4hP24527 611 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Rfc1P35601 1131 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Siah1bQ06985 282 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Drc1Q3USS3 753 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Atg9bQ6EBV9 922 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cuedc2Q9CXX9 284 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Dhx15O35286 795 aaKnown RBP8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Prom2Q3UUY6 835 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Znf618Q80YY7 953 aaKnown RBP8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Ccdc134Q8C7V8 229 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Prpf31Q8CCF0 499 aaKnown RBP8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Pdik1lQ8QZR7 341 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Q91Z58 1206 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Nup50Q9JIH2 466 aaKnown RBP8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Tk2Q9R088 270 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cntnap2Q9CPW0 1332 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Oip5A2AQ14 241 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Abcb5B5X0E4 1255 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mmp10O55123 476 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Nfe2Q07279 373 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Il33Q8BVZ5 266 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Tmem145Q8C4U2 746 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Rab44Q8CB87 725 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Parp10Q8CIE4 960 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Rhobtb2Q91V93 728 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mrpl2Q9D773 306 aaKnown RBP8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Gtf2ird1Q9JI57 1104 aaKnown RBP8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Slc26a3Q9WVC8 757 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Zfp831A2ADM8 1628 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 GabreA2AMW3 916 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Rfx8D3YU81 596 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cops2P61202 443 aaKnown RBP8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Nsun2Q1HFZ0 757 aaKnown RBP8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Tfe3Q64092 572 aaKnown RBP8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Phka2Q8BWJ3 1235 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Efl1Q8C0D5 1127 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Znf687Q9D2D7 1237 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 PlekQ9JHK5 350 aaKnown RBP8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Lamb1P02469 1786 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 EloblA6PWE0 161 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Tnfrsf18O35714 228 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Pdk4O70571 412 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Soat2O88908 525 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 PkmP52480 531 aaKnown RBP8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Tmprss11eQ5S248 423 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 OcrlQ6NVF0 900 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Fam83aQ8K2P2 436 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 PlvapQ91VC4 438 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Them5Q9CQJ0 248 aa8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Edf1Q9JMG1 148 aaKnown RBP8.98□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mup10A2BIN1 180 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mup14A2CEK7 180 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Sh2d4bA6X942 431 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mup19A9C497 187 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mup15A9R9W0 180 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mup17B5X0G2 180 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Fam71aB7XG49 585 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mup8E9PVW0 235 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mup7E9QA79 235 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Gm3371F7CQW8 167 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cdk14O35495 469 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Il27raO70394 623 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mup6P02762 180 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mup1P11588 180 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mup2P11589 180 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cd44P15379 778 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Sox10Q04888 466 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Runx2Q08775 607 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Pid1Q3UBG2 217 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Rnf10Q3UIW5 804 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Fam81aQ3UXZ6 364 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Gm14685Q52KH6 695 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Abhd15Q5F2F2 459 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Orc2Q60862 576 aaKnown RBP8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cd37Q61470 281 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Sh3gl2Q62420 352 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 TwistnbQ78WZ7 330 aaKnown RBP8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cplx3Q8R1B5 158 aa8.97□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms