RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Vcam1P29533 739 aa12.2□□□□□ -0.46
Sdc1-201ENSMUST00000020911 AaasP58742 546 aa12.2□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Scarf2P59222 833 aa12.2□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Syne3Q4FZC9 975 aa12.2□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Clec4a4Q5YIR8 236 aa12.2□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Vav2Q60992 868 aa12.2□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Nell2Q61220 819 aa12.2□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Krt31Q61765 416 aa12.2□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Trim17Q7TPM3 477 aa12.2□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Krt75Q8BGZ7 551 aa12.2□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Ccdc15Q8C9M2 810 aa12.2□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Ppm1fQ8CGA0 452 aa12.2□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Pop1Q8K205 1045 aa12.2□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Pacs1Q8K212 961 aa12.2□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Cacnb1Q8R3Z5 597 aa12.2□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Clptm1Q8VBZ3 664 aa12.2□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Ndufa13Q9ERS2 144 aa12.2□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Prim2P33610 505 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Sar1aP36536 198 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Fitm2P59266 262 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Hddc2Q3SXD3 199 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Qrich1Q3UA37 777 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Spire2Q8K1S6 718 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 LzicQ8K3C3 190 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Col23a1Q8K4G2 532 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Plekhg6Q8R0J1 787 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Bud13Q8R149 637 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Rad51cQ924H5 366 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Fam32aQ9CR80 112 aaKnown RBP12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Luc7lQ9CYI4 371 aaKnown RBP12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Zbed3Q9D0L1 228 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Rsc1a1Q9ER99 582 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Nupr1Q9WTK0 80 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Trim10Q9WUH5 489 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Mtmr9Q9Z2D0 545 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Sec14l1A8Y5H7 715 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Tex28B1AYN9 409 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Gimap9G3X987 291 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Capn6O35646 641 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Nedd4P46935 887 aaKnown RBP12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 SbdsP70122 250 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Fbln1Q08879 705 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Patl1Q3TC46 770 aaKnown RBP12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Znf583Q3V080 568 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Ugt1a1Q63886 535 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Rasa4Q6PFQ7 802 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Tmc8Q7TN58 722 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Olfr301Q7TS04 311 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Enoph1Q8BGB7 257 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Vps52Q8C754 723 aaKnown RBP12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Ildr1Q8CBR1 537 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Klhl25Q8R2P1 589 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Olfr805Q8VFI4 319 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Dhx36Q8VHK9 1001 aaKnown RBP12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Pcdha10Q91Y20 946 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 1700020D05RikQ99PB1 294 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Q9CR55 154 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Hao2Q9NYQ2 353 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Cd97Q9Z0M6 818 aa12.19□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Ltbp2O08999 1813 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Ttc7bE9Q6P5 843 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Gm8257E9Q8R3 264 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Prdm15E9Q8T2 1174 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 TyrobpO54885 114 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Cyp2a4P15392 494 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Cyp2a5P20852 494 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 PpargP37238 505 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Lrrc36Q3V0M2 755 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Slc9a2Q3ZAS0 814 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 PRAG1Q571I4 1179 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Grik1Q60934 836 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Dzip3Q7TPV2 1204 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Fads6Q80UG1 342 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Plekhn1Q8C886 359 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Fbxl13Q8CDU4 790 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Fbxo21Q8VDH1 627 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Serbp1Q9CY58 407 aaKnown RBP12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Fam227aQ9D3V8 625 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Ifrd2Q9D8U0 441 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Tmco5aQ9D9D5 303 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 NvlQ9DBY8 855 aaKnown RBP12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Trim54Q9ERP3 366 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Prl2c5Q9JLV9 222 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Usp31E9Q6Y8 1344 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Gm10110D3Z5M2 615 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Chrna9G3X8Z7 479 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Clk4O35493 481 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Crhr1P35347 415 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Slc2a13Q3UHK1 637 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Tbc1d9bQ5SVR0 1263 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Akap4Q60662 849 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Fastkd1Q6DI86 829 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Jade3Q6IE82 823 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Kdm1aQ6ZQ88 853 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Rnf168Q80XJ2 565 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Plekha4Q8VC98 588 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Cd248Q91V98 765 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Dppa5aQ9CQS7 118 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Dnajc18Q9CZJ9 357 aa12.18□□□□□ -0.46
Sdc1-201ENSMUST00000020911 Prkab1Q9R078 270 aa12.18□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms