RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Mrps9Q9D7N3 390 aaKnown RBP10.94□□□□□ -0.66
Clip3-201ENSMUST00000014065 Pcsk1nQ9QXV0 258 aa10.94□□□□□ -0.66
Clip3-201ENSMUST00000014065 Cacna1sQ02789 1880 aa10.94□□□□□ -0.66
Clip3-201ENSMUST00000014065 Lamb1P02469 1786 aa10.94□□□□□ -0.66
Clip3-201ENSMUST00000014065 Alkbh1P0CB42 389 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Rag1P15919 1040 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 RxrbP28704 520 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Sox10Q04888 466 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Zdhhc18Q5Y5T2 380 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Cabs1Q8C633 391 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Dtnbp1Q91WZ8 352 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Hdac9Q99N13 588 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Rnf225Q9D7D1 332 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Adrm1Q9JKV1 407 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Extl3Q9WVL6 918 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Ccdc13D3YV10 709 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 AgxtO35423 414 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Nptx2O70340 429 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Gsta4P24472 222 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 CpQ61147 1061 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 C2cd5Q7TPS5 1016 aaKnown RBP10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Znf879Q8BI99 563 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Dus1lQ8C2P3 475 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Dclre1bQ8C7W7 541 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Smtnl2Q8CI12 456 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Scrn2Q8VCA8 425 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Gmcl1Q920G9 524 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Ptdss1Q99LH2 473 aaKnown RBP10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Ifi202Q9R002 445 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Atp6v1g2Q9WTT4 118 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Aldh18a1Q9Z110 795 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Ror2Q9Z138 944 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Fer1l6E0CZ42 1862 aa10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 VirmaA2AIV2 1811 aaKnown RBP10.93□□□□□ -0.66
Clip3-201ENSMUST00000014065 Ildr2B5TVM2 661 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Ttc17E9PVB5 1198 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Ttc7bE9Q6P5 843 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 UgcgO88693 394 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 AfmO89020 608 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Ces1cP23953 554 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Tbc1d10aP58802 500 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 SbdsP70122 250 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Brd9Q3UQU0 596 aaKnown RBP10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Q3UTZ3 580 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Ifnl2Q4VK74 193 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Nell2Q61220 819 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Xpnpep1Q6P1B1 623 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Arhgef18Q6P9R4 1021 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Smg5Q6ZPY2 1017 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Gprasp2Q8BUY8 826 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Afg3l2Q8JZQ2 802 aaKnown RBP10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 NkapQ9D0F4 415 aaKnown RBP10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Gm11549A0A286YD83 63 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Ttll6A4Q9E8 822 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Lrriq4A6H6A4 596 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Sstr1P30873 391 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Akr1b8P45377 316 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Cdc25cP48967 447 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Myl2P51667 166 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Dynlt1P51807 113 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Gja5Q01231 358 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Tmem65Q4VAE3 234 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Lamc2Q61092 1191 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 CyldQ80TQ2 952 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Q80WR5 230 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Rbm12b1Q80YR9 836 aaKnown RBP10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Rhot1Q8BG51 631 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Sap130Q8BIH0 1057 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Usp37Q8C0R0 979 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Slc12a8Q8VI23 705 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Q9D2Q3 444 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 SmapQ9R0P4 181 aaKnown RBP10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Prmt2Q9R144 448 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 TicrrQ8BQ33 1889 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Unc13dB2RUP2 1085 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Pdzrn4E9PUZ9 1014 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Magea4F2Z493 315 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 PorP37040 678 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 AdssP46664 456 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Nsun2Q1HFZ0 757 aaKnown RBP10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Cyb5d1Q5NCY3 228 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Mks1Q5SW45 561 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Tcf4Q60722 670 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Senp6Q6P7W0 1132 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 SrlQ7TQ48 910 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Pnma1Q8C1C8 353 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Apol7cQ8C6E1 369 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Wdr60Q8C761 999 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Plekhh3Q8VCE9 796 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Mrps22Q9CXW2 359 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Prss23Q9D6X6 382 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Cst12Q9DAN8 128 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 DmgdhQ9DBT9 869 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Clec4aQ9QZ15 238 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Sucla2Q9Z2I9 463 aa10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Rbbp6P97868 1790 aaKnown RBP10.92□□□□□ -0.66
Clip3-201ENSMUST00000014065 Rpl7aP12970 266 aaKnown RBP10.91□□□□□ -0.66
Clip3-201ENSMUST00000014065 Cav1P49817 178 aa10.91□□□□□ -0.66
Clip3-201ENSMUST00000014065 Gbp8Q2V6D6 525 aa10.91□□□□□ -0.66
Clip3-201ENSMUST00000014065 Gstt2Q61133 244 aa10.91□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms