RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeastyeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPN1YPR133C MSW1P04803 379 aa3.49□□□□□ -1.85
SPN1YPR133C OPI3P05375 206 aa3.49□□□□□ -1.85
SPN1YPR133C RPS8AP0CX39 200 aaKnown RBP3.49□□□□□ -1.85
SPN1YPR133C RPS8BP0CX40 200 aaKnown RBP3.49□□□□□ -1.85
SPN1YPR133C MRP2P10663 115 aaPredicted RBP3.49□□□□□ -1.85
SPN1YPR133C PET18P25362 215 aa3.49□□□□□ -1.85
SPN1YPR133C RPC34P32910 317 aa3.49□□□□□ -1.85
SPN1YPR133C GDH2P33327 1092 aaKnown RBP3.49□□□□□ -1.85
SPN1YPR133C YUH1P35127 236 aa3.49□□□□□ -1.85
SPN1YPR133C ATP3P38077 311 aaKnown RBP3.49□□□□□ -1.85
SPN1YPR133C FIG1P38224 298 aa3.49□□□□□ -1.85
SPN1YPR133C BFR1P38934 470 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85 RIP-Chip
SPN1YPR133C YER184CP39961 794 aa3.49□□□□□ -1.85
SPN1YPR133C OST1P41543 476 aaKnown RBP3.49□□□□□ -1.85
SPN1YPR133C VPS71Q03433 280 aa3.49□□□□□ -1.85
SPN1YPR133C POS5Q06892 414 aa3.49□□□□□ -1.85
SPN1YPR133C IRC25Q07951 179 aa3.49□□□□□ -1.85
SPN1YPR133C SCEIP03882 235 aa3.48□□□□□ -1.85
SPN1YPR133C NFT1P0CE68 1218 aa3.48□□□□□ -1.85
SPN1YPR133C ATP10P18496 279 aa3.48□□□□□ -1.85
SPN1YPR133C SAG1P20840 650 aa3.48□□□□□ -1.85
SPN1YPR133C ACH1P32316 526 aa3.48□□□□□ -1.85
SPN1YPR133C ASF2P32448 525 aaPredicted RBP3.48□□□□□ -1.85
SPN1YPR133C IES6P32617 166 aa3.48□□□□□ -1.85
SPN1YPR133C RIB1P38066 345 aa3.48□□□□□ -1.85
SPN1YPR133C TCM62P38228 572 aaKnown RBP3.48□□□□□ -1.85
SPN1YPR133C RFC3P38629 340 aa3.48□□□□□ -1.85
SPN1YPR133C LYS20P48570 428 aaKnown RBP3.48□□□□□ -1.85
SPN1YPR133C NSA1P53136 463 aaPredicted RBP3.48□□□□□ -1.85
SPN1YPR133C YNL033WP53964 284 aa3.48□□□□□ -1.85
SPN1YPR133C YNL019CP53975 284 aa3.48□□□□□ -1.85
SPN1YPR133C YDC1Q02896 317 aa3.48□□□□□ -1.85
SPN1YPR133C ORM2Q06144 216 aa3.48□□□□□ -1.85
SPN1YPR133C SPC3Q12133 184 aa3.48□□□□□ -1.85
SPN1YPR133C MRPL23Q12487 163 aaPredicted RBP3.48□□□□□ -1.85
SPN1YPR133C MHF2Q3E829 80 aa3.48□□□□□ -1.85
SPN1YPR133C COX5BP00425 151 aa3.47□□□□□ -1.85
SPN1YPR133C AQY1P0CD91 305 aa3.47□□□□□ -1.85
SPN1YPR133C DPM1P14020 267 aaKnown RBP3.47□□□□□ -1.85
SPN1YPR133C PEX3P28795 441 aa3.47□□□□□ -1.85
SPN1YPR133C ATP7P30902 174 aa3.47□□□□□ -1.85
SPN1YPR133C YCR041WP37265 110 aa3.47□□□□□ -1.85
SPN1YPR133C YBR241CP38142 488 aa3.47□□□□□ -1.85
SPN1YPR133C PHO90P39535 881 aa3.47□□□□□ -1.85
SPN1YPR133C SLM1P40485 686 aa3.47□□□□□ -1.85
SPN1YPR133C STB1P42845 420 aa3.47□□□□□ -1.85
SPN1YPR133C LOH1P47055 219 aa3.47□□□□□ -1.85
SPN1YPR133C UFD1P53044 361 aa3.47□□□□□ -1.85
SPN1YPR133C WSC2P53832 503 aa3.47□□□□□ -1.85
SPN1YPR133C NUP49Q02199 472 aa3.47□□□□□ -1.85
SPN1YPR133C YMR102CQ03177 834 aa3.47□□□□□ -1.85
SPN1YPR133C ATG26Q06321 1198 aa3.47□□□□□ -1.85
SPN1YPR133C GPI11Q06636 219 aa3.47□□□□□ -1.85
SPN1YPR133C YDL009CQ12210 107 aa3.47□□□□□ -1.85
SPN1YPR133C RRI1Q12468 440 aa3.47□□□□□ -1.85
SPN1YPR133C YOX1P34161 385 aa3.46□□□□□ -1.86
SPN1YPR133C MCH2P36032 473 aa3.46□□□□□ -1.86
SPN1YPR133C YGL101WP53144 215 aa3.46□□□□□ -1.86
SPN1YPR133C YGR168CP53293 376 aa3.46□□□□□ -1.86
SPN1YPR133C ATP23P53722 227 aa3.46□□□□□ -1.86
SPN1YPR133C ASI3P53983 676 aa3.46□□□□□ -1.86
SPN1YPR133C UTP15Q04305 513 aaKnown RBP3.46□□□□□ -1.86
SPN1YPR133C YDR114CQ04597 100 aa3.46□□□□□ -1.86
SPN1YPR133C MRPL51Q06090 140 aaPredicted RBP3.46□□□□□ -1.86
SPN1YPR133C YDL114WQ07530 308 aa3.46□□□□□ -1.86
SPN1YPR133C SYC1Q08553 188 aaPredicted RBP3.46□□□□□ -1.86
SPN1YPR133C FCY22Q12119 530 aa3.46□□□□□ -1.86
SPN1YPR133C YOR029WQ12243 111 aa3.46□□□□□ -1.86
SPN1YPR133C TDH1P00360 332 aaKnown RBP3.45□□□□□ -1.86
SPN1YPR133C RAD52P06778 471 aaKnown RBP3.45□□□□□ -1.86
SPN1YPR133C STE18P18852 110 aa3.45□□□□□ -1.86
SPN1YPR133C MRPS28P21771 286 aa3.45□□□□□ -1.86
SPN1YPR133C CMK2P22517 447 aa3.45□□□□□ -1.86
SPN1YPR133C MIG1P27705 504 aa3.45□□□□□ -1.86
SPN1YPR133C DEG1P31115 442 aaKnown RBP3.45□□□□□ -1.86
SPN1YPR133C PRP21P32524 280 aaPredicted RBP3.45□□□□□ -1.86
SPN1YPR133C SOR1P35497 357 aaKnown RBP3.45□□□□□ -1.86
SPN1YPR133C YKR015CP36111 568 aa3.45□□□□□ -1.86
SPN1YPR133C AIM20P40451 204 aa3.45□□□□□ -1.86
SPN1YPR133C USE1P53146 245 aa3.45□□□□□ -1.86
SPN1YPR133C PNC1P53184 216 aaKnown RBP3.45□□□□□ -1.86
SPN1YPR133C RRN9P53437 365 aa3.45□□□□□ -1.86
SPN1YPR133C RNH201P53942 307 aa3.45□□□□□ -1.86
SPN1YPR133C DIG2Q03373 323 aaKnown RBP3.45□□□□□ -1.86
SPN1YPR133C AIM36Q03798 255 aa3.45□□□□□ -1.86
SPN1YPR133C YMR166CQ03829 368 aa3.45□□□□□ -1.86
SPN1YPR133C NNT1Q05874 261 aa3.45□□□□□ -1.86
SPN1YPR133C SOR2Q07786 357 aa3.45□□□□□ -1.86
SPN1YPR133C YKL068W-AQ3E826 78 aa3.45□□□□□ -1.86
SPN1YPR133C TDH3P00359 332 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
SPN1YPR133C ECM25P32525 599 aa3.44□□□□□ -1.86
SPN1YPR133C REC114P32841 428 aa3.44□□□□□ -1.86
SPN1YPR133C SRP102P36057 244 aaPredicted RBP3.44□□□□□ -1.86
SPN1YPR133C QDR3P38227 689 aa3.44□□□□□ -1.86
SPN1YPR133C RTC2P38279 296 aa3.44□□□□□ -1.86
SPN1YPR133C RMD6P39975 231 aa3.44□□□□□ -1.86
SPN1YPR133C SYG1P40528 902 aa3.44□□□□□ -1.86
SPN1YPR133C SAS2P40963 338 aa3.44□□□□□ -1.86
SPN1YPR133C YJR011CP47086 261 aaPredicted RBP3.44□□□□□ -1.86
SPN1YPR133C GPI1P53306 609 aa3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 63.7 ms