RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeastyeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHL1YPL008W ORT1Q12375 292 aa3.57□□□□□ -1.84
CHL1YPL008W COX1P00401 534 aa3.56□□□□□ -1.84
CHL1YPL008W RPL1AP0CX43 217 aaKnown RBP3.56□□□□□ -1.84
CHL1YPL008W RPL1BP0CX44 217 aaKnown RBP3.56□□□□□ -1.84
CHL1YPL008W RPL3P14126 387 aaKnown RBP3.56□□□□□ -1.84
CHL1YPL008W URA6P15700 204 aa3.56□□□□□ -1.84
CHL1YPL008W CPR3P25719 182 aa3.56□□□□□ -1.84
CHL1YPL008W CAM1P29547 415 aaKnown RBP3.56□□□□□ -1.84
CHL1YPL008W SUA5P32579 426 aa3.56□□□□□ -1.84
CHL1YPL008W EMP70P32802 667 aa3.56□□□□□ -1.84
CHL1YPL008W MRPL27P36526 146 aaPredicted RBP3.56□□□□□ -1.84
CHL1YPL008W ATP3P38077 311 aaKnown RBP3.56□□□□□ -1.84
CHL1YPL008W LAG1P38703 411 aa3.56□□□□□ -1.84
CHL1YPL008W BMT5P40493 336 aa3.56□□□□□ -1.84
CHL1YPL008W CGR1P53188 120 aa3.56□□□□□ -1.84
CHL1YPL008W YLR456WQ06199 204 aa3.56□□□□□ -1.84
CHL1YPL008W YLR031WQ07978 186 aa3.56□□□□□ -1.84
CHL1YPL008W MIM1Q08176 113 aa3.56□□□□□ -1.84
CHL1YPL008W ISA2Q12425 185 aa3.56□□□□□ -1.84
CHL1YPL008W YBR298C-AQ8TGK4 73 aa3.56□□□□□ -1.84
CHL1YPL008W OPI3P05375 206 aa3.56□□□□□ -1.84
CHL1YPL008W RPS13P05756 151 aaKnown RBP3.56□□□□□ -1.84
CHL1YPL008W SPS4P09937 338 aa3.56□□□□□ -1.84
CHL1YPL008W ARO3P14843 370 aaKnown RBP3.56□□□□□ -1.84
CHL1YPL008W CTA1P15202 515 aa3.56□□□□□ -1.84
CHL1YPL008W SCO1P23833 295 aa3.56□□□□□ -1.84
CHL1YPL008W IFM1P25038 676 aa3.56□□□□□ -1.84
CHL1YPL008W YCP4P25349 247 aaKnown RBP3.56□□□□□ -1.84
CHL1YPL008W MXR2P25566 168 aa3.56□□□□□ -1.84
CHL1YPL008W TRR1P29509 319 aaKnown RBP3.56□□□□□ -1.84
CHL1YPL008W POP7P38291 140 aa3.56□□□□□ -1.84
CHL1YPL008W NTC20P38302 140 aaPredicted RBP3.56□□□□□ -1.84
CHL1YPL008W SSH1P38353 490 aaKnown RBP3.56□□□□□ -1.84
CHL1YPL008W PAM16P42949 149 aa3.56□□□□□ -1.84
CHL1YPL008W ERJ5P43613 295 aaPredicted RBP3.56□□□□□ -1.84
CHL1YPL008W YAP6Q03935 383 aa3.56□□□□□ -1.84
CHL1YPL008W MCH4Q08268 501 aa3.56□□□□□ -1.84
CHL1YPL008W YLR122CQ12312 125 aa3.56□□□□□ -1.84
CHL1YPL008W CMC2Q3E7A4 109 aa3.56□□□□□ -1.84
CHL1YPL008W TFB5Q3E7C1 72 aaPredicted RBP3.56□□□□□ -1.84
CHL1YPL008W FUS3P16892 353 aaKnown RBP3.55□□□□□ -1.84
CHL1YPL008W RPB8P20436 146 aa3.55□□□□□ -1.84
CHL1YPL008W CKS1P20486 150 aaKnown RBP3.55□□□□□ -1.84
CHL1YPL008W RPI1P23250 407 aaKnown RBP3.55□□□□□ -1.84
CHL1YPL008W HXT2P23585 541 aa3.55□□□□□ -1.84
CHL1YPL008W MEK1P24719 497 aaPredicted RBP3.55□□□□□ -1.84
CHL1YPL008W ADH7P25377 361 aa3.55□□□□□ -1.84
CHL1YPL008W SEF1P34228 1148 aa3.55□□□□□ -1.84
CHL1YPL008W GEP4P38812 185 aa3.55□□□□□ -1.84
CHL1YPL008W CFD1P40558 293 aa3.55□□□□□ -1.84
CHL1YPL008W CTK2P46962 323 aa3.55□□□□□ -1.84
CHL1YPL008W MPA43P53583 542 aaPredicted RBP3.55□□□□□ -1.84
CHL1YPL008W AAH1P53909 347 aa3.55□□□□□ -1.84
CHL1YPL008W TIM44Q01852 431 aa3.55□□□□□ -1.84
CHL1YPL008W ECM18Q04623 453 aa3.55□□□□□ -1.84
CHL1YPL008W TOM1Q03280 3268 aa3.55□□□□□ -1.84
CHL1YPL008W PHO2P07269 559 aa3.55□□□□□ -1.84
CHL1YPL008W MET3P08536 511 aa3.55□□□□□ -1.84
CHL1YPL008W YHR214C-DP0CX93 97 aa3.55□□□□□ -1.84
CHL1YPL008W CPR2P23285 205 aa3.55□□□□□ -1.84
CHL1YPL008W YCR006CP25350 157 aa3.55□□□□□ -1.84
CHL1YPL008W FRM2P37261 193 aa3.55□□□□□ -1.84
CHL1YPL008W YMR262WP38430 313 aa3.55□□□□□ -1.84
CHL1YPL008W LEU5P38702 357 aa3.55□□□□□ -1.84
CHL1YPL008W YPS6P40583 537 aa3.55□□□□□ -1.84
CHL1YPL008W CUP9P41817 306 aa3.55□□□□□ -1.84
CHL1YPL008W SPG5P42933 373 aa3.55□□□□□ -1.84
CHL1YPL008W CIN2P46670 268 aa3.55□□□□□ -1.84
CHL1YPL008W JAC1P53193 184 aa3.55□□□□□ -1.84
CHL1YPL008W COX18P53239 316 aa3.55□□□□□ -1.84
CHL1YPL008W NOC4Q06512 552 aaPredicted RBP3.55□□□□□ -1.84
CHL1YPL008W RDL2Q08742 149 aaKnown RBP3.55□□□□□ -1.84
CHL1YPL008W PRP46Q12417 451 aaPredicted RBP3.55□□□□□ -1.84
CHL1YPL008W ODC2Q99297 307 aa3.55□□□□□ -1.84
CHL1YPL008W PET20Q99373 253 aa3.55□□□□□ -1.84
CHL1YPL008W TDH1P00360 332 aaKnown RBP3.54□□□□□ -1.84
CHL1YPL008W PET18P25362 215 aa3.54□□□□□ -1.84
CHL1YPL008W NRP1P32770 719 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
CHL1YPL008W TCM62P38228 572 aaKnown RBP3.54□□□□□ -1.84
CHL1YPL008W SHG1P38337 142 aa3.54□□□□□ -1.84
CHL1YPL008W BXI1P48558 297 aa3.54□□□□□ -1.84
CHL1YPL008W RSM23Q01163 450 aa3.54□□□□□ -1.84
CHL1YPL008W CGI121Q03705 181 aaKnown RBP3.54□□□□□ -1.84
CHL1YPL008W SEI1Q06058 285 aa3.54□□□□□ -1.84
CHL1YPL008W YJR112W-AQ3E743 109 aa3.54□□□□□ -1.84
CHL1YPL008W YHR213W-AQ8TGT4 77 aa3.54□□□□□ -1.84
CHL1YPL008W YPT1P01123 206 aaKnown RBP3.54□□□□□ -1.84
CHL1YPL008W REP2P03872 296 aa3.54□□□□□ -1.84
CHL1YPL008W AFG1P32317 509 aa3.54□□□□□ -1.84
CHL1YPL008W OTU1P43558 301 aa3.54□□□□□ -1.84
CHL1YPL008W GNA1P43577 159 aaPredicted RBP3.54□□□□□ -1.84
CHL1YPL008W NIF3P53081 288 aa3.54□□□□□ -1.84
CHL1YPL008W PDR16P53860 351 aaKnown RBP3.54□□□□□ -1.84
CHL1YPL008W PET191Q02772 108 aa3.54□□□□□ -1.84
CHL1YPL008W ANT1Q06497 328 aa3.54□□□□□ -1.84
CHL1YPL008W SCP1Q08873 200 aa3.54□□□□□ -1.84
CHL1YPL008W MCT1Q12283 360 aa3.54□□□□□ -1.84
CHL1YPL008W YAL064W-BO13512 126 aa3.53□□□□□ -1.84
CHL1YPL008W SSA3P09435 649 aaKnown RBP3.53□□□□□ -1.84
CHL1YPL008W HSP150P32478 413 aa3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms