RNA–Protein interactions for RNA: YOL142W

RRP40, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP40, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP40YOL142W SMP3Q04174 516 aa3.84□□□□□ -1.79
RRP40YOL142W YMR226CQ05016 267 aaKnown RBP3.84□□□□□ -1.79
RRP40YOL142W BUR2Q05949 395 aa3.84□□□□□ -1.79
RRP40YOL142W YPR127WQ06494 345 aa3.84□□□□□ -1.79
RRP40YOL142W YHR214C-DP0CX93 97 aa3.83□□□□□ -1.8
RRP40YOL142W CTA1P15202 515 aa3.83□□□□□ -1.8
RRP40YOL142W RAD51P25454 400 aa3.83□□□□□ -1.8
RRP40YOL142W HSP30P25619 332 aa3.83□□□□□ -1.8
RRP40YOL142W EHD3P28817 500 aa3.83□□□□□ -1.8
RRP40YOL142W ARC19P33204 171 aaKnown RBP3.83□□□□□ -1.8
RRP40YOL142W MDL1P33310 695 aa3.83□□□□□ -1.8
RRP40YOL142W YBR285WP38354 144 aa3.83□□□□□ -1.8
RRP40YOL142W YHK8P38776 514 aa3.83□□□□□ -1.8
RRP40YOL142W TDA11P38854 504 aa3.83□□□□□ -1.8
RRP40YOL142W YHR180WP38868 163 aa3.83□□□□□ -1.8
RRP40YOL142W RRG9P40156 214 aa3.83□□□□□ -1.8
RRP40YOL142W SOK1P40317 901 aa3.83□□□□□ -1.8
RRP40YOL142W EGT2P42835 1041 aa3.83□□□□□ -1.8
RRP40YOL142W AIM24P47127 394 aa3.83□□□□□ -1.8
RRP40YOL142W BNS1P50084 137 aa3.83□□□□□ -1.8
RRP40YOL142W PDR16P53860 351 aaKnown RBP3.83□□□□□ -1.8
RRP40YOL142W COG5P53951 403 aa3.83□□□□□ -1.8
RRP40YOL142W ABZ2Q03266 374 aa3.83□□□□□ -1.8
RRP40YOL142W TDA1Q03533 586 aa3.83□□□□□ -1.8
RRP40YOL142W MIX14Q04341 121 aa3.83□□□□□ -1.8
RRP40YOL142W ELP6Q04868 273 aa3.83□□□□□ -1.8
RRP40YOL142W GRE1Q08969 168 aa3.83□□□□□ -1.8
RRP40YOL142W EAF3Q12432 401 aa3.83□□□□□ -1.8
RRP40YOL142W APC2Q12440 853 aa3.83□□□□□ -1.8
RRP40YOL142W TPK3P05986 398 aa3.82□□□□□ -1.8
RRP40YOL142W TFS1P14306 219 aa3.82□□□□□ -1.8
RRP40YOL142W FAR1P21268 830 aa3.82□□□□□ -1.8
RRP40YOL142W SPT10P35208 640 aa3.82□□□□□ -1.8
RRP40YOL142W JEN1P36035 616 aa3.82□□□□□ -1.8
RRP40YOL142W OXA1P39952 402 aa3.82□□□□□ -1.8
RRP40YOL142W HAC1P41546 238 aa3.82□□□□□ -1.8
RRP40YOL142W STB1P42845 420 aa3.82□□□□□ -1.8
RRP40YOL142W SHE4P51534 789 aa3.82□□□□□ -1.8
RRP40YOL142W YNR062CP53748 327 aa3.82□□□□□ -1.8
RRP40YOL142W YDR249CQ03787 373 aa3.82□□□□□ -1.8
RRP40YOL142W SNX41Q04053 625 aa3.82□□□□□ -1.8
RRP40YOL142W COQ10Q08058 207 aa3.82□□□□□ -1.8
RRP40YOL142W BTS1Q12051 335 aa3.82□□□□□ -1.8
RRP40YOL142W YDL109CQ12103 647 aa3.82□□□□□ -1.8
RRP40YOL142W SPC3Q12133 184 aa3.82□□□□□ -1.8
RRP40YOL142W SIA1Q12212 622 aa3.82□□□□□ -1.8
RRP40YOL142W YOR343CQ12484 108 aa3.82□□□□□ -1.8
RRP40YOL142W YFR010W-AP0C5N0 62 aa3.81□□□□□ -1.8
RRP40YOL142W MSN4P33749 630 aa3.81□□□□□ -1.8
RRP40YOL142W GPX1P36014 167 aa3.81□□□□□ -1.8
RRP40YOL142W YKL071WP36086 256 aa3.81□□□□□ -1.8
RRP40YOL142W GPI16P38875 610 aa3.81□□□□□ -1.8
RRP40YOL142W SOP4P39543 234 aaPredicted RBP3.81□□□□□ -1.8
RRP40YOL142W GDI1P39958 451 aaKnown RBP3.81□□□□□ -1.8
RRP40YOL142W VMA10P48836 114 aaKnown RBP3.81□□□□□ -1.8
RRP40YOL142W RPN14P53196 417 aa3.81□□□□□ -1.8
RRP40YOL142W CRH1P53301 507 aa3.81□□□□□ -1.8
RRP40YOL142W SDC1Q03323 175 aa3.81□□□□□ -1.8
RRP40YOL142W DML1Q03652 475 aa3.81□□□□□ -1.8
RRP40YOL142W COX20Q04935 205 aa3.81□□□□□ -1.8
RRP40YOL142W LIP2Q06005 328 aa3.81□□□□□ -1.8
RRP40YOL142W GAS2Q06135 555 aa3.81□□□□□ -1.8
RRP40YOL142W IRC19Q07843 230 aa3.81□□□□□ -1.8
RRP40YOL142W UIP4Q08926 304 aa3.81□□□□□ -1.8
RRP40YOL142W MHF1Q3E835 90 aa3.81□□□□□ -1.8
RRP40YOL142W SNF6P18888 332 aa3.8□□□□□ -1.8
RRP40YOL142W UTR1P21373 530 aa3.8□□□□□ -1.8
RRP40YOL142W MDH2P22133 377 aa3.8□□□□□ -1.8
RRP40YOL142W OAC1P32332 324 aa3.8□□□□□ -1.8
RRP40YOL142W YEF1P32622 495 aa3.8□□□□□ -1.8
RRP40YOL142W APE4P38821 490 aa3.8□□□□□ -1.8
RRP40YOL142W EGD2P38879 174 aaKnown RBP3.8□□□□□ -1.8
RRP40YOL142W RFC4P40339 323 aaKnown RBP3.8□□□□□ -1.8
RRP40YOL142W NAS2P40555 220 aa3.8□□□□□ -1.8
RRP40YOL142W ATG18P43601 500 aa3.8□□□□□ -1.8
RRP40YOL142W MNN5P46982 586 aa3.8□□□□□ -1.8
RRP40YOL142W YGL101WP53144 215 aa3.8□□□□□ -1.8
RRP40YOL142W YPL039WQ03080 316 aa3.8□□□□□ -1.8
RRP40YOL142W SCS7Q03529 384 aa3.8□□□□□ -1.8
RRP40YOL142W YMD8Q03697 442 aa3.8□□□□□ -1.8
RRP40YOL142W OST6Q03723 332 aa3.8□□□□□ -1.8
RRP40YOL142W RNH1Q04740 348 aa3.8□□□□□ -1.8
RRP40YOL142W RDL2Q08742 149 aaKnown RBP3.8□□□□□ -1.8
RRP40YOL142W YOR289WQ12012 251 aaPredicted RBP3.8□□□□□ -1.8
RRP40YOL142W PST2Q12335 198 aaKnown RBP3.8□□□□□ -1.8
RRP40YOL142W Q0144Q9ZZW2 109 aa3.8□□□□□ -1.8
RRP40YOL142W BPH1P25356 2167 aa3.8□□□□□ -1.8
RRP40YOL142W PIS1P06197 220 aaKnown RBP3.79□□□□□ -1.8
RRP40YOL142W CBP6P07253 162 aaPredicted RBP3.79□□□□□ -1.8
RRP40YOL142W ERG9P29704 444 aa3.79□□□□□ -1.8
RRP40YOL142W ANR2P36090 516 aaPredicted RBP3.79□□□□□ -1.8
RRP40YOL142W YMR262WP38430 313 aa3.79□□□□□ -1.8
RRP40YOL142W ARN2P38724 620 aa3.79□□□□□ -1.8
RRP40YOL142W CHL4P38907 458 aa3.79□□□□□ -1.8
RRP40YOL142W GVP36P40531 326 aaKnown RBP3.79□□□□□ -1.8
RRP40YOL142W GRX5Q02784 150 aa3.79□□□□□ -1.8
RRP40YOL142W TLG1Q03322 224 aa3.79□□□□□ -1.8
RRP40YOL142W YPR147CQ06522 304 aaKnown RBP3.79□□□□□ -1.8
RRP40YOL142W HRT1Q08273 121 aa3.79□□□□□ -1.8
RRP40YOL142W YAL064W-BO13512 126 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 61.4 ms