RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C YRA1Q12159 226 aaKnown RBP7.63□□□□□ -1.19
RPD3YNL330C HMS1Q12398 434 aa7.63□□□□□ -1.19
RPD3YNL330C TY1A-LR4P0C2I8 440 aaKnown RBP7.62□□□□□ -1.19
RPD3YNL330C YML003WP0CF16 290 aa7.62□□□□□ -1.19
RPD3YNL330C TY1A-DR6P0CX70 440 aa7.62□□□□□ -1.19
RPD3YNL330C TY1A-ER1P0CX71 440 aa7.62□□□□□ -1.19
RPD3YNL330C TY1A-LR2P0CX72 440 aa7.62□□□□□ -1.19
RPD3YNL330C TY1A-PLP0CX73 440 aa7.62□□□□□ -1.19
RPD3YNL330C TY1A-JR1P0CX74 440 aa7.62□□□□□ -1.19
RPD3YNL330C TY1A-LR3P0CX75 440 aa7.62□□□□□ -1.19
RPD3YNL330C TY1A-ML2P0CX76 440 aa7.62□□□□□ -1.19
RPD3YNL330C APA2P22108 325 aa7.62□□□□□ -1.19
RPD3YNL330C RFA1P22336 621 aaKnown RBP7.62□□□□□ -1.19
RPD3YNL330C SCO1P23833 295 aa7.62□□□□□ -1.19
RPD3YNL330C SEF1P34228 1148 aa7.62□□□□□ -1.19
RPD3YNL330C GTT1P40582 234 aa7.62□□□□□ -1.19
RPD3YNL330C SNO3P43544 222 aa7.62□□□□□ -1.19
RPD3YNL330C GPI15P53961 229 aa7.62□□□□□ -1.19
RPD3YNL330C YMR265CQ03508 461 aaKnown RBP7.62□□□□□ -1.19
RPD3YNL330C ERP1Q05359 219 aaKnown RBP7.62□□□□□ -1.19
RPD3YNL330C CTS2Q06350 511 aa7.62□□□□□ -1.19
RPD3YNL330C TY1A-GR1Q12085 440 aa7.62□□□□□ -1.19
RPD3YNL330C YCT1Q12235 531 aa7.62□□□□□ -1.19
RPD3YNL330C PRS5Q12265 496 aaKnown RBP7.62□□□□□ -1.19
RPD3YNL330C TY1A-PR3Q6Q5H1 440 aaKnown RBP7.62□□□□□ -1.19
RPD3YNL330C TY1A-OLQ92392 440 aaKnown RBP7.62□□□□□ -1.19
RPD3YNL330C UBA3Q99344 299 aa7.62□□□□□ -1.19
RPD3YNL330C SPO7P18410 259 aa7.61□□□□□ -1.19
RPD3YNL330C OLE1P21147 510 aaKnown RBP7.61□□□□□ -1.19
RPD3YNL330C AFG1P32317 509 aa7.61□□□□□ -1.19
RPD3YNL330C MKK2P32491 506 aa7.61□□□□□ -1.19
RPD3YNL330C YKR073CP36153 106 aa7.61□□□□□ -1.19
RPD3YNL330C GNA1P43577 159 aaPredicted RBP7.61□□□□□ -1.19
RPD3YNL330C SSN8P47821 323 aa7.61□□□□□ -1.19
RPD3YNL330C YGR126WP53274 230 aa7.61□□□□□ -1.19
RPD3YNL330C NRG1Q03125 231 aa7.61□□□□□ -1.19
RPD3YNL330C LRS4Q04087 347 aaKnown RBP7.61□□□□□ -1.19
RPD3YNL330C YMR084WA2P2R3 262 aa7.6□□□□□ -1.19
RPD3YNL330C YAL064W-BO13512 126 aa7.6□□□□□ -1.19
RPD3YNL330C MIR1P23641 311 aaKnown RBP7.6□□□□□ -1.19
RPD3YNL330C SHM2P37291 469 aaKnown RBP7.6□□□□□ -1.19
RPD3YNL330C SPC25P40014 221 aa7.6□□□□□ -1.19
RPD3YNL330C LTP1P40347 161 aa7.6□□□□□ -1.19
RPD3YNL330C CFD1P40558 293 aa7.6□□□□□ -1.19
RPD3YNL330C GPP1P41277 250 aaKnown RBP7.6□□□□□ -1.19
RPD3YNL330C YJR011CP47086 261 aaPredicted RBP7.6□□□□□ -1.19
RPD3YNL330C SOL1P50278 321 aa7.6□□□□□ -1.19
RPD3YNL330C SRP1Q02821 542 aaKnown RBP7.6□□□□□ -1.19
RPD3YNL330C SNO1Q03144 224 aa7.6□□□□□ -1.19
RPD3YNL330C THI74Q04083 370 aa7.6□□□□□ -1.19
RPD3YNL330C FIT1Q04433 528 aa7.6□□□□□ -1.19
RPD3YNL330C RDL2Q08742 149 aaKnown RBP7.6□□□□□ -1.19
RPD3YNL330C NIP7Q08962 181 aaKnown RBP7.6□□□□□ -1.19
RPD3YNL330C WHI5Q12416 295 aa7.6□□□□□ -1.19
RPD3YNL330C GAL1P04385 528 aa7.59□□□□□ -1.19
RPD3YNL330C RPS0AP32905 252 aaKnown RBP7.59□□□□□ -1.19
RPD3YNL330C OM14P38325 134 aa7.59□□□□□ -1.19
RPD3YNL330C YEA6P39953 335 aa7.59□□□□□ -1.19
RPD3YNL330C YJR056CP47115 236 aa7.59□□□□□ -1.19
RPD3YNL330C CGR1P53188 120 aa7.59□□□□□ -1.19
RPD3YNL330C MRPS17Q03246 237 aaPredicted RBP7.59□□□□□ -1.19
RPD3YNL330C DIG2Q03373 323 aaKnown RBP7.59□□□□□ -1.19
RPD3YNL330C MED4Q12343 284 aa7.59□□□□□ -1.19
RPD3YNL330C ISA2Q12425 185 aa7.59□□□□□ -1.19
RPD3YNL330C YDR034W-BQ6Q5X2 51 aa7.59□□□□□ -1.19
RPD3YNL330C CYR1P08678 2026 aaKnown RBP7.59□□□□□ -1.2
RPD3YNL330C CDC36P06100 191 aaPredicted RBP7.58□□□□□ -1.2
RPD3YNL330C YCR006CP25350 157 aa7.58□□□□□ -1.2
RPD3YNL330C IRC24P40580 263 aa7.58□□□□□ -1.2
RPD3YNL330C NIT2P47016 307 aa7.58□□□□□ -1.2
RPD3YNL330C AVT4P50944 713 aa7.58□□□□□ -1.2
RPD3YNL330C BSC5P53755 489 aa7.58□□□□□ -1.2
RPD3YNL330C DMA2P53924 522 aa7.58□□□□□ -1.2
RPD3YNL330C VPS28Q02767 242 aa7.58□□□□□ -1.2
RPD3YNL330C YPL039WQ03080 316 aa7.58□□□□□ -1.2
RPD3YNL330C YMR279CQ03263 540 aa7.58□□□□□ -1.2
RPD3YNL330C MRX9Q07349 420 aaKnown RBP7.58□□□□□ -1.2
RPD3YNL330C MES1P00958 751 aaKnown RBP7.57□□□□□ -1.2
RPD3YNL330C SED4P25365 1065 aa7.57□□□□□ -1.2
RPD3YNL330C RIB5P38145 238 aa7.57□□□□□ -1.2
RPD3YNL330C ATG8P38182 117 aaRIP-Chip data7.57□□□□□ -1.2not detected
RPD3YNL330C FAT1P38225 669 aa7.57□□□□□ -1.2
RPD3YNL330C YBR197CP38306 217 aa7.57□□□□□ -1.2
RPD3YNL330C YEA4P40004 342 aa7.57□□□□□ -1.2
RPD3YNL330C YER010CP40011 234 aa7.57□□□□□ -1.2
RPD3YNL330C YPS6P40583 537 aa7.57□□□□□ -1.2
RPD3YNL330C PHB1P40961 287 aa7.57□□□□□ -1.2
RPD3YNL330C HXT14P42833 540 aa7.57□□□□□ -1.2
RPD3YNL330C NSE4P43124 402 aa7.57□□□□□ -1.2
RPD3YNL330C MOB2P43563 287 aa7.57□□□□□ -1.2
RPD3YNL330C LSM8P47093 109 aaKnown RBP7.57□□□□□ -1.2
RPD3YNL330C MRPL22P53881 309 aa7.57□□□□□ -1.2
RPD3YNL330C TMA23Q03525 211 aa7.57□□□□□ -1.2
RPD3YNL330C YDR102CQ03864 110 aa7.57□□□□□ -1.2
RPD3YNL330C FRE7Q12333 620 aa7.57□□□□□ -1.2
RPD3YNL330C SWM1Q12379 170 aa7.57□□□□□ -1.2
RPD3YNL330C YPR145C-AQ2V2P0 78 aa7.57□□□□□ -1.2
RPD3YNL330C COX19Q3E731 98 aa7.57□□□□□ -1.2
RPD3YNL330C YHR214C-EQ8TGK0 99 aa7.57□□□□□ -1.2
RPD3YNL330C MCM1P11746 286 aa7.56□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms