RNA–Protein interactions for RNA: YHR004C

NEM1, Transcript of Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme, yeastyeast

Gene NEM1, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NEM1YHR004C YOL024WQ08172 172 aa3.03□□□□□ -1.92
NEM1YHR004C RRP40Q08285 240 aaKnown RBP3.03□□□□□ -1.92
NEM1YHR004C YOR292CQ08743 309 aa3.03□□□□□ -1.92
NEM1YHR004C ATP16Q12165 160 aa3.03□□□□□ -1.92
NEM1YHR004C RDI1Q12434 202 aa3.03□□□□□ -1.92
NEM1YHR004C IGO2Q9P305 131 aa3.03□□□□□ -1.92
NEM1YHR004C CDC28P00546 298 aaKnown RBP3.02□□□□□ -1.93
NEM1YHR004C STE7P06784 515 aa3.02□□□□□ -1.93
NEM1YHR004C MET2P08465 486 aa3.02□□□□□ -1.93
NEM1YHR004C YOL163WP0CF20 169 aa3.02□□□□□ -1.93
NEM1YHR004C DBF2P22204 572 aa3.02□□□□□ -1.93
NEM1YHR004C SEC14P24280 304 aaKnown RBP3.02□□□□□ -1.93
NEM1YHR004C UPS2P35200 230 aa3.02□□□□□ -1.93
NEM1YHR004C EFM1P38732 585 aa3.02□□□□□ -1.93
NEM1YHR004C YHI9P38765 294 aa3.02□□□□□ -1.93
NEM1YHR004C ECM14P38836 430 aa3.02□□□□□ -1.93
NEM1YHR004C CHL4P38907 458 aa3.02□□□□□ -1.93
NEM1YHR004C SEN34P39707 275 aa3.02□□□□□ -1.93
NEM1YHR004C FMP32P43557 207 aa3.02□□□□□ -1.93
NEM1YHR004C MRH4P53166 561 aa3.02□□□□□ -1.93
NEM1YHR004C SDS23P53172 527 aa3.02□□□□□ -1.93
NEM1YHR004C GOT1Q03554 138 aa3.02□□□□□ -1.93
NEM1YHR004C YDR248CQ03786 193 aa3.02□□□□□ -1.93
NEM1YHR004C ARO80Q04052 950 aa3.02□□□□□ -1.93
NEM1YHR004C UTP15Q04305 513 aaKnown RBP3.02□□□□□ -1.93
NEM1YHR004C YML096WQ04489 525 aa3.02□□□□□ -1.93
NEM1YHR004C YMR315WQ04869 349 aaKnown RBP3.02□□□□□ -1.93
NEM1YHR004C SUE1Q06524 206 aa3.02□□□□□ -1.93
NEM1YHR004C SYC1Q08553 188 aaPredicted RBP3.02□□□□□ -1.93
NEM1YHR004C JID1Q12350 301 aa3.02□□□□□ -1.93
NEM1YHR004C PRM7Q12459 698 aa3.02□□□□□ -1.93
NEM1YHR004C IDP1P21954 428 aaKnown RBP3.01□□□□□ -1.93
NEM1YHR004C IMP1P28627 190 aa3.01□□□□□ -1.93
NEM1YHR004C MBA1P38300 278 aa3.01□□□□□ -1.93
NEM1YHR004C SSH1P38353 490 aaKnown RBP3.01□□□□□ -1.93
NEM1YHR004C TIM17P39515 158 aa3.01□□□□□ -1.93
NEM1YHR004C YFL064CP43540 174 aa3.01□□□□□ -1.93
NEM1YHR004C YGL034CP53186 121 aa3.01□□□□□ -1.93
NEM1YHR004C AAH1P53909 347 aa3.01□□□□□ -1.93
NEM1YHR004C SDC1Q03323 175 aa3.01□□□□□ -1.93
NEM1YHR004C YDR124WQ04608 324 aa3.01□□□□□ -1.93
NEM1YHR004C YLR177WQ06251 628 aa3.01□□□□□ -1.93
NEM1YHR004C YOR186WQ08560 144 aa3.01□□□□□ -1.93
NEM1YHR004C USB1Q12208 290 aaKnown RBP3.01□□□□□ -1.93
NEM1YHR004C PEX11Q12462 236 aa3.01□□□□□ -1.93
NEM1YHR004C RPL25P04456 142 aaKnown RBP3□□□□□ -1.93
NEM1YHR004C MRS1P07266 363 aa3□□□□□ -1.93
NEM1YHR004C PBI2P0CT04 75 aaKnown RBP3□□□□□ -1.93
NEM1YHR004C ASP3-2P0CX77 362 aa3□□□□□ -1.93
NEM1YHR004C ASP3-3P0CX78 362 aa3□□□□□ -1.93
NEM1YHR004C ASP3-4P0CX79 362 aa3□□□□□ -1.93
NEM1YHR004C ASP3-1P0CZ17 362 aa3□□□□□ -1.93
NEM1YHR004C BUB2P26448 306 aaPredicted RBP3□□□□□ -1.93
NEM1YHR004C MDH3P32419 343 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
NEM1YHR004C CAT2P32796 670 aaKnown RBP3□□□□□ -1.93
NEM1YHR004C TIP20P33891 701 aa3□□□□□ -1.93
NEM1YHR004C YHL049CP38722 271 aa3□□□□□ -1.93
NEM1YHR004C SPL2P38839 148 aa3□□□□□ -1.93
NEM1YHR004C CYC2P38909 366 aa3□□□□□ -1.93
NEM1YHR004C LSM4P40070 187 aaKnown RBP3□□□□□ -1.93
NEM1YHR004C PRM10P42946 383 aa3□□□□□ -1.93
NEM1YHR004C TPC1P53257 314 aa3□□□□□ -1.93
NEM1YHR004C COG5P53951 403 aa3□□□□□ -1.93
NEM1YHR004C DYN3Q04949 312 aa3□□□□□ -1.93
NEM1YHR004C YPL278CQ08990 100 aa3□□□□□ -1.93
NEM1YHR004C YOR283WQ12040 230 aaKnown RBP3□□□□□ -1.93
NEM1YHR004C NAG1Q8TGN9 163 aa3□□□□□ -1.93
NEM1YHR004C TAF2P23255 1407 aa3□□□□□ -1.93
NEM1YHR004C CYC3P06182 269 aa2.99□□□□□ -1.93
NEM1YHR004C RPS14AP06367 137 aaKnown RBP2.99□□□□□ -1.93
NEM1YHR004C RPS24AP0CX31 135 aaKnown RBP2.99□□□□□ -1.93
NEM1YHR004C RPS24BP0CX32 135 aaKnown RBP2.99□□□□□ -1.93
NEM1YHR004C BGL2P15703 313 aaKnown RBP2.99□□□□□ -1.93
NEM1YHR004C APS1P35181 156 aa2.99□□□□□ -1.93
NEM1YHR004C GPX1P36014 167 aa2.99□□□□□ -1.93
NEM1YHR004C FRM2P37261 193 aa2.99□□□□□ -1.93
NEM1YHR004C PHO89P38361 574 aa2.99□□□□□ -1.93
NEM1YHR004C ARN2P38724 620 aa2.99□□□□□ -1.93
NEM1YHR004C RPS14BP39516 138 aaKnown RBP2.99□□□□□ -1.93
NEM1YHR004C YER076CP40049 302 aa2.99□□□□□ -1.93
NEM1YHR004C AVT7P40501 490 aa2.99□□□□□ -1.93
NEM1YHR004C YJR054WP47114 497 aa2.99□□□□□ -1.93
NEM1YHR004C COQ5P49017 307 aa2.99□□□□□ -1.93
NEM1YHR004C SYF2P53277 215 aaPredicted RBP2.99□□□□□ -1.93
NEM1YHR004C TMA20P89886 181 aaPredicted RBP2.99□□□□□ -1.93
NEM1YHR004C AIM34Q03673 198 aa2.99□□□□□ -1.93
NEM1YHR004C PKR1Q03880 122 aaKnown RBP2.99□□□□□ -1.93
NEM1YHR004C YPL257WQ08974 193 aa2.99□□□□□ -1.93
NEM1YHR004C BBP1Q12365 385 aa2.99□□□□□ -1.93
NEM1YHR004C EFG1Q3E705 233 aaKnown RBP2.99□□□□□ -1.93
NEM1YHR004C SNF4P12904 322 aa2.98□□□□□ -1.93
NEM1YHR004C GRX2P17695 143 aaKnown RBP2.98□□□□□ -1.93
NEM1YHR004C ERD2P18414 219 aa2.98□□□□□ -1.93
NEM1YHR004C OAC1P32332 324 aa2.98□□□□□ -1.93
NEM1YHR004C CSE2P33308 149 aa2.98□□□□□ -1.93
NEM1YHR004C SRY1P36007 326 aa2.98□□□□□ -1.93
NEM1YHR004C MIG3P39943 394 aa2.98□□□□□ -1.93
NEM1YHR004C BIR1P47134 954 aa2.98□□□□□ -1.93
NEM1YHR004C AIM25P47140 327 aa2.98□□□□□ -1.93
NEM1YHR004C FLC3P53121 802 aa2.98□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms