RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C RTT105P40063 208 aa3.15□□□□□ -1.91
OTU1YFL044C PFS2P42841 465 aaKnown RBP3.15□□□□□ -1.91
OTU1YFL044C YHC3P47040 408 aa3.15□□□□□ -1.91
OTU1YFL044C USE1P53146 245 aa3.15□□□□□ -1.91
OTU1YFL044C YGR168CP53293 376 aa3.15□□□□□ -1.91
OTU1YFL044C DSL1P53847 754 aa3.15□□□□□ -1.91
OTU1YFL044C BNA7Q04066 261 aa3.15□□□□□ -1.91
OTU1YFL044C MGR3Q04472 501 aa3.15□□□□□ -1.91
OTU1YFL044C YMR317WQ04893 1140 aa3.15□□□□□ -1.91
OTU1YFL044C PIN3Q06449 215 aa3.15□□□□□ -1.91
OTU1YFL044C IPK1Q06667 281 aa3.15□□□□□ -1.91
OTU1YFL044C CSI2Q08054 341 aa3.15□□□□□ -1.91
OTU1YFL044C RRS1Q08746 203 aaKnown RBP3.15□□□□□ -1.91
OTU1YFL044C MSW1P04803 379 aa3.14□□□□□ -1.91
OTU1YFL044C NFT1P0CE68 1218 aa3.14□□□□□ -1.91
OTU1YFL044C RPL42AP0CX27 106 aaKnown RBP3.14□□□□□ -1.91
OTU1YFL044C RPL42BP0CX28 106 aaKnown RBP3.14□□□□□ -1.91
OTU1YFL044C SAG1P20840 650 aa3.14□□□□□ -1.91
OTU1YFL044C VPH2P32341 215 aa3.14□□□□□ -1.91
OTU1YFL044C APE2P32454 952 aaKnown RBP3.14□□□□□ -1.91
OTU1YFL044C GLC7P32598 312 aaKnown RBP3.14□□□□□ -1.91
OTU1YFL044C RIB7P33312 244 aa3.14□□□□□ -1.91
OTU1YFL044C PHD1P36093 366 aa3.14□□□□□ -1.91
OTU1YFL044C PRY2P36110 329 aa3.14□□□□□ -1.91
OTU1YFL044C SKG1P36169 355 aa3.14□□□□□ -1.91
OTU1YFL044C YBR241CP38142 488 aa3.14□□□□□ -1.91
OTU1YFL044C HEK2P38199 381 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
OTU1YFL044C GPI18P38211 433 aa3.14□□□□□ -1.91
OTU1YFL044C QDR3P38227 689 aa3.14□□□□□ -1.91
OTU1YFL044C STB1P42845 420 aa3.14□□□□□ -1.91
OTU1YFL044C RPA34P47006 233 aaPredicted RBP3.14□□□□□ -1.91
OTU1YFL044C GEP7P53171 287 aa3.14□□□□□ -1.91
OTU1YFL044C GPI1P53306 609 aa3.14□□□□□ -1.91
OTU1YFL044C ERV25P54837 211 aaKnown RBP3.14□□□□□ -1.91
OTU1YFL044C YPL077CQ02831 240 aa3.14□□□□□ -1.91
OTU1YFL044C PEX12Q04370 399 aa3.14□□□□□ -1.91
OTU1YFL044C MRPL51Q06090 140 aaPredicted RBP3.14□□□□□ -1.91
OTU1YFL044C GPI11Q06636 219 aa3.14□□□□□ -1.91
OTU1YFL044C YCL048W-AQ2V2Q2 79 aa3.14□□□□□ -1.91
OTU1YFL044C OPI3P05375 206 aa3.13□□□□□ -1.91
OTU1YFL044C ARC19P33204 171 aaKnown RBP3.13□□□□□ -1.91
OTU1YFL044C GDH2P33327 1092 aaKnown RBP3.13□□□□□ -1.91
OTU1YFL044C TRM5P38793 499 aa3.13□□□□□ -1.91
OTU1YFL044C RBG1P39729 369 aa3.13□□□□□ -1.91
OTU1YFL044C GET1P53192 235 aa3.13□□□□□ -1.91
OTU1YFL044C SCW4P53334 386 aaKnown RBP3.13□□□□□ -1.91
OTU1YFL044C YNR064CP53750 290 aa3.13□□□□□ -1.91
OTU1YFL044C YNL095CP53932 642 aa3.13□□□□□ -1.91
OTU1YFL044C SPR6Q01684 191 aa3.13□□□□□ -1.91
OTU1YFL044C YDC1Q02896 317 aa3.13□□□□□ -1.91
OTU1YFL044C YMR087WQ04299 284 aa3.13□□□□□ -1.91
OTU1YFL044C ADH6Q04894 360 aaKnown RBP3.13□□□□□ -1.91
OTU1YFL044C PRP11Q07350 266 aaPredicted RBP3.13□□□□□ -1.91
OTU1YFL044C SPC3Q12133 184 aa3.13□□□□□ -1.91
OTU1YFL044C TIM9O74700 87 aa3.12□□□□□ -1.91
OTU1YFL044C DSF1P0CX08 502 aa3.12□□□□□ -1.91
OTU1YFL044C YNR073CP0CX09 502 aa3.12□□□□□ -1.91
OTU1YFL044C YCP4P25349 247 aaKnown RBP3.12□□□□□ -1.91
OTU1YFL044C ECM25P32525 599 aa3.12□□□□□ -1.91
OTU1YFL044C YPK3P38070 525 aa3.12□□□□□ -1.91
OTU1YFL044C YBR063CP38083 404 aa3.12□□□□□ -1.91
OTU1YFL044C PCL6P40038 420 aa3.12□□□□□ -1.91
OTU1YFL044C FLX1P40464 311 aa3.12□□□□□ -1.91
OTU1YFL044C RTS2P40962 232 aa3.12□□□□□ -1.91
OTU1YFL044C LOH1P47055 219 aa3.12□□□□□ -1.91
OTU1YFL044C PHB2P50085 310 aa3.12□□□□□ -1.91
OTU1YFL044C SAM50P53969 484 aa3.12□□□□□ -1.91
OTU1YFL044C AIM36Q03798 255 aa3.12□□□□□ -1.91
OTU1YFL044C YDL114WQ07530 308 aa3.12□□□□□ -1.91
OTU1YFL044C SYC1Q08553 188 aaPredicted RBP3.12□□□□□ -1.91
OTU1YFL044C VPS63O13549 108 aa3.11□□□□□ -1.91
OTU1YFL044C YCR007CP25354 239 aa3.11□□□□□ -1.91
OTU1YFL044C TCA17P32613 152 aa3.11□□□□□ -1.91
OTU1YFL044C IES6P32617 166 aa3.11□□□□□ -1.91
OTU1YFL044C YOX1P34161 385 aa3.11□□□□□ -1.91
OTU1YFL044C YNK1P36010 153 aaKnown RBP3.11□□□□□ -1.91
OTU1YFL044C SRP102P36057 244 aaPredicted RBP3.11□□□□□ -1.91
OTU1YFL044C YHR035WP38769 630 aa3.11□□□□□ -1.91
OTU1YFL044C OST1P41543 476 aaKnown RBP3.11□□□□□ -1.91
OTU1YFL044C HHT1P61830 136 aa3.11□□□□□ -1.91
OTU1YFL044C DIG2Q03373 323 aaKnown RBP3.11□□□□□ -1.91
OTU1YFL044C MSS11Q03825 758 aa3.11□□□□□ -1.91
OTU1YFL044C YDR415CQ04033 374 aaPredicted RBP3.11□□□□□ -1.91
OTU1YFL044C NNT1Q05874 261 aa3.11□□□□□ -1.91
OTU1YFL044C BCP1Q06338 283 aa3.11□□□□□ -1.91
OTU1YFL044C GEP3Q08622 556 aa3.11□□□□□ -1.91
OTU1YFL044C UIP4Q08926 304 aa3.11□□□□□ -1.91
OTU1YFL044C YOR289WQ12012 251 aaPredicted RBP3.11□□□□□ -1.91
OTU1YFL044C RAX2Q12465 1220 aa3.11□□□□□ -1.91
OTU1YFL044C TDH3P00359 332 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
OTU1YFL044C RPL39P04650 51 aa3.1□□□□□ -1.91
OTU1YFL044C YFL068WP0CX99 160 aa3.1□□□□□ -1.91
OTU1YFL044C YLL066W-AP0CY00 160 aa3.1□□□□□ -1.91
OTU1YFL044C YLL067W-AP0CY01 160 aa3.1□□□□□ -1.91
OTU1YFL044C NAM2P11325 894 aa3.1□□□□□ -1.91
OTU1YFL044C YAK1P14680 807 aa3.1□□□□□ -1.91
OTU1YFL044C SNF6P18888 332 aa3.1□□□□□ -1.91
OTU1YFL044C NTG1P31378 399 aa3.1□□□□□ -1.91
OTU1YFL044C ACH1P32316 526 aa3.1□□□□□ -1.91
OTU1YFL044C TFC1P32367 649 aa3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms