RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C LDS1P31379 325 aa5.46□□□□□ -1.54
SHO1YER118C TCA17P32613 152 aa5.46□□□□□ -1.54
SHO1YER118C PRY2P36110 329 aa5.46□□□□□ -1.54
SHO1YER118C MOH1P38191 138 aa5.46□□□□□ -1.54
SHO1YER118C IRC24P40580 263 aa5.46□□□□□ -1.54
SHO1YER118C YGR201CP42936 225 aa5.46□□□□□ -1.54
SHO1YER118C AIM25P47140 327 aa5.46□□□□□ -1.54
SHO1YER118C SDS23P53172 527 aa5.46□□□□□ -1.54
SHO1YER118C FMP41P53889 259 aaKnown RBP5.46□□□□□ -1.54
SHO1YER118C RPL15BP54780 204 aaPredicted RBP5.46□□□□□ -1.54
SHO1YER118C FDH1Q08911 376 aa5.46□□□□□ -1.54
SHO1YER118C MDM32Q12171 622 aa5.46□□□□□ -1.54
SHO1YER118C AYT1Q12226 474 aa5.46□□□□□ -1.54
SHO1YER118C RAD50P12753 1312 aa5.46□□□□□ -1.54
SHO1YER118C PHO2P07269 559 aa5.45□□□□□ -1.54
SHO1YER118C YER190C-BP0CX94 160 aa5.45□□□□□ -1.54
SHO1YER118C YEL077W-AP0CX95 160 aa5.45□□□□□ -1.54
SHO1YER118C YGR296C-BP0CX96 160 aa5.45□□□□□ -1.54
SHO1YER118C YPL283W-BP0CX97 160 aa5.45□□□□□ -1.54
SHO1YER118C YPR204C-AP0CX98 160 aa5.45□□□□□ -1.54
SHO1YER118C AIM17P23180 465 aaKnown RBP5.45□□□□□ -1.54
SHO1YER118C OAR1P35731 278 aa5.45□□□□□ -1.54
SHO1YER118C FRM2P37261 193 aa5.45□□□□□ -1.54
SHO1YER118C ARN2P38724 620 aa5.45□□□□□ -1.54
SHO1YER118C YJL213WP40896 331 aa5.45□□□□□ -1.54
SHO1YER118C UFE1P41834 346 aa5.45□□□□□ -1.54
SHO1YER118C EGT2P42835 1041 aa5.45□□□□□ -1.54
SHO1YER118C NCA3P46955 337 aa5.45□□□□□ -1.54
SHO1YER118C CLD1P53264 445 aa5.45□□□□□ -1.54
SHO1YER118C HSK3P69852 69 aa5.45□□□□□ -1.54
SHO1YER118C ADD37Q03233 198 aa5.45□□□□□ -1.54
SHO1YER118C YPD1Q07688 167 aa5.45□□□□□ -1.54
SHO1YER118C SYC1Q08553 188 aaPredicted RBP5.45□□□□□ -1.54
SHO1YER118C PSK1P31374 1356 aa5.44□□□□□ -1.54
SHO1YER118C MRS3P10566 314 aa5.44□□□□□ -1.54
SHO1YER118C NHP6AP11632 93 aaKnown RBP5.44□□□□□ -1.54
SHO1YER118C MSI1P13712 422 aa5.44□□□□□ -1.54
SHO1YER118C YCR025CP25352 136 aa5.44□□□□□ -1.54
SHO1YER118C PEX2P32800 271 aa5.44□□□□□ -1.54
SHO1YER118C SOL2P37262 315 aa5.44□□□□□ -1.54
SHO1YER118C SLM6P38343 150 aa5.44□□□□□ -1.54
SHO1YER118C SPL2P38839 148 aa5.44□□□□□ -1.54
SHO1YER118C YGR018CP53211 109 aa5.44□□□□□ -1.54
SHO1YER118C LSM7P53905 115 aaKnown RBP5.44□□□□□ -1.54
SHO1YER118C SWP1Q02795 286 aa5.44□□□□□ -1.54
SHO1YER118C YLR361C-AQ3E795 98 aa5.44□□□□□ -1.54
SHO1YER118C PTI1P39927 425 aaPredicted RBP5.43□□□□□ -1.54
SHO1YER118C FLC3P53121 802 aa5.43□□□□□ -1.54
SHO1YER118C GOT1Q03554 138 aa5.43□□□□□ -1.54
SHO1YER118C PKR1Q03880 122 aaKnown RBP5.43□□□□□ -1.54
SHO1YER118C ERP1Q05359 219 aaKnown RBP5.43□□□□□ -1.54
SHO1YER118C MSA1Q08471 629 aa5.43□□□□□ -1.54
SHO1YER118C YPL278CQ08990 100 aa5.43□□□□□ -1.54
SHO1YER118C TIR4Q12218 487 aaPredicted RBP5.43□□□□□ -1.54
SHO1YER118C EPT1P22140 391 aa5.42□□□□□ -1.54
SHO1YER118C YCR090CP25654 182 aaKnown RBP5.42□□□□□ -1.54
SHO1YER118C ATS1P31386 333 aa5.42□□□□□ -1.54
SHO1YER118C IPI1P38803 334 aaPredicted RBP5.42□□□□□ -1.54
SHO1YER118C RPR2P40571 144 aa5.42□□□□□ -1.54
SHO1YER118C YJR085CP47131 105 aaKnown RBP5.42□□□□□ -1.54
SHO1YER118C PRM8P53174 237 aa5.42□□□□□ -1.54
SHO1YER118C AAH1P53909 347 aa5.42□□□□□ -1.54
SHO1YER118C DYN2Q02647 92 aa5.42□□□□□ -1.54
SHO1YER118C YPL113CQ02961 396 aa5.42□□□□□ -1.54
SHO1YER118C YDR124WQ04608 324 aa5.42□□□□□ -1.54
SHO1YER118C TRM10Q12400 293 aa5.42□□□□□ -1.54
SHO1YER118C MHT1Q12525 324 aa5.42□□□□□ -1.54
SHO1YER118C ESP1Q03018 1630 aa5.41□□□□□ -1.54
SHO1YER118C CPR1P14832 162 aaKnown RBP5.41□□□□□ -1.54
SHO1YER118C SCO1P23833 295 aa5.41□□□□□ -1.54
SHO1YER118C SEC14P24280 304 aaKnown RBP5.41□□□□□ -1.54
SHO1YER118C YIL067CP40514 678 aa5.41□□□□□ -1.54
SHO1YER118C YGL034CP53186 121 aa5.41□□□□□ -1.54
SHO1YER118C HST4P53688 370 aa5.41□□□□□ -1.54
SHO1YER118C PLP1Q04004 230 aa5.41□□□□□ -1.54
SHO1YER118C YMR317WQ04893 1140 aa5.41□□□□□ -1.54
SHO1YER118C SWI1P09547 1314 aa5.41□□□□□ -1.54
SHO1YER118C ATG2P53855 1592 aa5.41□□□□□ -1.54
SHO1YER118C RPL15AP05748 204 aaKnown RBP5.4□□□□□ -1.54
SHO1YER118C YFL068WP0CX99 160 aa5.4□□□□□ -1.54
SHO1YER118C YLL066W-AP0CY00 160 aa5.4□□□□□ -1.54
SHO1YER118C YLL067W-AP0CY01 160 aa5.4□□□□□ -1.54
SHO1YER118C AHC2P25649 128 aa5.4□□□□□ -1.54
SHO1YER118C CDC50P25656 391 aa5.4□□□□□ -1.54
SHO1YER118C POP8P38208 133 aa5.4□□□□□ -1.54
SHO1YER118C GLE2P40066 365 aa5.4□□□□□ -1.54
SHO1YER118C PRM5P40476 318 aa5.4□□□□□ -1.54
SHO1YER118C SNX4P47057 423 aa5.4□□□□□ -1.54
SHO1YER118C IMP4P53941 290 aaKnown RBP5.4□□□□□ -1.54
SHO1YER118C CSN9Q03981 162 aa5.4□□□□□ -1.54
SHO1YER118C HPT1Q04178 221 aaKnown RBP5.4□□□□□ -1.54
SHO1YER118C HRI1Q05905 244 aaKnown RBP5.4□□□□□ -1.54
SHO1YER118C YLR177WQ06251 628 aa5.4□□□□□ -1.54
SHO1YER118C YOL160WQ08321 113 aa5.4□□□□□ -1.54
SHO1YER118C RRG7Q08774 242 aaPredicted RBP5.4□□□□□ -1.54
SHO1YER118C YPL257WQ08974 193 aa5.4□□□□□ -1.54
SHO1YER118C PEP1P32319 1579 aa5.39□□□□□ -1.55
SHO1YER118C YHR139C-AO13536 103 aa5.39□□□□□ -1.55
SHO1YER118C SNF4P12904 322 aa5.39□□□□□ -1.55
SHO1YER118C FCY2P17064 533 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 52.6 ms