RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C PAL1Q05518 499 aaKnown RBP1.89□□□□□ -2.11
PRP6YBR055C GPM2Q12008 311 aa1.89□□□□□ -2.11
PRP6YBR055C TRM10Q12400 293 aa1.89□□□□□ -2.11
PRP6YBR055C YAL063C-AQ3E791 96 aa1.89□□□□□ -2.11
PRP6YBR055C PDR5P33302 1511 aaKnown RBP1.89□□□□□ -2.11
PRP6YBR055C NUP192P47054 1683 aa1.88□□□□□ -2.11
PRP6YBR055C TUS1Q06412 1307 aa1.88□□□□□ -2.11
PRP6YBR055C BCY1P07278 416 aaKnown RBP1.88□□□□□ -2.11
PRP6YBR055C GPI18P38211 433 aa1.88□□□□□ -2.11
PRP6YBR055C PHO89P38361 574 aa1.88□□□□□ -2.11
PRP6YBR055C TRM5P38793 499 aa1.88□□□□□ -2.11
PRP6YBR055C YMR144WP40214 342 aaKnown RBP1.88□□□□□ -2.11
PRP6YBR055C YGL118CP53132 145 aa1.88□□□□□ -2.11
PRP6YBR055C SLX9P53251 210 aaPredicted RBP1.88□□□□□ -2.11
PRP6YBR055C IMP4P53941 290 aaKnown RBP1.88□□□□□ -2.11
PRP6YBR055C YLR152CP54072 576 aa1.88□□□□□ -2.11
PRP6YBR055C VHS1Q03785 461 aa1.88□□□□□ -2.11
PRP6YBR055C DXO1Q06349 442 aa1.88□□□□□ -2.11
PRP6YBR055C WTM1Q12363 437 aaKnown RBP1.88□□□□□ -2.11
PRP6YBR055C CMC2Q3E7A4 109 aa1.88□□□□□ -2.11
PRP6YBR055C FLO11P08640 1367 aa1.88□□□□□ -2.11
PRP6YBR055C COX4P04037 155 aa1.88□□□□□ -2.11
PRP6YBR055C SMP1P38128 452 aa1.88□□□□□ -2.11
PRP6YBR055C RRT13P40042 185 aa1.88□□□□□ -2.11
PRP6YBR055C RRG9P40156 214 aa1.88□□□□□ -2.11
PRP6YBR055C YIL001WP40560 513 aa1.88□□□□□ -2.11
PRP6YBR055C FYV6P53913 173 aa1.88□□□□□ -2.11
PRP6YBR055C GRE1Q08969 168 aa1.88□□□□□ -2.11
PRP6YBR055C YSP2Q06681 1438 aa1.88□□□□□ -2.11
PRP6YBR055C ATP7P30902 174 aa1.87□□□□□ -2.11
PRP6YBR055C YHB1P39676 399 aaKnown RBP1.87□□□□□ -2.11
PRP6YBR055C SEC72P39742 193 aaKnown RBP1.87□□□□□ -2.11
PRP6YBR055C YPI1P43587 155 aa1.87□□□□□ -2.11
PRP6YBR055C CPR7P47103 393 aa1.87□□□□□ -2.11
PRP6YBR055C YGR018CP53211 109 aa1.87□□□□□ -2.11
PRP6YBR055C SWT21P53873 357 aaPredicted RBP1.87□□□□□ -2.11
PRP6YBR055C DIA1P54005 336 aa1.87□□□□□ -2.11
PRP6YBR055C SEI1Q06058 285 aa1.87□□□□□ -2.11
PRP6YBR055C COX5AP00424 153 aa1.87□□□□□ -2.11
PRP6YBR055C URA6P15700 204 aa1.87□□□□□ -2.11
PRP6YBR055C SPS18P32572 300 aa1.87□□□□□ -2.11
PRP6YBR055C AST1P35183 429 aa1.87□□□□□ -2.11
PRP6YBR055C HMT1P38074 348 aa1.87□□□□□ -2.11
PRP6YBR055C EGD2P38879 174 aaKnown RBP1.87□□□□□ -2.11
PRP6YBR055C EDC2P40023 145 aaPredicted RBP1.87□□□□□ -2.11
PRP6YBR055C AVT6P40074 448 aa1.87□□□□□ -2.11
PRP6YBR055C BMT5P40493 336 aa1.87□□□□□ -2.11
PRP6YBR055C YAL067W-AQ8TGK6 75 aa1.87□□□□□ -2.11
PRP6YBR055C SNF2P22082 1703 aa1.86□□□□□ -2.11
PRP6YBR055C DBF2P22204 572 aa1.86□□□□□ -2.11
PRP6YBR055C ERG2P32352 222 aa1.86□□□□□ -2.11
PRP6YBR055C DRE2P36152 348 aa1.86□□□□□ -2.11
PRP6YBR055C RPE1P46969 238 aa1.86□□□□□ -2.11
PRP6YBR055C YGL262WP53054 175 aa1.86□□□□□ -2.11
PRP6YBR055C MRPS16Q02608 121 aa1.86□□□□□ -2.11
PRP6YBR055C GOT1Q03554 138 aa1.86□□□□□ -2.11
PRP6YBR055C YDL144CQ07589 356 aa1.86□□□□□ -2.11
PRP6YBR055C DFM1Q12743 341 aaKnown RBP1.86□□□□□ -2.11
PRP6YBR055C IKI3Q06706 1349 aaKnown RBP1.86□□□□□ -2.11
PRP6YBR055C SNA3P14359 133 aa1.86□□□□□ -2.11
PRP6YBR055C PHO80P20052 293 aa1.86□□□□□ -2.11
PRP6YBR055C ISY1P21374 235 aaPredicted RBP1.86□□□□□ -2.11
PRP6YBR055C DPB2P24482 689 aaPredicted RBP1.86□□□□□ -2.11
PRP6YBR055C VPH2P32341 215 aa1.86□□□□□ -2.11
PRP6YBR055C ARN2P38724 620 aa1.86□□□□□ -2.11
PRP6YBR055C YJR149WP47177 404 aa1.86□□□□□ -2.11
PRP6YBR055C PGU1P47180 361 aa1.86□□□□□ -2.11
PRP6YBR055C AAH1P53909 347 aa1.86□□□□□ -2.11
PRP6YBR055C GIM5Q04493 163 aa1.86□□□□□ -2.11
PRP6YBR055C FUS2Q05670 677 aa1.86□□□□□ -2.11
PRP6YBR055C TPO4Q12256 659 aa1.86□□□□□ -2.11
PRP6YBR055C PSK1P31374 1356 aa1.86□□□□□ -2.11
PRP6YBR055C URB1P34241 1764 aaKnown RBP1.86□□□□□ -2.11
PRP6YBR055C FKS3Q04952 1785 aa1.86□□□□□ -2.11
PRP6YBR055C SPT3P06844 337 aa1.85□□□□□ -2.11
PRP6YBR055C MRPL27P36526 146 aaPredicted RBP1.85□□□□□ -2.11
PRP6YBR055C YBL081WP38180 368 aaKnown RBP1.85□□□□□ -2.11
PRP6YBR055C ECM34P38728 170 aa1.85□□□□□ -2.11
PRP6YBR055C YIL054WP40524 105 aa1.85□□□□□ -2.11
PRP6YBR055C MCM22P47167 239 aa1.85□□□□□ -2.11
PRP6YBR055C BRR6P53062 197 aa1.85□□□□□ -2.11
PRP6YBR055C YDR124WQ04608 324 aa1.85□□□□□ -2.11
PRP6YBR055C MCH1Q07376 486 aa1.85□□□□□ -2.11
PRP6YBR055C TLG2Q08144 397 aa1.85□□□□□ -2.11
PRP6YBR055C YBL008W-AQ3E821 79 aa1.85□□□□□ -2.11
PRP6YBR055C SWI1P09547 1314 aa1.85□□□□□ -2.11
PRP6YBR055C PDR11P40550 1411 aa1.85□□□□□ -2.11
PRP6YBR055C CDC28P00546 298 aaKnown RBP1.85□□□□□ -2.11
PRP6YBR055C SNF6P18888 332 aa1.85□□□□□ -2.11
PRP6YBR055C GRE3P38715 327 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
PRP6YBR055C MIC19P43594 170 aa1.85□□□□□ -2.11
PRP6YBR055C TOS8P53147 276 aa1.85□□□□□ -2.11
PRP6YBR055C MRH4P53166 561 aa1.85□□□□□ -2.11
PRP6YBR055C YGL034CP53186 121 aa1.85□□□□□ -2.11
PRP6YBR055C CAX4P53223 239 aa1.85□□□□□ -2.11
PRP6YBR055C NNT1Q05874 261 aa1.85□□□□□ -2.11
PRP6YBR055C YLR179CQ06252 201 aaKnown RBP1.85□□□□□ -2.11
PRP6YBR055C YPL150WQ12152 901 aa1.85□□□□□ -2.11
PRP6YBR055C FBA1P14540 359 aaKnown RBP1.84□□□□□ -2.11
PRP6YBR055C YPT53P36019 220 aa1.84□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms