RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C ADK1P07170 222 aaKnown RBP2.01□□□□□ -2.09
CLN3YAL040C YLL053CP0CD98 152 aa2.01□□□□□ -2.09
CLN3YAL040C RPL18AP0CX49 186 aaKnown RBP2.01□□□□□ -2.09
CLN3YAL040C RPL18BP0CX50 186 aaKnown RBP2.01□□□□□ -2.09
CLN3YAL040C RPS18AP0CX55 146 aaKnown RBP2.01□□□□□ -2.09
CLN3YAL040C RPS18BP0CX56 146 aaPredicted RBP2.01□□□□□ -2.09
CLN3YAL040C PPA2P28239 310 aa2.01□□□□□ -2.09
CLN3YAL040C TAF14P35189 244 aa2.01□□□□□ -2.09
CLN3YAL040C COS9P36034 407 aa2.01□□□□□ -2.09
CLN3YAL040C YKL071WP36086 256 aa2.01□□□□□ -2.09
CLN3YAL040C DTR1P38125 572 aa2.01□□□□□ -2.09
CLN3YAL040C PAU24P38155 120 aa2.01□□□□□ -2.09
CLN3YAL040C YBR137WP38276 179 aa2.01□□□□□ -2.09
CLN3YAL040C IPI1P38803 334 aaPredicted RBP2.01□□□□□ -2.09
CLN3YAL040C YHR180WP38868 163 aa2.01□□□□□ -2.09
CLN3YAL040C FET3P38993 636 aa2.01□□□□□ -2.09
CLN3YAL040C YFL015CP43578 164 aa2.01□□□□□ -2.09
CLN3YAL040C PMT5P52867 743 aa2.01□□□□□ -2.09
CLN3YAL040C YGL235WP53071 178 aa2.01□□□□□ -2.09
CLN3YAL040C PFA5Q03289 374 aa2.01□□□□□ -2.09
CLN3YAL040C IZH1Q03419 316 aa2.01□□□□□ -2.09
CLN3YAL040C BUR2Q05949 395 aa2.01□□□□□ -2.09
CLN3YAL040C SNT309Q06091 175 aaPredicted RBP2.01□□□□□ -2.09
CLN3YAL040C YPR127WQ06494 345 aa2.01□□□□□ -2.09
CLN3YAL040C ASR1Q06834 288 aa2.01□□□□□ -2.09
CLN3YAL040C PAM18Q07914 168 aa2.01□□□□□ -2.09
CLN3YAL040C YOR289WQ12012 251 aaPredicted RBP2.01□□□□□ -2.09
CLN3YAL040C FRE7Q12333 620 aa2.01□□□□□ -2.09
CLN3YAL040C PCL9Q12477 304 aa2.01□□□□□ -2.09
CLN3YAL040C YLR099W-AQ3E798 87 aa2.01□□□□□ -2.09
CLN3YAL040C SUS1Q6WNK7 96 aa2.01□□□□□ -2.09
CLN3YAL040C UBA3Q99344 299 aa2.01□□□□□ -2.09
CLN3YAL040C FSH3Q99369 266 aa2.01□□□□□ -2.09
CLN3YAL040C RPL7AP05737 244 aaKnown RBP2□□□□□ -2.09
CLN3YAL040C ARF1P11076 181 aaKnown RBP2□□□□□ -2.09
CLN3YAL040C GRX2P17695 143 aaKnown RBP2□□□□□ -2.09
CLN3YAL040C STE18P18852 110 aa2□□□□□ -2.09
CLN3YAL040C PHO80P20052 293 aa2□□□□□ -2.09
CLN3YAL040C ZRC1P20107 442 aa2□□□□□ -2.09
CLN3YAL040C PCL1P24867 279 aa2□□□□□ -2.09
CLN3YAL040C YCP4P25349 247 aaKnown RBP2□□□□□ -2.09
CLN3YAL040C PUT3P25502 979 aaPredicted RBP2□□□□□ -2.09
CLN3YAL040C SNC1P31109 117 aa2□□□□□ -2.09
CLN3YAL040C DEG1P31115 442 aaKnown RBP2□□□□□ -2.09
CLN3YAL040C PMT2P31382 759 aa2□□□□□ -2.09
CLN3YAL040C RNP1P32385 249 aa2□□□□□ -2.09
CLN3YAL040C VAM7P32912 316 aa2□□□□□ -2.09
CLN3YAL040C PDR3P33200 976 aa2□□□□□ -2.09
CLN3YAL040C JEN1P36035 616 aa2□□□□□ -2.09
CLN3YAL040C RSM22P36056 628 aa2□□□□□ -2.09
CLN3YAL040C PRS4P38063 326 aaPredicted RBP2□□□□□ -2.09
CLN3YAL040C YBR063CP38083 404 aa2□□□□□ -2.09
CLN3YAL040C APD1P38281 316 aa2□□□□□ -2.09
CLN3YAL040C OM14P38325 134 aa2□□□□□ -2.09
CLN3YAL040C DDI1P40087 428 aa2□□□□□ -2.09
CLN3YAL040C YKE4P40544 346 aa2□□□□□ -2.09
CLN3YAL040C HXT9P40885 567 aa2□□□□□ -2.09
CLN3YAL040C GDS1P41913 522 aa2□□□□□ -2.09
CLN3YAL040C SER2P42941 309 aa2□□□□□ -2.09
CLN3YAL040C ATG18P43601 500 aa2□□□□□ -2.09
CLN3YAL040C MRX5P47007 382 aa2□□□□□ -2.09
CLN3YAL040C SFH5P47008 294 aa2□□□□□ -2.09
CLN3YAL040C APS3P47064 194 aa2□□□□□ -2.09
CLN3YAL040C YAE1P47118 141 aaPredicted RBP2□□□□□ -2.09
CLN3YAL040C DIE2P50076 525 aa2□□□□□ -2.09
CLN3YAL040C IMD3P50095 523 aaKnown RBP2□□□□□ -2.09
CLN3YAL040C UBP8P50102 471 aa2□□□□□ -2.09
CLN3YAL040C DUG3P53871 357 aa2□□□□□ -2.09
CLN3YAL040C GPI15P53961 229 aa2□□□□□ -2.09
CLN3YAL040C YLR460CP54007 376 aa2□□□□□ -2.09
CLN3YAL040C HXT11P54862 567 aa2□□□□□ -2.09
CLN3YAL040C RVB1Q03940 463 aaKnown RBP2□□□□□ -2.09
CLN3YAL040C SNX41Q04053 625 aa2□□□□□ -2.09
CLN3YAL040C PEX10Q05568 337 aa2□□□□□ -2.09
CLN3YAL040C YOR376WQ08900 122 aa2□□□□□ -2.09
CLN3YAL040C ATG41Q12048 136 aa2□□□□□ -2.09
CLN3YAL040C YDL109CQ12103 647 aa2□□□□□ -2.09
CLN3YAL040C YRA1Q12159 226 aaKnown RBP2□□□□□ -2.09
CLN3YAL040C RPL7BQ12213 244 aaKnown RBP2□□□□□ -2.09
CLN3YAL040C YOR214CQ12282 236 aa2□□□□□ -2.09
CLN3YAL040C HMS1Q12398 434 aa2□□□□□ -2.09
CLN3YAL040C YPR1Q12458 312 aa2□□□□□ -2.09
CLN3YAL040C TOR1P35169 2470 aa2□□□□□ -2.09
CLN3YAL040C ADH2P00331 348 aaKnown RBP2□□□□□ -2.09
CLN3YAL040C OPI3P05375 206 aa2□□□□□ -2.09
CLN3YAL040C PRE7P23724 241 aaKnown RBP2□□□□□ -2.09
CLN3YAL040C EXG1P23776 448 aaKnown RBP2□□□□□ -2.09
CLN3YAL040C YCR102CP25608 368 aa2□□□□□ -2.09
CLN3YAL040C FUN19P28003 413 aaPredicted RBP2□□□□□ -2.09
CLN3YAL040C FUN26P31381 517 aa2□□□□□ -2.09
CLN3YAL040C SPT14P32363 452 aa2□□□□□ -2.09
CLN3YAL040C ERG24P32462 438 aaKnown RBP2□□□□□ -2.09
CLN3YAL040C ACP1P32463 125 aa2□□□□□ -2.09
CLN3YAL040C YKL162CP36052 402 aa2□□□□□ -2.09
CLN3YAL040C CHK1P38147 527 aa2□□□□□ -2.09
CLN3YAL040C GRE3P38715 327 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
CLN3YAL040C HTD2P38790 280 aaKnown RBP2□□□□□ -2.09
CLN3YAL040C PHO90P39535 881 aa2□□□□□ -2.09
CLN3YAL040C FCY21P40039 528 aa2□□□□□ -2.09
CLN3YAL040C YER079WP40052 210 aaKnown RBP2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 65.3 ms