RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 MTMR12Q9C0I1 747 aa18.91■□□□□ 0.62
PHGDH-230ENST00000641927 TMEM117Q9H0C3 514 aa18.91■□□□□ 0.62
PHGDH-230ENST00000641927 TMEM8AQ9HCN3 771 aa18.91■□□□□ 0.62
PHGDH-230ENST00000641927 UBN1Q9NPG3 1134 aa18.91■□□□□ 0.62
PHGDH-230ENST00000641927 CNTN3Q9P232 1028 aa18.91■□□□□ 0.62
PHGDH-230ENST00000641927 GIT1Q9Y2X7 761 aa18.91■□□□□ 0.62
PHGDH-230ENST00000641927 CITO14578 2027 aa18.91■□□□□ 0.62
PHGDH-230ENST00000641927 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.9■□□□□ 0.62
PHGDH-230ENST00000641927 ARL5CA6NH57 179 aa18.9■□□□□ 0.62
PHGDH-230ENST00000641927 N4BP1O75113 896 aaKnown RBP18.9■□□□□ 0.62
PHGDH-230ENST00000641927 PHACTR2O75167 634 aa18.9■□□□□ 0.62
PHGDH-230ENST00000641927 TNNC2P02585 160 aa18.9■□□□□ 0.62
PHGDH-230ENST00000641927 ACTN1P12814 892 aa18.9■□□□□ 0.62
PHGDH-230ENST00000641927 FAM189BP81408 668 aa18.9■□□□□ 0.62
PHGDH-230ENST00000641927 CETN1Q12798 172 aa18.9■□□□□ 0.62
PHGDH-230ENST00000641927 KRT39Q6A163 491 aa18.9■□□□□ 0.62
PHGDH-230ENST00000641927 ALKAL1Q6UXT8 129 aa18.9■□□□□ 0.62
PHGDH-230ENST00000641927 ZNF598Q86UK7 904 aaKnown RBP18.9■□□□□ 0.62
PHGDH-230ENST00000641927 CACTINQ8WUQ7 758 aaKnown RBP18.9■□□□□ 0.62
PHGDH-230ENST00000641927 CRACR2AQ9BSW2 395 aa18.9■□□□□ 0.62
PHGDH-230ENST00000641927 TMEM161AQ9NX61 479 aa18.9■□□□□ 0.62
PHGDH-230ENST00000641927 INPP5FQ9Y2H2 1132 aa18.9■□□□□ 0.62
PHGDH-230ENST00000641927 ABHD14A-ACY1A0A1B0GW23 586 aa18.89■□□□□ 0.61
PHGDH-230ENST00000641927 CLSTN1O94985 981 aa18.89■□□□□ 0.61
PHGDH-230ENST00000641927 AP3M2P53677 418 aa18.89■□□□□ 0.61
PHGDH-230ENST00000641927 MCCD1P59942 119 aaPredicted RBP18.89■□□□□ 0.61
PHGDH-230ENST00000641927 GLB1LQ6UWU2 654 aa18.89■□□□□ 0.61
PHGDH-230ENST00000641927 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.89■□□□□ 0.61
PHGDH-230ENST00000641927 SV2AQ7L0J3 742 aa18.89■□□□□ 0.61
PHGDH-230ENST00000641927 OTOP2Q7RTS6 562 aa18.89■□□□□ 0.61
PHGDH-230ENST00000641927 ZMAT2Q96NC0 199 aaKnown RBP18.89■□□□□ 0.61
PHGDH-230ENST00000641927 C2CD2Q9Y426 696 aa18.89■□□□□ 0.61
PHGDH-230ENST00000641927 ANK1P16157 1881 aa18.89■□□□□ 0.61
PHGDH-230ENST00000641927 SMIM28A0A1B0GU29 152 aa18.89■□□□□ 0.61
PHGDH-230ENST00000641927 UPP2O95045 317 aa18.89■□□□□ 0.61
PHGDH-230ENST00000641927 FGFR1P11362 822 aa18.89■□□□□ 0.61
PHGDH-230ENST00000641927 SYCP1Q15431 976 aa18.89■□□□□ 0.61
PHGDH-230ENST00000641927 TDRD10Q5VZ19 366 aaKnown RBP18.89■□□□□ 0.61
PHGDH-230ENST00000641927 GBP6Q6ZN66 633 aa18.89■□□□□ 0.61
PHGDH-230ENST00000641927 DRC7Q8IY82 874 aa18.89■□□□□ 0.61
PHGDH-230ENST00000641927 ABI1Q8IZP0 508 aa18.89■□□□□ 0.61
PHGDH-230ENST00000641927 MRFAP1L1Q96HT8 127 aa18.89■□□□□ 0.61
PHGDH-230ENST00000641927 ELAC1Q9H777 363 aaKnown RBP18.89■□□□□ 0.61
PHGDH-230ENST00000641927 GCNT4Q9P109 453 aa18.89■□□□□ 0.61
PHGDH-230ENST00000641927 DERAQ9Y315 318 aa18.89■□□□□ 0.61
PHGDH-230ENST00000641927 NR2E3Q9Y5X4 410 aa18.89■□□□□ 0.61
PHGDH-230ENST00000641927 FGBP02675 491 aa18.88■□□□□ 0.61
PHGDH-230ENST00000641927 C4BPAP04003 597 aaKnown RBP18.88■□□□□ 0.61
PHGDH-230ENST00000641927 KCNE1P15382 129 aa18.88■□□□□ 0.61
PHGDH-230ENST00000641927 PIK3CAP42336 1068 aa18.88■□□□□ 0.61
PHGDH-230ENST00000641927 SCNN1GP51170 649 aa18.88■□□□□ 0.61
PHGDH-230ENST00000641927 EXOC3L4Q17RC7 722 aa18.88■□□□□ 0.61
PHGDH-230ENST00000641927 ZACNQ401N2 412 aa18.88■□□□□ 0.61
PHGDH-230ENST00000641927 TRAPPC11Q7Z392 1133 aa18.88■□□□□ 0.61
PHGDH-230ENST00000641927 NT5DC4Q86YG4 428 aa18.88■□□□□ 0.61
PHGDH-230ENST00000641927 HELQQ8TDG4 1101 aa18.88■□□□□ 0.61
PHGDH-230ENST00000641927 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.88■□□□□ 0.612e-6■■■■□ 25.6
PHGDH-230ENST00000641927 RNF216Q9NWF9 866 aaPredicted RBP18.88■□□□□ 0.61
PHGDH-230ENST00000641927 RALGAPA2Q2PPJ7 1873 aa18.87■□□□□ 0.61
PHGDH-230ENST00000641927 ZBBXA8MT70 800 aa18.87■□□□□ 0.61
PHGDH-230ENST00000641927 PTGESO14684 152 aa18.87■□□□□ 0.61
PHGDH-230ENST00000641927 EFCAB14O75071 495 aa18.87■□□□□ 0.61
PHGDH-230ENST00000641927 POMCP01189 267 aa18.87■□□□□ 0.61
PHGDH-230ENST00000641927 AMHP03971 560 aa18.87■□□□□ 0.61
PHGDH-230ENST00000641927 KRT19P08727 400 aa18.87■□□□□ 0.61
PHGDH-230ENST00000641927 KCNJ6P48051 423 aa18.87■□□□□ 0.61
PHGDH-230ENST00000641927 AFF1P51825 1210 aaKnown RBP18.87■□□□□ 0.61
PHGDH-230ENST00000641927 XKR4Q5GH76 650 aa18.87■□□□□ 0.61
PHGDH-230ENST00000641927 ZNF365Q70YC5 407 aa18.87■□□□□ 0.61
PHGDH-230ENST00000641927 FBXL13Q8NEE6 735 aa18.87■□□□□ 0.61
PHGDH-230ENST00000641927 BEST2Q8NFU1 509 aa18.87■□□□□ 0.61
PHGDH-230ENST00000641927 TAS1R2Q8TE23 839 aa18.87■□□□□ 0.61
PHGDH-230ENST00000641927 C18orf25Q96B23 403 aaPredicted RBP18.87■□□□□ 0.61
PHGDH-230ENST00000641927 DPP3Q9NY33 737 aa18.87■□□□□ 0.61
PHGDH-230ENST00000641927 TUBGCP4Q9UGJ1 667 aa18.87■□□□□ 0.61
PHGDH-230ENST00000641927 UBQLN1Q9UMX0 589 aaKnown RBP18.87■□□□□ 0.61
PHGDH-230ENST00000641927 R3HCC1Q9Y3T6 440 aaKnown RBP18.87■□□□□ 0.61
PHGDH-230ENST00000641927 MICAL3Q7RTP6 2002 aa18.86■□□□□ 0.61
PHGDH-230ENST00000641927 GTPBP10A4D1E9 387 aaKnown RBP18.86■□□□□ 0.61
PHGDH-230ENST00000641927 P4HA2O15460 535 aa18.86■□□□□ 0.61
PHGDH-230ENST00000641927 XPOTO43592 962 aaKnown RBP18.86■□□□□ 0.61
PHGDH-230ENST00000641927 OFD1O75665 1012 aa18.86■□□□□ 0.61
PHGDH-230ENST00000641927 BAIAP3O94812 1187 aa18.86■□□□□ 0.61
PHGDH-230ENST00000641927 THP07101 528 aa18.86■□□□□ 0.61
PHGDH-230ENST00000641927 KLK7P49862 253 aa18.86■□□□□ 0.61
PHGDH-230ENST00000641927 GUCY2FP51841 1108 aa18.86■□□□□ 0.61
PHGDH-230ENST00000641927 TRPC3Q13507 836 aa18.86■□□□□ 0.61
PHGDH-230ENST00000641927 CLLU1OSQ5K130 101 aa18.86■□□□□ 0.61
PHGDH-230ENST00000641927 C15orf39Q6ZRI6 1047 aa18.86■□□□□ 0.61
PHGDH-230ENST00000641927 C16orf59Q7L2K0 433 aa18.86■□□□□ 0.61
PHGDH-230ENST00000641927 NPAS4Q8IUM7 802 aa18.86■□□□□ 0.61
PHGDH-230ENST00000641927 URGCPQ8TCY9 931 aa18.86■□□□□ 0.61
PHGDH-230ENST00000641927 ERGIC2Q96RQ1 377 aa18.86■□□□□ 0.61
PHGDH-230ENST00000641927 TSPAN18Q96SJ8 248 aa18.86■□□□□ 0.61
PHGDH-230ENST00000641927 MIOSQ9NXC5 875 aa18.86■□□□□ 0.61
PHGDH-230ENST00000641927 PLAGL2Q9UPG8 496 aa18.86■□□□□ 0.61
PHGDH-230ENST00000641927 TRIP11Q15643 1979 aa18.86■□□□□ 0.61
PHGDH-230ENST00000641927 LTBP2Q14767 1821 aa18.86■□□□□ 0.61
PHGDH-230ENST00000641927 A0A1W2PQC6 194 aa18.85■□□□□ 0.61
PHGDH-230ENST00000641927 ITGB3P05106 788 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms