RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 CYP27A1Q02318 531 aa10.46□□□□□ -0.73
PHGDH-215ENST00000641371 NCOA4Q13772 614 aa10.46□□□□□ -0.73
PHGDH-215ENST00000641371 TDRD10Q5VZ19 366 aaKnown RBP10.46□□□□□ -0.73
PHGDH-215ENST00000641371 SLC27A1Q6PCB7 646 aa10.46□□□□□ -0.73
PHGDH-215ENST00000641371 RHOT2Q8IXI1 618 aa10.46□□□□□ -0.73
PHGDH-215ENST00000641371 HACE1Q8IYU2 909 aa10.46□□□□□ -0.73
PHGDH-215ENST00000641371 SLC35F6Q8N357 371 aa10.46□□□□□ -0.73
PHGDH-215ENST00000641371 SLC30A5Q8TAD4 765 aa10.46□□□□□ -0.73
PHGDH-215ENST00000641371 CTNNBL1Q8WYA6 563 aaPredicted RBP10.46□□□□□ -0.73
PHGDH-215ENST00000641371 TRIB2Q92519 343 aa10.46□□□□□ -0.73
PHGDH-215ENST00000641371 ACAP3Q96P50 834 aa10.46□□□□□ -0.73
PHGDH-215ENST00000641371 WDR24Q96S15 920 aa10.46□□□□□ -0.73
PHGDH-215ENST00000641371 AGPAT1Q99943 283 aa10.46□□□□□ -0.73
PHGDH-215ENST00000641371 SYT11Q9BT88 431 aa10.46□□□□□ -0.73
PHGDH-215ENST00000641371 HAPLN2Q9GZV7 340 aa10.46□□□□□ -0.73
PHGDH-215ENST00000641371 ADAMTS10Q9H324 1103 aa10.46□□□□□ -0.73
PHGDH-215ENST00000641371 PDZD7Q9H5P4 517 aa10.46□□□□□ -0.73
PHGDH-215ENST00000641371 TOPORSQ9NS56 1045 aaPredicted RBP10.46□□□□□ -0.73
PHGDH-215ENST00000641371 NENFQ9UMX5 172 aa10.46□□□□□ -0.73
PHGDH-215ENST00000641371 PCDHB2Q9Y5E7 798 aa10.46□□□□□ -0.73
PHGDH-215ENST00000641371 MRFAP1Q9Y605 127 aa10.46□□□□□ -0.73
PHGDH-215ENST00000641371 THSD7BQ9C0I4 1608 aa10.46□□□□□ -0.74
PHGDH-215ENST00000641371 ANK1P16157 1881 aa10.46□□□□□ -0.74
PHGDH-215ENST00000641371 MROH7Q68CQ1 1323 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 EFCAB8A8MWE9 144 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 TSPAN1O60635 241 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 CAND2O75155 1236 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 RTN2O75298 545 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 GPR32O75388 356 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 CAPN15O75808 1086 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 ASS1P00966 412 aaKnown RBP10.45□□□□□ -0.74
PHGDH-215ENST00000641371 HARSP12081 509 aaKnown RBP10.45□□□□□ -0.74
PHGDH-215ENST00000641371 ARF4P18085 180 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-215ENST00000641371 EIF4BP23588 611 aaKnown RBP10.45□□□□□ -0.74
PHGDH-215ENST00000641371 YARSP54577 528 aaKnown RBP10.45□□□□□ -0.74
PHGDH-215ENST00000641371 NOP14P78316 857 aaKnown RBP10.45□□□□□ -0.74
PHGDH-215ENST00000641371 PRKCZQ05513 592 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 CUL2Q13617 745 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 TCEAL1Q15170 157 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 GNASQ5JWF2 1037 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 PAPD7Q5XG87 772 aaKnown RBP10.45□□□□□ -0.74
PHGDH-215ENST00000641371 GJB7Q6PEY0 223 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 CATSPER4Q7RTX7 472 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 TRAPPC11Q7Z392 1133 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 ZBTB33Q86T24 672 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 RNF180Q86T96 592 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 ARHGEF19Q8IW93 802 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 SLAIN1Q8ND83 568 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 ZSWIM2Q8NEG5 633 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 EPS8L1Q8TE68 723 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 RFFLQ8WZ73 363 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 ZNF516Q92618 1163 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 SEMA4DQ92854 862 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 NIF3L1Q9GZT8 377 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 LACRTQ9GZZ8 138 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 VRTNQ9H8Y1 702 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 LCMT1Q9UIC8 334 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 ITGA11Q9UKX5 1188 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 CNTN6Q9UQ52 1028 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 PCDHGC5Q9Y5F6 944 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 SAR1BQ9Y6B6 198 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 MYH10P35580 1976 aa10.45□□□□□ -0.74
PHGDH-215ENST00000641371 NCANO14594 1321 aa10.44□□□□□ -0.74
PHGDH-215ENST00000641371 DDX3XO00571 662 aaKnown RBP eCLIP10.44□□□□□ -0.747e-18■■■□□ 16.8
PHGDH-215ENST00000641371 CES2O00748 559 aa10.44□□□□□ -0.74
PHGDH-215ENST00000641371 LRRN2O75325 713 aa10.44□□□□□ -0.74
PHGDH-215ENST00000641371 EDN1P05305 212 aa10.44□□□□□ -0.74
PHGDH-215ENST00000641371 STAG3L1P0CL83 205 aa10.44□□□□□ -0.74
PHGDH-215ENST00000641371 MYBL1P10243 752 aa10.44□□□□□ -0.74
PHGDH-215ENST00000641371 CTGFP29279 349 aa10.44□□□□□ -0.74
PHGDH-215ENST00000641371 HADHBP55084 474 aaKnown RBP10.44□□□□□ -0.74
PHGDH-215ENST00000641371 NAP1L1P55209 391 aaKnown RBP10.44□□□□□ -0.74
PHGDH-215ENST00000641371 CDR2Q01850 454 aa10.44□□□□□ -0.74
PHGDH-215ENST00000641371 APBA1Q02410 837 aa10.44□□□□□ -0.74
PHGDH-215ENST00000641371 CLUL1Q15846 466 aa10.44□□□□□ -0.74
PHGDH-215ENST00000641371 ENOX2Q16206 610 aaKnown RBP10.44□□□□□ -0.74
PHGDH-215ENST00000641371 MTERF4Q7Z6M4 381 aaKnown RBP10.44□□□□□ -0.74
PHGDH-215ENST00000641371 THNSL1Q8IYQ7 743 aa10.44□□□□□ -0.74
PHGDH-215ENST00000641371 KLHDC9Q8NEP7 349 aa10.44□□□□□ -0.74
PHGDH-215ENST00000641371 RAET1EQ8TD07 263 aa10.44□□□□□ -0.74
PHGDH-215ENST00000641371 U2AF1L4Q8WU68 220 aaKnown RBP10.44□□□□□ -0.74
PHGDH-215ENST00000641371 KREMEN1Q96MU8 473 aa10.44□□□□□ -0.74
PHGDH-215ENST00000641371 POP1Q99575 1024 aaKnown RBP10.44□□□□□ -0.74
PHGDH-215ENST00000641371 TSEN34Q9BSV6 310 aaKnown RBP10.44□□□□□ -0.74
PHGDH-215ENST00000641371 ISCUQ9H1K1 167 aa10.44□□□□□ -0.74
PHGDH-215ENST00000641371 MINDY3Q9H8M7 445 aa10.44□□□□□ -0.74
PHGDH-215ENST00000641371 CYP3A43Q9HB55 503 aa10.44□□□□□ -0.74
PHGDH-215ENST00000641371 XPNPEP3Q9NQH7 507 aa10.44□□□□□ -0.74
PHGDH-215ENST00000641371 GTF2IRD1Q9UHL9 959 aa10.44□□□□□ -0.74
PHGDH-215ENST00000641371 AJAP1Q9UKB5 411 aaPredicted RBP10.44□□□□□ -0.74
PHGDH-215ENST00000641371 GABRQQ9UN88 632 aa10.44□□□□□ -0.74
PHGDH-215ENST00000641371 MACROD2A1Z1Q3 448 aa10.43□□□□□ -0.74
PHGDH-215ENST00000641371 MOXD2PA6NHM9 499 aa10.43□□□□□ -0.74
PHGDH-215ENST00000641371 B4GALT5O43286 388 aa10.43□□□□□ -0.74
PHGDH-215ENST00000641371 FKTNO75072 461 aa10.43□□□□□ -0.74
PHGDH-215ENST00000641371 AOC2O75106 756 aa10.43□□□□□ -0.74
PHGDH-215ENST00000641371 ADAMTS4O75173 837 aa10.43□□□□□ -0.74
PHGDH-215ENST00000641371 VNN1O95497 513 aa10.43□□□□□ -0.74
PHGDH-215ENST00000641371 TBC1D8O95759 1140 aa10.43□□□□□ -0.74
PHGDH-215ENST00000641371 GJB1P08034 283 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms