RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 ZNF365Q70YC5 407 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 NPAS4Q8IUM7 802 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 WDR49Q8IV35 697 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 SLC39A7Q92504 469 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 DPF3Q92784 378 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 TOP1MTQ969P6 601 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 ZNF689Q96CS4 500 aaPredicted RBP9.89□□□□□ -0.83
SCARB2-225ENST00000640900 PGBD4Q96DM1 585 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 CGRRF1Q99675 332 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 TUBGCP2Q9BSJ2 902 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 TRIM6Q9C030 488 aaPredicted RBP9.89□□□□□ -0.83
SCARB2-225ENST00000640900 TOPORSQ9NS56 1045 aaPredicted RBP9.89□□□□□ -0.83
SCARB2-225ENST00000640900 MIOSQ9NXC5 875 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 PCDH10Q9P2E7 1040 aa9.89□□□□□ -0.83
SCARB2-225ENST00000640900 ZMYND8Q9ULU4 1186 aaPredicted RBP9.89□□□□□ -0.83
SCARB2-225ENST00000640900 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.89□□□□□ -0.83
SCARB2-225ENST00000640900 CHD9Q3L8U1 2897 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 LGALS16A8MUM7 142 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 P4HA2O15460 535 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 DGKIO75912 1065 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 FGBP02675 491 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 HARSP12081 509 aaKnown RBP9.88□□□□□ -0.83
SCARB2-225ENST00000640900 ACTN1P12814 892 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 ITGA4P13612 1032 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 SYN1P17600 705 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 CYP3A5P20815 502 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 AKAP5P24588 427 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 PBX1P40424 430 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 COPB1P53618 953 aaKnown RBP9.88□□□□□ -0.83
SCARB2-225ENST00000640900 HTRA4P83105 476 aaPredicted RBP9.88□□□□□ -0.83
SCARB2-225ENST00000640900 FANCCQ00597 558 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 DSC1Q08554 894 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 TPD52L1Q16890 204 aaPredicted RBP9.88□□□□□ -0.83
SCARB2-225ENST00000640900 TMEM132AQ24JP5 1023 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 VWA3BQ502W6 1294 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 SV2AQ7L0J3 742 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 HACE1Q8IYU2 909 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 RDH13Q8NBN7 331 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 OR5B17Q8NGF7 314 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 LMO3Q8TAP4 145 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 PHOSPHO2Q8TCD6 241 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 LPPQ93052 612 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 ZFP42Q96MM3 310 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 NAP1L5Q96NT1 182 aaPredicted RBP9.88□□□□□ -0.83
SCARB2-225ENST00000640900 CASD1Q96PB1 797 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 GAD1Q99259 594 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 POP1Q99575 1024 aaKnown RBP9.88□□□□□ -0.83
SCARB2-225ENST00000640900 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.88□□□□□ -0.83
SCARB2-225ENST00000640900 TMEM117Q9H0C3 514 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 PRO3102Q9H379 93 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 RSAD1Q9HA92 442 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 TMEM8AQ9HCN3 771 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 CXXC1Q9P0U4 656 aaPredicted RBP9.88□□□□□ -0.83
SCARB2-225ENST00000640900 PLAGL2Q9UPG8 496 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 PDE4DIPQ5VU43 2346 aa9.88□□□□□ -0.83
SCARB2-225ENST00000640900 FNDC1Q4ZHG4 1894 aaPredicted RBP9.87□□□□□ -0.83
SCARB2-225ENST00000640900 ANO9A1A5B4 782 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 GOLGA6L19H0YKK7 550 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 VNN1O95497 513 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 STAU1O95793 577 aaKnown RBP9.87□□□□□ -0.83
SCARB2-225ENST00000640900 NFICP08651 508 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 TRIM49P0CI25 452 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 TRIM49CP0CI26 452 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 KRT13P13646 458 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 LRPAP1P30533 357 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 BMP8BP34820 402 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 MATR3P43243 847 aaKnown RBP eCLIP9.87□□□□□ -0.83
SCARB2-225ENST00000640900 MAGEA10P43363 369 aaPredicted RBP9.87□□□□□ -0.83
SCARB2-225ENST00000640900 FMO5P49326 533 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 YARSP54577 528 aaKnown RBP9.87□□□□□ -0.83
SCARB2-225ENST00000640900 OSTNP61366 133 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 DEFB103AP81534 67 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 KCNH2Q12809 1159 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 CCDC40Q4G0X9 1142 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 CBWD6Q4V339 395 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 HSP90AA4PQ58FG1 418 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 CBWD3Q5JTY5 395 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 CBWD5Q5RIA9 395 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 TDRD10Q5VZ19 366 aaKnown RBP9.87□□□□□ -0.83
SCARB2-225ENST00000640900 SCARA3Q6AZY7 606 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 JADE1Q6IE81 842 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 USP37Q86T82 979 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 HS6ST3Q8IZP7 471 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 C1orf127Q8N9H9 656 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 CCDC127Q96BQ5 260 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 ERGIC2Q96RQ1 377 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 NDST4Q9H3R1 872 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 VRTNQ9H8Y1 702 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 MAGEC2Q9UBF1 373 aaPredicted RBP9.87□□□□□ -0.83
SCARB2-225ENST00000640900 SIX4Q9UIU6 781 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 PCDHB7Q9Y5E2 793 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.87□□□□□ -0.83
SCARB2-225ENST00000640900 LAMA3Q16787 3333 aa9.87□□□□□ -0.83
SCARB2-225ENST00000640900 CHD7Q9P2D1 2997 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 HOXA2O43364 376 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 STX10O60499 249 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 B4GALT3O60512 393 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 GJB5O95377 273 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 EFEMP2O95967 443 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 AFPP02771 609 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms