RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 ERVFRD-1P60508 538 aa7.98□□□□□ -1.13
SCARB2-224ENST00000640880 NKX6-1P78426 367 aaPredicted RBP7.98□□□□□ -1.13
SCARB2-224ENST00000640880 RASSF7Q02833 373 aa7.98□□□□□ -1.13
SCARB2-224ENST00000640880 RAB3GAP1Q15042 981 aa7.98□□□□□ -1.13
SCARB2-224ENST00000640880 GLIPR1L2Q4G1C9 344 aa7.98□□□□□ -1.13
SCARB2-224ENST00000640880 TMC5Q6UXY8 1006 aa7.98□□□□□ -1.13
SCARB2-224ENST00000640880 RPTNQ6XPR3 784 aa7.98□□□□□ -1.13
SCARB2-224ENST00000640880 ETV3LQ6ZN32 361 aa7.98□□□□□ -1.13
SCARB2-224ENST00000640880 HEATR3Q7Z4Q2 680 aa7.98□□□□□ -1.13
SCARB2-224ENST00000640880 SH2D3CQ8N5H7 860 aa7.98□□□□□ -1.13
SCARB2-224ENST00000640880 CCDC33Q8N5R6 958 aa7.98□□□□□ -1.13
SCARB2-224ENST00000640880 ANKS1AQ92625 1134 aa7.98□□□□□ -1.13
SCARB2-224ENST00000640880 TRIM63Q969Q1 353 aa7.98□□□□□ -1.13
SCARB2-224ENST00000640880 DDX11Q96FC9 970 aa7.98□□□□□ -1.13
SCARB2-224ENST00000640880 CLPTM1LQ96KA5 538 aa7.98□□□□□ -1.13
SCARB2-224ENST00000640880 SAGE1Q9NXZ1 904 aa7.98□□□□□ -1.13
SCARB2-224ENST00000640880 USP19O94966 1318 aa7.98□□□□□ -1.13
SCARB2-224ENST00000640880 ADGRF5Q8IZF2 1346 aa7.98□□□□□ -1.13
SCARB2-224ENST00000640880 BRD4O60885 1362 aaPredicted RBP7.97□□□□□ -1.13
SCARB2-224ENST00000640880 A0A0A6YYK5 440 aaPredicted RBP7.97□□□□□ -1.13
SCARB2-224ENST00000640880 TLR5O60602 858 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 TMEM127O75204 238 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 MPOP05164 745 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 KITP10721 976 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 RAC2P15153 192 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 TSHRP16473 764 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 SLC7A1P30825 629 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 GDNFP39905 211 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 TECP42680 631 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 NKX3-2P78367 333 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 CDC42EP1Q00587 391 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 PLS1Q14651 629 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 DGKDQ16760 1214 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 SKIDA1Q1XH10 827 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 CR1LQ2VPA4 569 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 KANK2Q63ZY3 851 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 TLDC1Q6P9B6 456 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 SLC23A3Q6PIS1 610 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 AMIGO3Q86WK7 504 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.97□□□□□ -1.13
SCARB2-224ENST00000640880 MYLIPQ8WY64 445 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 SAMD11Q96NU1 681 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 SOX7Q9BT81 388 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 MYLK2Q9H1R3 596 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 AS3MTQ9HBK9 375 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 AGO4Q9HCK5 861 aaKnown RBP7.97□□□□□ -1.13
SCARB2-224ENST00000640880 PNPLA8Q9NP80 782 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 ZNF69Q9UC07 566 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 ABCF2Q9UG63 623 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 MAGEL2Q9UJ55 1249 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 LAS1LQ9Y4W2 734 aaKnown RBP7.97□□□□□ -1.13
SCARB2-224ENST00000640880 MSH6P52701 1360 aa7.97□□□□□ -1.13
SCARB2-224ENST00000640880 XIRP1Q702N8 1843 aaKnown RBP7.96□□□□□ -1.13
SCARB2-224ENST00000640880 NRXN1Q9ULB1 1477 aa7.96□□□□□ -1.13
SCARB2-224ENST00000640880 TYRP14679 529 aa7.96□□□□□ -1.14
SCARB2-224ENST00000640880 SYN1P17600 705 aa7.96□□□□□ -1.14
SCARB2-224ENST00000640880 ADSLP30566 484 aaPredicted RBP7.96□□□□□ -1.14
SCARB2-224ENST00000640880 IL13RA1P78552 427 aa7.96□□□□□ -1.14
SCARB2-224ENST00000640880 ICA1Q05084 483 aa7.96□□□□□ -1.14
SCARB2-224ENST00000640880 PMS2P11Q13670 270 aa7.96□□□□□ -1.14
SCARB2-224ENST00000640880 MAPRE1Q15691 268 aaKnown RBP7.96□□□□□ -1.14
SCARB2-224ENST00000640880 KHDC1Q4VXA5 237 aaKnown RBP7.96□□□□□ -1.14
SCARB2-224ENST00000640880 CCDC38Q502W7 563 aa7.96□□□□□ -1.14
SCARB2-224ENST00000640880 CIAPIN1Q6FI81 312 aa7.96□□□□□ -1.14
SCARB2-224ENST00000640880 HIBCHQ6NVY1 386 aaPredicted RBP7.96□□□□□ -1.14
SCARB2-224ENST00000640880 MMS22LQ6ZRQ5 1243 aa7.96□□□□□ -1.14
SCARB2-224ENST00000640880 ALG3Q92685 438 aa7.96□□□□□ -1.14
SCARB2-224ENST00000640880 HOXB13Q92826 284 aaPredicted RBP7.96□□□□□ -1.14
SCARB2-224ENST00000640880 ARL8AQ96BM9 186 aa7.96□□□□□ -1.14
SCARB2-224ENST00000640880 DYDC2Q96IM9 177 aa7.96□□□□□ -1.14
SCARB2-224ENST00000640880 FAM167AQ96KS9 214 aa7.96□□□□□ -1.14
SCARB2-224ENST00000640880 DMRTA2Q96SC8 542 aa7.96□□□□□ -1.14
SCARB2-224ENST00000640880 VRK1Q99986 396 aaPredicted RBP7.96□□□□□ -1.14
SCARB2-224ENST00000640880 UNKQ9C0B0 810 aaKnown RBP7.96□□□□□ -1.14
SCARB2-224ENST00000640880 HAPLN2Q9GZV7 340 aa7.96□□□□□ -1.14
SCARB2-224ENST00000640880 PNPOQ9NVS9 261 aa7.96□□□□□ -1.14
SCARB2-224ENST00000640880 CPA4Q9UI42 421 aa7.96□□□□□ -1.14
SCARB2-224ENST00000640880 LRRC7Q96NW7 1537 aa7.96□□□□□ -1.14
SCARB2-224ENST00000640880 ENDOD1O94919 500 aa7.95□□□□□ -1.14
SCARB2-224ENST00000640880 BRAFP15056 766 aa7.95□□□□□ -1.14
SCARB2-224ENST00000640880 CTSSP25774 331 aa7.95□□□□□ -1.14
SCARB2-224ENST00000640880 GLRBP48167 497 aa7.95□□□□□ -1.14
SCARB2-224ENST00000640880 MAPKAPK2P49137 400 aa7.95□□□□□ -1.14
SCARB2-224ENST00000640880 GSK3AP49840 483 aa7.95□□□□□ -1.14
SCARB2-224ENST00000640880 ANTXR2P58335 489 aa7.95□□□□□ -1.14
SCARB2-224ENST00000640880 CD83Q01151 205 aa7.95□□□□□ -1.14
SCARB2-224ENST00000640880 MAP3K12Q12852 859 aa7.95□□□□□ -1.14
SCARB2-224ENST00000640880 FOXD4Q12950 439 aaPredicted RBP7.95□□□□□ -1.14
SCARB2-224ENST00000640880 TARDBPQ13148 414 aaKnown RBP eCLIP7.95□□□□□ -1.14
SCARB2-224ENST00000640880 BLMHQ13867 455 aa7.95□□□□□ -1.14
SCARB2-224ENST00000640880 DAG1Q14118 895 aa7.95□□□□□ -1.14
SCARB2-224ENST00000640880 SLC4A8Q2Y0W8 1093 aa7.95□□□□□ -1.14
SCARB2-224ENST00000640880 PLEKHN1Q494U1 663 aaPredicted RBP7.95□□□□□ -1.14
SCARB2-224ENST00000640880 PRR16Q569H4 304 aa7.95□□□□□ -1.14
SCARB2-224ENST00000640880 NKAPLQ5M9Q1 402 aa7.95□□□□□ -1.14
SCARB2-224ENST00000640880 RSPH3Q86UC2 560 aa7.95□□□□□ -1.14
SCARB2-224ENST00000640880 FAM26EQ8N5C1 309 aa7.95□□□□□ -1.14
SCARB2-224ENST00000640880 ISCA1Q9BUE6 129 aa7.95□□□□□ -1.14
SCARB2-224ENST00000640880 MANSC1Q9H8J5 431 aa7.95□□□□□ -1.14
SCARB2-224ENST00000640880 EPB41L4AQ9HCS5 686 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms