RNA–Protein interactions for RNA: ENST00000640360.1

SLC35A3-220, Transcript of solute carrier family 35 member A3, humanhuman

TSL 5

Gene SLC35A3, Length 4,437 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-220ENST00000640360 ZNF541Q9H0D2 1346 aa11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 WDR78Q5VTH9 848 aa11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 C15orf52Q6ZUT6 534 aaKnown RBP11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 ZNF395Q9H8N7 513 aaPredicted RBP11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 DMAC2Q9NW81 257 aa11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 NXF1Q9UBU9 619 aaKnown RBP11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 CTDP1Q9Y5B0 961 aaPredicted RBP11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 PRUNE2Q8WUY3 3088 aa11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 TOP3BO95985 862 aaKnown RBP11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 VIL1P09327 827 aaKnown RBP11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 FGFR1P11362 822 aa11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 QARSP47897 775 aaKnown RBP11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 IRX4P78413 519 aa11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 IFI16Q16666 785 aaKnown RBP11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 ERMARDQ5T6L9 678 aa11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 ARHGEF16Q5VV41 709 aa11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 RUFY4Q6ZNE9 571 aa11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 SYTL5Q8TDW5 730 aaPredicted RBP11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 PARD3BQ8TEW8 1205 aa11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 PRR11Q96HE9 360 aaPredicted RBP11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 PLCD4Q9BRC7 762 aa11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 NENFQ9UMX5 172 aa11.25□□□□□ -0.61
SLC35A3-220ENST00000640360 MAST2Q6P0Q8 1798 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 ZNFX1Q9P2E3 1918 aaKnown RBP11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 hCG_1984214I3L0E3 225 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 WNT10BO00744 389 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 AVILO75366 819 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 KRT16P08779 473 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 CD48P09326 243 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 TARSP26639 723 aaKnown RBP11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 MAP2K2P36507 400 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 PHKA2P46019 1235 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 MGAT5Q09328 741 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 SIX1Q15475 284 aaPredicted RBP11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 SYCE1Q8N0S2 351 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 FITM2Q8N6M3 262 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 ZNF713Q8N859 430 aaPredicted RBP11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 HELQQ8TDG4 1101 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 TMOD2Q9NZR1 351 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 DNPEPQ9ULA0 475 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 TMX2Q9Y320 296 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 NUMBLQ9Y6R0 609 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 BRD2P25440 801 aaKnown RBP11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 FOXN2P32314 431 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 CALCOCO2Q13137 446 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 P3H1Q32P28 736 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 SH3PXD2AQ5TCZ1 1133 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 CCT6BQ92526 530 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 ZNF317Q96PQ6 595 aaPredicted RBP11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 RAB20Q9NX57 234 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 ZMYND8Q9ULU4 1186 aaPredicted RBP11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 FRMPD4Q14CM0 1322 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 EME2A4GXA9 379 aaPredicted RBP11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 IGF2BP3O00425 579 aaKnown RBP eCLIP11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 ZBTB7AO95365 584 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 CBX6O95503 412 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 SSTR1P30872 391 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 PEX19P40855 299 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 Q3C1V9 767 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 PARP9Q8IXQ6 854 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 MREGQ8N565 214 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 UBL4BQ8N7F7 174 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 GMCL1Q96IK5 515 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 CEP89Q96ST8 783 aa11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 APOBEC3GQ9HC16 384 aaKnown RBP11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 METTL5Q9NRN9 209 aaKnown RBP11.24□□□□□ -0.61
SLC35A3-220ENST00000640360 MROH7Q68CQ1 1323 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 PHF2O75151 1096 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 PPFIA2O75334 1257 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 SLC20A2Q08357 652 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 CNPY4Q8N129 248 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 NLGN1Q8N2Q7 840 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 CLEC4DQ8WXI8 215 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 IDI2Q9BXS1 227 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 CARD9Q9H257 536 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 GRID1Q9ULK0 1009 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 TBX20Q9UMR3 447 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 ZNF148Q9UQR1 794 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 WDR87Q6ZQQ6 2873 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 PLIN4Q96Q06 1357 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 GRIN3BO60391 1043 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 ECEL1O95672 775 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 FOSP01100 380 aaPredicted RBP11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 CIITAP33076 1130 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 CPA2P48052 419 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 PDE6CP51160 858 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 ZC3H3Q8IXZ2 948 aaKnown RBP11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 LPIN3Q9BQK8 851 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 RAB17Q9H0T7 212 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 FBXO40Q9UH90 709 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 PCDHB4Q9Y5E5 795 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 PCDHA3Q9Y5H8 950 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 PRRC2BQ5JSZ5 2229 aaKnown RBP11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 CCDC188H7C350 402 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 PPP2R5CQ13362 524 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 NAA25Q14CX7 972 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 CNGA2Q16280 664 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 VSTM1Q6UX27 236 aa11.23□□□□□ -0.61
SLC35A3-220ENST00000640360 TMEM192Q8IY95 271 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms