RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 CTNNAL1Q9UBT7 734 aa6.5□□□□□ -1.37
NECAP1-222ENST00000640072 SRP68Q9UHB9 627 aaKnown RBP6.5□□□□□ -1.37
NECAP1-222ENST00000640072 BAG5Q9UL15 447 aa6.5□□□□□ -1.37
NECAP1-222ENST00000640072 TCHHQ07283 1943 aa6.5□□□□□ -1.37
NECAP1-222ENST00000640072 MAGEB16A2A368 324 aa6.5□□□□□ -1.37
NECAP1-222ENST00000640072 H3BRJ5 948 aa6.5□□□□□ -1.37
NECAP1-222ENST00000640072 MATN2O00339 956 aa6.5□□□□□ -1.37
NECAP1-222ENST00000640072 OPHN1O60890 802 aa6.5□□□□□ -1.37
NECAP1-222ENST00000640072 MICAL2O94851 1124 aa6.5□□□□□ -1.37
NECAP1-222ENST00000640072 BAG2O95816 211 aa6.5□□□□□ -1.37
NECAP1-222ENST00000640072 ASLP04424 464 aa6.5□□□□□ -1.37
NECAP1-222ENST00000640072 EPB41P11171 864 aaKnown RBP6.5□□□□□ -1.37
NECAP1-222ENST00000640072 P4HA1P13674 534 aa6.5□□□□□ -1.37
NECAP1-222ENST00000640072 AXLP30530 894 aa6.5□□□□□ -1.37
NECAP1-222ENST00000640072 EIF2B2P49770 351 aaKnown RBP6.5□□□□□ -1.37
NECAP1-222ENST00000640072 DCTN2Q13561 401 aaKnown RBP6.5□□□□□ -1.37
NECAP1-222ENST00000640072 CWF19L2Q2TBE0 894 aaKnown RBP6.5□□□□□ -1.37
NECAP1-222ENST00000640072 FYB2Q5VWT5 728 aa6.5□□□□□ -1.37
NECAP1-222ENST00000640072 CCNYL1Q8N7R7 359 aa6.5□□□□□ -1.37
NECAP1-222ENST00000640072 SLC9A6Q92581 669 aa6.5□□□□□ -1.37
NECAP1-222ENST00000640072 TNFRSF25Q93038 417 aa6.5□□□□□ -1.37
NECAP1-222ENST00000640072 NSMCE3Q96MG7 304 aa6.5□□□□□ -1.37
NECAP1-222ENST00000640072 RAB3IPQ96QF0 476 aaPredicted RBP6.5□□□□□ -1.37
NECAP1-222ENST00000640072 NT5C3AQ9H0P0 336 aa6.5□□□□□ -1.37
NECAP1-222ENST00000640072 IFT80Q9P2H3 777 aaPredicted RBP6.5□□□□□ -1.37
NECAP1-222ENST00000640072 FBXL21Q9UKT6 434 aa6.5□□□□□ -1.37
NECAP1-222ENST00000640072 RNF112Q9ULX5 631 aa6.5□□□□□ -1.37
NECAP1-222ENST00000640072 CHD1O14646 1710 aa6.5□□□□□ -1.37
NECAP1-222ENST00000640072 MSH6P52701 1360 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 KRT87PA6NCN2 255 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 STX16-NPEPL1H3BU86 382 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 SMPD2O60906 423 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 ZC3H11AO75152 810 aaKnown RBP eCLIP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 NIPSNAP2O75323 286 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 LRRN2O75325 713 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 ASMTLO95671 621 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 ENO2P09104 434 aaPredicted RBP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 FXR1P51114 621 aaKnown RBP eCLIP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 CLCN4P51793 760 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 ADKP55263 362 aaKnown RBP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 RACK1P63244 317 aaKnown RBP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 NFKB2Q00653 900 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 DHX9Q08211 1270 aaKnown RBP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 TRAP1Q12931 704 aaKnown RBP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 DOC2AQ14183 400 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 SPRED3Q2MJR0 410 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 ANO4Q32M45 955 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 GLE1Q53GS7 698 aaKnown RBP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 CCDC149Q6ZUS6 474 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 RALYLQ86SE5 291 aaKnown RBP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 PATL1Q86TB9 770 aaKnown RBP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 GLYCTKQ8IVS8 523 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 ANKRD13CQ8N6S4 541 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 STKLD1Q8NE28 680 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 SSH1Q8WYL5 1049 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 NMD3Q96D46 503 aaKnown RBP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 ANKRD36BP1Q96IX9 119 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 DEPDC7Q96QD5 511 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 TDRD1Q9BXT4 1180 aaKnown RBP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 TRIM10Q9UDY6 481 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 DAGLAQ9Y4D2 1042 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 YEATS2Q9ULM3 1422 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 CEP170Q5SW79 1584 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 TYW5A2RUC4 315 aaKnown RBP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 DKC1O60832 514 aaKnown RBP eCLIP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 USP1O94782 785 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 CAPNS1P04632 268 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 FYNP06241 537 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 RETP07949 1114 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 HAND2P61296 217 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 PPP2R2AP63151 447 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 PRKCEQ02156 737 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 LSAMPQ13449 338 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 R3HDM1Q15032 1099 aaKnown RBP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 PTPN21Q16825 1174 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 RNASEH2BQ5TBB1 312 aaKnown RBP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 METTL21CQ5VZV1 264 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 AAGABQ6PD74 315 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 RBM43Q6ZSC3 357 aaKnown RBP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 FASTKD5Q7L8L6 764 aaKnown RBP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 HS2ST1Q7LGA3 356 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 CYP4X1Q8N118 509 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 KIF2BQ8N4N8 673 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 UCMAQ8WVF2 138 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 PRPF31Q8WWY3 499 aaKnown RBP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 CCDC43Q96MW1 224 aaKnown RBP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 PIGSQ96S52 555 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 PIP5K1AQ99755 562 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 TRIM62Q9BVG3 475 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 GBA3Q9H227 469 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 RAD21L1Q9H4I0 556 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 TUFT1Q9NNX1 390 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 SH2B1Q9NRF2 756 aaPredicted RBP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 OLA1Q9NTK5 396 aaKnown RBP6.49□□□□□ -1.37
NECAP1-222ENST00000640072 SLC39A1Q9NY26 324 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 GGA3Q9NZ52 723 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 FNIP2Q9P278 1114 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 EPS15L1Q9UBC2 864 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 LRCH1Q9Y2L9 728 aa6.49□□□□□ -1.37
NECAP1-222ENST00000640072 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms