RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 TRIM56Q9BRZ2 755 aaKnown RBP15.19■□□□□ 0.02
SCARB2-208ENST00000638372 OSBPL8Q9BZF1 889 aa15.19■□□□□ 0.02
SCARB2-208ENST00000638372 ALG13Q9NP73 1137 aaKnown RBP15.19■□□□□ 0.02
SCARB2-208ENST00000638372 KITP10721 976 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 SARSP49591 514 aaKnown RBP15.18■□□□□ 0.02
SCARB2-208ENST00000638372 STX1BP61266 288 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 TMEM132DQ14C87 1099 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 KLHL38Q2WGJ6 581 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 ATF7IP2Q5U623 682 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 RAB44Q7Z6P3 723 aaPredicted RBP15.18■□□□□ 0.02
SCARB2-208ENST00000638372 CRLF3Q8IUI8 442 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 ATP11CQ8NB49 1132 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 HIPK4Q8NE63 616 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 SCFD2Q8WU76 684 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 PPWD1Q96BP3 646 aaKnown RBP15.18■□□□□ 0.02
SCARB2-208ENST00000638372 CASQ2O14958 399 aaPredicted RBP15.18■□□□□ 0.02
SCARB2-208ENST00000638372 RPS12P25398 132 aaKnown RBP15.18■□□□□ 0.02
SCARB2-208ENST00000638372 TCF7P36402 384 aaPredicted RBP15.18■□□□□ 0.02
SCARB2-208ENST00000638372 RBP5P82980 135 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 TAF1CQ15572 869 aaPredicted RBP15.18■□□□□ 0.02
SCARB2-208ENST00000638372 HIF1AQ16665 826 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 PID1Q7Z2X4 250 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 RBM15Q96T37 977 aaKnown RBP eCLIP15.18■□□□□ 0.02
SCARB2-208ENST00000638372 POP1Q99575 1024 aaKnown RBP15.18■□□□□ 0.02
SCARB2-208ENST00000638372 POLIQ9UNA4 740 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 PHF2O75151 1096 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 PPP1R37O75864 691 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 CYP2B6P20813 491 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 GTF2H1P32780 548 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 SMTNL2Q2TAL5 461 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 P3H1Q32P28 736 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 EFHC2Q5JST6 749 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 APOBEC3HQ6NTF7 200 aaKnown RBP15.18■□□□□ 0.02
SCARB2-208ENST00000638372 GPAT2Q6NUI2 795 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 TADA2BQ86TJ2 420 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 WDR75Q8IWA0 830 aaKnown RBP15.18■□□□□ 0.02
SCARB2-208ENST00000638372 TTC39CQ8N584 583 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 SYN2Q92777 582 aaPredicted RBP15.18■□□□□ 0.02
SCARB2-208ENST00000638372 TGS1Q96RS0 853 aaKnown RBP15.18■□□□□ 0.02
SCARB2-208ENST00000638372 FSD1LQ9BXM9 530 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 H0Y3Z8 333 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 APRTP07741 180 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 CASP2P42575 452 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 CACNB2Q08289 660 aaPredicted RBP15.18■□□□□ 0.02
SCARB2-208ENST00000638372 PDCD6IPQ8WUM4 868 aaKnown RBP15.18■□□□□ 0.02
SCARB2-208ENST00000638372 GBP5Q96PP8 586 aa15.18■□□□□ 0.02
SCARB2-208ENST00000638372 BACE1P56817 501 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 CHMP6Q96FZ7 201 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 CCDC195A0A1B0GUA6 201 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 HSPA4LO95757 839 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 NPTX2P47972 431 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 NR1H3Q13133 447 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 LONRF1Q17RB8 773 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 KCTD17Q8N5Z5 321 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 GPRASP2Q96D09 838 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 BTBD6Q96KE9 485 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 ZNF560Q96MR9 790 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 PNMA5Q96PV4 448 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 UBN1Q9NPG3 1134 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 BFARQ9NZS9 450 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 HPCAL4Q9UM19 191 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 FAM86B1E9PN63 330 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 FAM86B2P0C5J1 330 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 VCAM1P19320 739 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 SESN2P58004 480 aaPredicted RBP15.17■□□□□ 0.02
SCARB2-208ENST00000638372 SNAPC2Q13487 334 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 BIRC2Q13490 618 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 ZNF710Q8N1W2 664 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 SLC16A10Q8TF71 515 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 TNIP3Q96KP6 325 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 LCMT1Q9UIC8 334 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 DBR1Q9UK59 544 aaKnown RBP15.17■□□□□ 0.02
SCARB2-208ENST00000638372 EXTL3O43909 919 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 SOX10P56693 466 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 TAP1Q03518 808 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 KYNUQ16719 465 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 ZNF720Q7Z2F6 126 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 CHST13Q8NET6 341 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 TPCN2Q8NHX9 752 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 AGAP3Q96P47 875 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 ZIM3Q96PE6 472 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 DMGDHQ9UI17 866 aaKnown RBP15.17■□□□□ 0.02
SCARB2-208ENST00000638372 GGT7Q9UJ14 662 aa15.17■□□□□ 0.02
SCARB2-208ENST00000638372 GH1P01241 217 aa15.16■□□□□ 0.02
SCARB2-208ENST00000638372 PGK2P07205 417 aa15.16■□□□□ 0.02
SCARB2-208ENST00000638372 RFC5P40937 340 aa15.16■□□□□ 0.02
SCARB2-208ENST00000638372 TAF1BQ53T94 588 aaPredicted RBP15.16■□□□□ 0.02
SCARB2-208ENST00000638372 XRRA1Q6P2D8 792 aa15.16■□□□□ 0.02
SCARB2-208ENST00000638372 GBP7Q8N8V2 638 aaPredicted RBP15.16■□□□□ 0.02
SCARB2-208ENST00000638372 ATXN7L3BQ96GX2 97 aa15.16■□□□□ 0.02
SCARB2-208ENST00000638372 PPP1R9AQ9ULJ8 1098 aa15.16■□□□□ 0.02
SCARB2-208ENST00000638372 BRD2P25440 801 aaKnown RBP15.16■□□□□ 0.02
SCARB2-208ENST00000638372 BYSLQ13895 437 aaKnown RBP15.16■□□□□ 0.02
SCARB2-208ENST00000638372 FIGNQ5HY92 759 aa15.16■□□□□ 0.02
SCARB2-208ENST00000638372 KCNK18Q7Z418 384 aa15.16■□□□□ 0.02
SCARB2-208ENST00000638372 AKT1S1Q96B36 256 aa15.16■□□□□ 0.02
SCARB2-208ENST00000638372 TRAIPQ9BWF2 469 aa15.16■□□□□ 0.02
SCARB2-208ENST00000638372 VIPAS39Q9H9C1 493 aa15.16■□□□□ 0.02
SCARB2-208ENST00000638372 RAB6BQ9NRW1 208 aa15.16■□□□□ 0.02
SCARB2-208ENST00000638372 ERAP1Q9NZ08 941 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms