RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 FGFR1OP2Q9NVK5 253 aa21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 SPDYE2BA6NHP3 402 aa21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 SPDYE6P0CI01 402 aa21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 CAP2P40123 477 aa21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 PSMC5P62195 406 aa21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 GCNT1Q02742 428 aa21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 ATL2Q8NHH9 583 aa21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 MGARPQ8TDB4 240 aa21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 C7orf43Q8WVR3 580 aa21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 CKAP2Q8WWK9 683 aa21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 DHX38Q92620 1227 aaKnown RBP21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 ANKEF1Q9NU02 776 aa21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 TRPC5Q9UL62 973 aaPredicted RBP21.46■■□□□ 1.03
SYNGAP1-227ENST00000638142 O00370 1275 aa21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 NFIBO00712 420 aa21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 THAP12O43422 761 aa21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 UNGP13051 313 aaPredicted RBP21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 SCP2P22307 547 aa21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 MRPS9P82933 396 aaKnown RBP21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 CENPCQ03188 943 aa21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 E2F5Q15329 346 aa21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 LLGL1Q15334 1064 aa21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 UGCGQ16739 394 aa21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 MCOLN2Q8IZK6 566 aa21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 ATG4AQ8WYN0 398 aa21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 TMEM150BA6NC51 233 aa21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 ZC3H11AO75152 810 aaKnown RBP eCLIP21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 UBOX5O94941 541 aa21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 KRT5P13647 590 aa21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 NPTX2P47972 431 aa21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 ENPEPQ07075 957 aa21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 MKRN3Q13064 507 aaKnown RBP21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 DMP1Q13316 513 aaPredicted RBP21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 GALNTL6Q49A17 601 aa21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 XKR9Q5GH70 373 aa21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 CLEC4DQ8WXI8 215 aa21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 TOPORSQ9NS56 1045 aaPredicted RBP21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 BAIAP2L1Q9UHR4 511 aa21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 LGALS13Q9UHV8 139 aa21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 ANAPC5Q9UJX4 755 aa21.45■■□□□ 1.02
SYNGAP1-227ENST00000638142 CLRN2A0PK11 232 aa21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 H0YIN7 160 aa21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 CREB1P16220 341 aa21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 JAK3P52333 1124 aa21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 CYP24A1Q07973 514 aa21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 PTP4A2Q12974 167 aa21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 KYNUQ16719 465 aa21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 TBC1D10BQ4KMP7 808 aaPredicted RBP21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 NUGGCQ68CJ6 796 aa21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 SV2AQ7L0J3 742 aa21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 TBC1D1Q86TI0 1168 aaPredicted RBP21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 BBOF1Q8ND07 529 aa21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 TCP11Q8WWU5 503 aa21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 KCNK9Q9NPC2 374 aa21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 AGAP1Q9UPQ3 857 aa21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 MROH7Q68CQ1 1323 aa21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 MKRN4PQ13434 485 aaPredicted RBP21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 ZNF268Q14587 947 aaPredicted RBP21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 ZNF677Q86XU0 584 aa21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 MIEF2Q96C03 454 aa21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 DDX27Q96GQ7 796 aaKnown RBP21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 NINJ2Q9NZG7 142 aa21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 ZNF219Q9P2Y4 722 aaPredicted RBP21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 ZNF70Q9UC06 446 aaPredicted RBP21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 ARL2BPQ9Y2Y0 163 aa21.44■■□□□ 1.02
SYNGAP1-227ENST00000638142 DENND3A2RUS2 1198 aa21.43■■□□□ 1.02
SYNGAP1-227ENST00000638142 GJB6O95452 261 aa21.43■■□□□ 1.02
SYNGAP1-227ENST00000638142 BRAFP15056 766 aa21.43■■□□□ 1.02
SYNGAP1-227ENST00000638142 ADCY8P40145 1251 aa21.43■■□□□ 1.02
SYNGAP1-227ENST00000638142 NCALDP61601 193 aa21.43■■□□□ 1.02
SYNGAP1-227ENST00000638142 CCHCR1Q8TD31 782 aa21.43■■□□□ 1.02
SYNGAP1-227ENST00000638142 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.43■■□□□ 1.02
SYNGAP1-227ENST00000638142 CTNNAL1Q9UBT7 734 aa21.43■■□□□ 1.02
SYNGAP1-227ENST00000638142 ADGRA3Q8IWK6 1321 aa21.43■■□□□ 1.02
SYNGAP1-227ENST00000638142 TBC1D12O60347 775 aa21.43■■□□□ 1.02
SYNGAP1-227ENST00000638142 CLTAP09496 248 aa21.43■■□□□ 1.02
SYNGAP1-227ENST00000638142 SFNP31947 248 aa21.43■■□□□ 1.02
SYNGAP1-227ENST00000638142 SPATA21Q7Z572 469 aa21.43■■□□□ 1.02
SYNGAP1-227ENST00000638142 PNMA8AQ86V59 439 aaPredicted RBP21.43■■□□□ 1.02
SYNGAP1-227ENST00000638142 RELL1Q8IUW5 271 aa21.43■■□□□ 1.02
SYNGAP1-227ENST00000638142 ANKRD42Q8N9B4 389 aa21.43■■□□□ 1.02
SYNGAP1-227ENST00000638142 SPIRE2Q8WWL2 714 aa21.43■■□□□ 1.02
SYNGAP1-227ENST00000638142 HERPUD2Q9BSE4 406 aa21.43■■□□□ 1.02
SYNGAP1-227ENST00000638142 KMT5AQ9NQR1 393 aa21.43■■□□□ 1.02
SYNGAP1-227ENST00000638142 YDJCA8MPS7 323 aa21.42■■□□□ 1.02
SYNGAP1-227ENST00000638142 WDR64B1ANS9 1081 aa21.42■■□□□ 1.02
SYNGAP1-227ENST00000638142 CDH16O75309 829 aa21.42■■□□□ 1.02
SYNGAP1-227ENST00000638142 NQO1P15559 274 aaKnown RBP21.42■■□□□ 1.02
SYNGAP1-227ENST00000638142 CRYMQ14894 314 aa21.42■■□□□ 1.02
SYNGAP1-227ENST00000638142 TRIP13Q15645 432 aaPredicted RBP21.42■■□□□ 1.02
SYNGAP1-227ENST00000638142 PLA2G4FQ68DD2 849 aa21.42■■□□□ 1.02
SYNGAP1-227ENST00000638142 ARHGEF18Q6ZSZ5 1173 aa21.42■■□□□ 1.02
SYNGAP1-227ENST00000638142 KIFC3Q9BVG8 833 aa21.42■■□□□ 1.02
SYNGAP1-227ENST00000638142 TRIM7Q9C029 511 aa21.42■■□□□ 1.02
SYNGAP1-227ENST00000638142 MAP3K20Q9NYL2 800 aaKnown RBP21.42■■□□□ 1.02
SYNGAP1-227ENST00000638142 TCEAL9Q9UHQ7 104 aa21.42■■□□□ 1.02
SYNGAP1-227ENST00000638142 NEU2Q9Y3R4 380 aa21.42■■□□□ 1.02
SYNGAP1-227ENST00000638142 ACTL7BQ9Y614 415 aa21.42■■□□□ 1.02
SYNGAP1-227ENST00000638142 CNTNAP1P78357 1384 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms