RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 STK38Q15208 465 aa18.31■□□□□ 0.52
CACNA1A-259ENST00000638114 PSMD5Q16401 504 aa18.31■□□□□ 0.52
CACNA1A-259ENST00000638114 UPP1Q16831 310 aa18.31■□□□□ 0.52
CACNA1A-259ENST00000638114 PIK3R5Q8WYR1 880 aa18.31■□□□□ 0.52
CACNA1A-259ENST00000638114 ZMAT2Q96NC0 199 aaKnown RBP18.31■□□□□ 0.52
CACNA1A-259ENST00000638114 CNTN3Q9P232 1028 aa18.31■□□□□ 0.52
CACNA1A-259ENST00000638114 MORC2Q9Y6X9 1032 aaPredicted RBP18.31■□□□□ 0.52
CACNA1A-259ENST00000638114 VWA8A3KMH1 1905 aa18.3■□□□□ 0.52
CACNA1A-259ENST00000638114 C2CD4DB7Z1M9 353 aa18.3■□□□□ 0.52
CACNA1A-259ENST00000638114 KCNE1P15382 129 aa18.3■□□□□ 0.52
CACNA1A-259ENST00000638114 IGFBP6P24592 240 aaPredicted RBP18.3■□□□□ 0.52
CACNA1A-259ENST00000638114 NASPP49321 788 aaPredicted RBP18.3■□□□□ 0.52
CACNA1A-259ENST00000638114 PDXDC1Q6P996 788 aa18.3■□□□□ 0.52
CACNA1A-259ENST00000638114 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.3■□□□□ 0.52
CACNA1A-259ENST00000638114 C15orf39Q6ZRI6 1047 aa18.3■□□□□ 0.52
CACNA1A-259ENST00000638114 DYMQ7RTS9 669 aa18.3■□□□□ 0.52
CACNA1A-259ENST00000638114 TDRD5Q8NAT2 981 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-259ENST00000638114 LNX1Q8TBB1 728 aaPredicted RBP18.3■□□□□ 0.52
CACNA1A-259ENST00000638114 EDAQ92838 391 aa18.3■□□□□ 0.52
CACNA1A-259ENST00000638114 KCNN1Q92952 543 aa18.3■□□□□ 0.52
CACNA1A-259ENST00000638114 DDX27Q96GQ7 796 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-259ENST00000638114 ZNF396Q96N95 335 aaPredicted RBP18.3■□□□□ 0.52
CACNA1A-259ENST00000638114 HAPLN2Q9GZV7 340 aa18.3■□□□□ 0.52
CACNA1A-259ENST00000638114 C2orf16Q68DN1 1984 aa18.3■□□□□ 0.52
CACNA1A-259ENST00000638114 CCDC195A0A1B0GUA6 201 aa18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 PODXLO00592 558 aa18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 MEFVO15553 781 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 TRAPPC3O43617 180 aa18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 RFPL2O75678 378 aa18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 CLTAP09496 248 aa18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 CXCL8P10145 99 aa18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 NMT1P30419 496 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 STAT6P42226 847 aa18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 SLC10A6Q3KNW5 377 aa18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 CCDC73Q6ZRK6 1079 aa18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 CCDC149Q6ZUS6 474 aa18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 SV2BQ7L1I2 683 aa18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 LINC00301Q8NCQ3 95 aa18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 C3orf58Q8NDZ4 430 aa18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 CMASQ8NFW8 434 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 HDAC7Q8WUI4 952 aa18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 C18orf25Q96B23 403 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 PANK2Q9BZ23 570 aa18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 PLEKHA4Q9H4M7 779 aa18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 TFIP11Q9UBB9 837 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 TRIOO75962 3097 aa18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 DENND4AQ7Z401 1863 aa18.29■□□□□ 0.52
CACNA1A-259ENST00000638114 MTCL1Q9Y4B5 1905 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-259ENST00000638114 I3L4J1 428 aa18.28■□□□□ 0.52
CACNA1A-259ENST00000638114 SPTLC2O15270 562 aa18.28■□□□□ 0.52
CACNA1A-259ENST00000638114 C1RP00736 705 aa18.28■□□□□ 0.52
CACNA1A-259ENST00000638114 PIGRP01833 764 aa18.28■□□□□ 0.52
CACNA1A-259ENST00000638114 FGFR3P22607 806 aa18.28■□□□□ 0.52
CACNA1A-259ENST00000638114 ABCD1P33897 745 aa18.28■□□□□ 0.52
CACNA1A-259ENST00000638114 BRCC3P46736 316 aa18.28■□□□□ 0.52
CACNA1A-259ENST00000638114 ZXDAP98168 799 aa18.28■□□□□ 0.52
CACNA1A-259ENST00000638114 PTPN21Q16825 1174 aa18.28■□□□□ 0.52
CACNA1A-259ENST00000638114 LILRA6Q6PI73 481 aa18.28■□□□□ 0.52
CACNA1A-259ENST00000638114 CD300LGQ6UXG3 332 aa18.28■□□□□ 0.52
CACNA1A-259ENST00000638114 SFR1Q86XK3 245 aa18.28■□□□□ 0.52
CACNA1A-259ENST00000638114 SPRYD3Q8NCJ5 442 aa18.28■□□□□ 0.52
CACNA1A-259ENST00000638114 KREMEN2Q8NCW0 462 aa18.28■□□□□ 0.52
CACNA1A-259ENST00000638114 DDX12PQ92771 950 aa18.28■□□□□ 0.52
CACNA1A-259ENST00000638114 FIZ1Q96SL8 496 aa18.28■□□□□ 0.52
CACNA1A-259ENST00000638114 CLSTN3Q9BQT9 956 aa18.28■□□□□ 0.52
CACNA1A-259ENST00000638114 HCN4Q9Y3Q4 1203 aa18.28■□□□□ 0.52
CACNA1A-259ENST00000638114 PDCD11Q14690 1871 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-259ENST00000638114 MYMKA6NI61 221 aa18.27■□□□□ 0.52
CACNA1A-259ENST00000638114 ZSCAN22P10073 491 aaPredicted RBP18.27■□□□□ 0.52
CACNA1A-259ENST00000638114 PDIA4P13667 645 aaKnown RBP18.27■□□□□ 0.52
CACNA1A-259ENST00000638114 TKTP29401 623 aaKnown RBP18.27■□□□□ 0.52
CACNA1A-259ENST00000638114 TNFSF9P41273 254 aa18.27■□□□□ 0.52
CACNA1A-259ENST00000638114 GTF2BQ00403 316 aa18.27■□□□□ 0.52
CACNA1A-259ENST00000638114 KYAT1Q16773 422 aa18.27■□□□□ 0.52
CACNA1A-259ENST00000638114 FOXD4L6Q3SYB3 417 aaPredicted RBP18.27■□□□□ 0.52
CACNA1A-259ENST00000638114 ZC2HC1CQ53FD0 456 aaPredicted RBP18.27■□□□□ 0.52
CACNA1A-259ENST00000638114 FOXD4L3Q6VB84 417 aaPredicted RBP18.27■□□□□ 0.52
CACNA1A-259ENST00000638114 MAP4K3Q8IVH8 894 aa18.27■□□□□ 0.52
CACNA1A-259ENST00000638114 PDILTQ8N807 584 aa18.27■□□□□ 0.52
CACNA1A-259ENST00000638114 SMG7Q92540 1137 aaKnown RBP18.27■□□□□ 0.52
CACNA1A-259ENST00000638114 PLEKHA5Q9HAU0 1116 aa18.27■□□□□ 0.52
CACNA1A-259ENST00000638114 PIDD1Q9HB75 910 aa18.27■□□□□ 0.52
CACNA1A-259ENST00000638114 USTQ9Y2C2 406 aa18.27■□□□□ 0.52
CACNA1A-259ENST00000638114 NUB1Q9Y5A7 615 aa18.27■□□□□ 0.52
CACNA1A-259ENST00000638114 TECTAO75443 2155 aa18.27■□□□□ 0.51
CACNA1A-259ENST00000638114 A0A087X0B3 334 aa18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 OGTO15294 1046 aa18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 ADAM12O43184 909 aa18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 RPL9P32969 192 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 PPP2R3AQ06190 1150 aa18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 SPAG1Q07617 926 aa18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 ZBTB41Q5SVQ8 909 aa18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 LIN9Q5TKA1 542 aa18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 SLC39A4Q6P5W5 647 aa18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 CYP26C1Q6V0L0 522 aa18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 TRIM67Q6ZTA4 783 aa18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 ANKS3Q6ZW76 656 aa18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 OTOP3Q7RTS5 596 aa18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 ZDHHC14Q8IZN3 488 aa18.26■□□□□ 0.51
CACNA1A-259ENST00000638114 PLCD3Q8N3E9 789 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms