RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 EDAQ92838 391 aa19.39■□□□□ 0.69
PNKP-230ENST00000638016 BICD1Q96G01 975 aa19.39■□□□□ 0.69
PNKP-230ENST00000638016 CLSTN3Q9BQT9 956 aa19.39■□□□□ 0.69
PNKP-230ENST00000638016 TTPALQ9BTX7 342 aa19.39■□□□□ 0.69
PNKP-230ENST00000638016 PARVGQ9HBI0 331 aa19.39■□□□□ 0.69
PNKP-230ENST00000638016 ZNF318Q5VUA4 2279 aa19.39■□□□□ 0.69
PNKP-230ENST00000638016 CCDC195A0A1B0GUA6 201 aa19.38■□□□□ 0.69
PNKP-230ENST00000638016 TRAK2O60296 914 aa19.38■□□□□ 0.69
PNKP-230ENST00000638016 TKTP29401 623 aaKnown RBP19.38■□□□□ 0.69
PNKP-230ENST00000638016 MATR3P43243 847 aaKnown RBP eCLIP19.38■□□□□ 0.69
PNKP-230ENST00000638016 ZXDAP98168 799 aa19.38■□□□□ 0.69
PNKP-230ENST00000638016 MCL1Q07820 350 aa19.38■□□□□ 0.69
PNKP-230ENST00000638016 PSMD5Q16401 504 aa19.38■□□□□ 0.69
PNKP-230ENST00000638016 FOXD4L6Q3SYB3 417 aaPredicted RBP19.38■□□□□ 0.69
PNKP-230ENST00000638016 ZC2HC1CQ53FD0 456 aaPredicted RBP19.38■□□□□ 0.69
PNKP-230ENST00000638016 SLC39A4Q6P5W5 647 aa19.38■□□□□ 0.69
PNKP-230ENST00000638016 LILRA6Q6PI73 481 aa19.38■□□□□ 0.69
PNKP-230ENST00000638016 RSPO2Q6UXX9 243 aaPredicted RBP19.38■□□□□ 0.69
PNKP-230ENST00000638016 FOXD4L3Q6VB84 417 aaPredicted RBP19.38■□□□□ 0.69
PNKP-230ENST00000638016 ZPBP2Q6X784 338 aa19.38■□□□□ 0.69
PNKP-230ENST00000638016 PIK3R5Q8WYR1 880 aa19.38■□□□□ 0.69
PNKP-230ENST00000638016 ZNF707Q96C28 371 aaPredicted RBP19.38■□□□□ 0.69
PNKP-230ENST00000638016 PANK2Q9BZ23 570 aa19.38■□□□□ 0.69
PNKP-230ENST00000638016 TOPORSQ9NS56 1045 aaPredicted RBP19.38■□□□□ 0.69
PNKP-230ENST00000638016 CNTN3Q9P232 1028 aa19.38■□□□□ 0.69
PNKP-230ENST00000638016 FNIP2Q9P278 1114 aa19.38■□□□□ 0.69
PNKP-230ENST00000638016 TFIP11Q9UBB9 837 aaKnown RBP19.38■□□□□ 0.69
PNKP-230ENST00000638016 TUBGCP4Q9UGJ1 667 aa19.38■□□□□ 0.69
PNKP-230ENST00000638016 TBX20Q9UMR3 447 aa19.38■□□□□ 0.69
PNKP-230ENST00000638016 DOCK8Q8NF50 2099 aa19.37■□□□□ 0.69
PNKP-230ENST00000638016 MYMKA6NI61 221 aa19.37■□□□□ 0.69
PNKP-230ENST00000638016 TMEM189-UBE2V1I3L0A0 370 aa19.37■□□□□ 0.69
PNKP-230ENST00000638016 PODXLO00592 558 aa19.37■□□□□ 0.69
PNKP-230ENST00000638016 CLDN3O15551 220 aa19.37■□□□□ 0.69
PNKP-230ENST00000638016 TBCAO75347 108 aaKnown RBP19.37■□□□□ 0.69
PNKP-230ENST00000638016 DDIT3P35638 169 aa19.37■□□□□ 0.69
PNKP-230ENST00000638016 PKP1Q13835 747 aa19.37■□□□□ 0.69
PNKP-230ENST00000638016 SLC39A14Q15043 492 aa19.37■□□□□ 0.69
PNKP-230ENST00000638016 PTPN21Q16825 1174 aa19.37■□□□□ 0.69
PNKP-230ENST00000638016 DCLRE1AQ6PJP8 1040 aa19.37■□□□□ 0.69
PNKP-230ENST00000638016 SFR1Q86XK3 245 aa19.37■□□□□ 0.69
PNKP-230ENST00000638016 HSCBQ8IWL3 235 aa19.37■□□□□ 0.69
PNKP-230ENST00000638016 TDRD5Q8NAT2 981 aaKnown RBP19.37■□□□□ 0.69
PNKP-230ENST00000638016 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.37■□□□□ 0.69
PNKP-230ENST00000638016 NR2E1Q9Y466 385 aa19.37■□□□□ 0.69
PNKP-230ENST00000638016 ZDBF2Q9HCK1 2354 aa19.37■□□□□ 0.69
PNKP-230ENST00000638016 HNRNPDLO14979 420 aaKnown RBP19.36■□□□□ 0.69
PNKP-230ENST00000638016 FAM189A1O60320 539 aa19.36■□□□□ 0.69
PNKP-230ENST00000638016 N4BP1O75113 896 aaKnown RBP19.36■□□□□ 0.69
PNKP-230ENST00000638016 KCNE1P15382 129 aa19.36■□□□□ 0.69
PNKP-230ENST00000638016 FGFR3P22607 806 aa19.36■□□□□ 0.69
PNKP-230ENST00000638016 NASPP49321 788 aaPredicted RBP19.36■□□□□ 0.69
PNKP-230ENST00000638016 LIG4P49917 911 aa19.36■□□□□ 0.69
PNKP-230ENST00000638016 TRIM67Q6ZTA4 783 aa19.36■□□□□ 0.69
PNKP-230ENST00000638016 KREMEN2Q8NCW0 462 aa19.36■□□□□ 0.69
PNKP-230ENST00000638016 DDX27Q96GQ7 796 aaKnown RBP19.36■□□□□ 0.69
PNKP-230ENST00000638016 LIMD1Q9UGP4 676 aa19.36■□□□□ 0.69
PNKP-230ENST00000638016 MUC6Q6W4X9 2439 aa19.35■□□□□ 0.69
PNKP-230ENST00000638016 ANKRD63C9JTQ0 380 aa19.35■□□□□ 0.69
PNKP-230ENST00000638016 GUCY2FP51841 1108 aa19.35■□□□□ 0.69
PNKP-230ENST00000638016 RRAGBQ5VZM2 374 aa19.35■□□□□ 0.69
PNKP-230ENST00000638016 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.35■□□□□ 0.69
PNKP-230ENST00000638016 C15orf39Q6ZRI6 1047 aa19.35■□□□□ 0.69
PNKP-230ENST00000638016 CCDC149Q6ZUS6 474 aa19.35■□□□□ 0.69
PNKP-230ENST00000638016 GPR65Q8IYL9 337 aa19.35■□□□□ 0.69
PNKP-230ENST00000638016 PDILTQ8N807 584 aa19.35■□□□□ 0.69
PNKP-230ENST00000638016 KRI1Q8N9T8 703 aaKnown RBP19.35■□□□□ 0.69
PNKP-230ENST00000638016 LINC00301Q8NCQ3 95 aa19.35■□□□□ 0.69
PNKP-230ENST00000638016 CMASQ8NFW8 434 aaPredicted RBP19.35■□□□□ 0.69
PNKP-230ENST00000638016 SMG7Q92540 1137 aaKnown RBP19.35■□□□□ 0.69
PNKP-230ENST00000638016 DDX12PQ92771 950 aa19.35■□□□□ 0.69
PNKP-230ENST00000638016 KCNN1Q92952 543 aa19.35■□□□□ 0.69
PNKP-230ENST00000638016 UROC1Q96N76 676 aa19.35■□□□□ 0.69
PNKP-230ENST00000638016 ZSCAN16Q9H4T2 348 aaPredicted RBP19.35■□□□□ 0.69
PNKP-230ENST00000638016 TBC1D7Q9P0N9 293 aa19.35■□□□□ 0.69
PNKP-230ENST00000638016 STK17AQ9UEE5 414 aa19.35■□□□□ 0.69
PNKP-230ENST00000638016 CCDC39Q9UFE4 941 aa19.35■□□□□ 0.69
PNKP-230ENST00000638016 FBXW11Q9UKB1 542 aa19.35■□□□□ 0.69
PNKP-230ENST00000638016 ANK1P16157 1881 aa19.35■□□□□ 0.69
PNKP-230ENST00000638016 TMEM221A6NGB7 291 aa19.34■□□□□ 0.69
PNKP-230ENST00000638016 M0R296 226 aa19.34■□□□□ 0.69
PNKP-230ENST00000638016 PIGRP01833 764 aa19.34■□□□□ 0.69
PNKP-230ENST00000638016 ELAVL2Q12926 359 aaKnown RBP19.34■□□□□ 0.69
PNKP-230ENST00000638016 STK38Q15208 465 aa19.34■□□□□ 0.69
PNKP-230ENST00000638016 ENOX2Q16206 610 aaKnown RBP19.34■□□□□ 0.69
PNKP-230ENST00000638016 ST13P5Q8NFI4 369 aaPredicted RBP19.34■□□□□ 0.69
PNKP-230ENST00000638016 STAMQ92783 540 aa19.34■□□□□ 0.69
PNKP-230ENST00000638016 DNAJC19Q96DA6 116 aa19.34■□□□□ 0.69
PNKP-230ENST00000638016 ASIC4Q96FT7 647 aa19.34■□□□□ 0.69
PNKP-230ENST00000638016 FGFBP2Q9BYJ0 223 aa19.34■□□□□ 0.69
PNKP-230ENST00000638016 SLC38A7Q9NVC3 462 aa19.34■□□□□ 0.69
PNKP-230ENST00000638016 KCNG1Q9UIX4 513 aa19.34■□□□□ 0.69
PNKP-230ENST00000638016 TTC26A0AVF1 554 aa19.33■□□□□ 0.68
PNKP-230ENST00000638016 H0YCG3 227 aa19.33■□□□□ 0.68
PNKP-230ENST00000638016 PDGFBP01127 241 aaPredicted RBP19.33■□□□□ 0.68
PNKP-230ENST00000638016 OR1D2P34982 312 aa19.33■□□□□ 0.68
PNKP-230ENST00000638016 NTHL1P78549 312 aa19.33■□□□□ 0.68
PNKP-230ENST00000638016 GTF2BQ00403 316 aa19.33■□□□□ 0.68
PNKP-230ENST00000638016 CREMQ03060 361 aa19.33■□□□□ 0.68
PNKP-230ENST00000638016 KCNA1Q09470 495 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms