RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 NXF3Q9H4D5 531 aaKnown RBP14.48□□□□□ -0.09
LINC00643-207ENST00000637212 MMRN2Q9H8L6 949 aa14.48□□□□□ -0.09
LINC00643-207ENST00000637212 HES2Q9Y543 173 aa14.48□□□□□ -0.09
LINC00643-207ENST00000637212 SIP14410 1827 aa14.48□□□□□ -0.09
LINC00643-207ENST00000637212 XPOTO43592 962 aaKnown RBP14.47□□□□□ -0.09
LINC00643-207ENST00000637212 ZC3H11AO75152 810 aaKnown RBP eCLIP14.47□□□□□ -0.09
LINC00643-207ENST00000637212 RECQL4O94761 1208 aa14.47□□□□□ -0.09
LINC00643-207ENST00000637212 AKAP5P24588 427 aa14.47□□□□□ -0.09
LINC00643-207ENST00000637212 WNT7BP56706 349 aa14.47□□□□□ -0.09
LINC00643-207ENST00000637212 IKBKEQ14164 716 aa14.47□□□□□ -0.09
LINC00643-207ENST00000637212 EPC2Q52LR7 807 aa14.47□□□□□ -0.09
LINC00643-207ENST00000637212 JADE1Q6IE81 842 aa14.47□□□□□ -0.09
LINC00643-207ENST00000637212 TRAPPC11Q7Z392 1133 aa14.47□□□□□ -0.09
LINC00643-207ENST00000637212 TMC6Q7Z403 805 aa14.47□□□□□ -0.09
LINC00643-207ENST00000637212 ZNF598Q86UK7 904 aaKnown RBP14.47□□□□□ -0.09
LINC00643-207ENST00000637212 PPFIBP1Q86W92 1011 aa14.47□□□□□ -0.09
LINC00643-207ENST00000637212 FBXL13Q8NEE6 735 aa14.47□□□□□ -0.09
LINC00643-207ENST00000637212 LMO3Q8TAP4 145 aa14.47□□□□□ -0.09
LINC00643-207ENST00000637212 RSPH1Q8WYR4 309 aa14.47□□□□□ -0.09
LINC00643-207ENST00000637212 PCMTD1Q96MG8 357 aaPredicted RBP14.47□□□□□ -0.09
LINC00643-207ENST00000637212 RAB20Q9NX57 234 aa14.47□□□□□ -0.09
LINC00643-207ENST00000637212 PRKAG2Q9UGJ0 569 aa14.47□□□□□ -0.09
LINC00643-207ENST00000637212 FBXL5Q9UKA1 691 aa14.47□□□□□ -0.09
LINC00643-207ENST00000637212 TRIP12Q14669 1992 aaPredicted RBP14.47□□□□□ -0.09
LINC00643-207ENST00000637212 SMIM28A0A1B0GU29 152 aa14.46□□□□□ -0.09
LINC00643-207ENST00000637212 A0A1W2PQJ5 194 aa14.46□□□□□ -0.09
LINC00643-207ENST00000637212 TULP1O00294 542 aaPredicted RBP14.46□□□□□ -0.09
LINC00643-207ENST00000637212 INPPL1O15357 1258 aa14.46□□□□□ -0.09
LINC00643-207ENST00000637212 PHACTR2O75167 634 aa14.46□□□□□ -0.09
LINC00643-207ENST00000637212 TPM1P09493 284 aa14.46□□□□□ -0.09
LINC00643-207ENST00000637212 TMEM191BP0C7N4 346 aa14.46□□□□□ -0.09
LINC00643-207ENST00000637212 SLC9A1P19634 815 aa14.46□□□□□ -0.09
LINC00643-207ENST00000637212 CYP3A5P20815 502 aa14.46□□□□□ -0.09
LINC00643-207ENST00000637212 GSDMDP57764 484 aa14.46□□□□□ -0.09
LINC00643-207ENST00000637212 TFAMQ00059 246 aaKnown RBP14.46□□□□□ -0.09
LINC00643-207ENST00000637212 TMEM132DQ14C87 1099 aa14.46□□□□□ -0.09
LINC00643-207ENST00000637212 DPY19L2P1Q6NXN4 242 aa14.46□□□□□ -0.09
LINC00643-207ENST00000637212 CNKSR3Q6P9H4 555 aa14.46□□□□□ -0.09
LINC00643-207ENST00000637212 AGMOQ6ZNB7 445 aa14.46□□□□□ -0.09
LINC00643-207ENST00000637212 NEK11Q8NG66 645 aa14.46□□□□□ -0.09
LINC00643-207ENST00000637212 OR5B17Q8NGF7 314 aa14.46□□□□□ -0.09
LINC00643-207ENST00000637212 FAXDC2Q96IV6 333 aa14.46□□□□□ -0.09
LINC00643-207ENST00000637212 FAM81BQ96LP2 452 aa14.46□□□□□ -0.09
LINC00643-207ENST00000637212 CRACR2AQ9BSW2 395 aa14.46□□□□□ -0.09
LINC00643-207ENST00000637212 APOL6Q9BWW8 343 aa14.46□□□□□ -0.09
LINC00643-207ENST00000637212 INTS2Q9H0H0 1204 aaKnown RBP14.46□□□□□ -0.09
LINC00643-207ENST00000637212 PRDM5Q9NQX1 630 aaPredicted RBP14.46□□□□□ -0.09
LINC00643-207ENST00000637212 CAPN11Q9UMQ6 739 aa14.46□□□□□ -0.09
LINC00643-207ENST00000637212 CENPFP49454 3210 aa14.45□□□□□ -0.1
LINC00643-207ENST00000637212 PTPRJQ12913 1337 aa14.45□□□□□ -0.1
LINC00643-207ENST00000637212 ABHD14A-ACY1A0A1B0GW23 586 aa14.45□□□□□ -0.1
LINC00643-207ENST00000637212 EFCAB14O75071 495 aa14.45□□□□□ -0.1
LINC00643-207ENST00000637212 ATICP31939 592 aa14.45□□□□□ -0.1
LINC00643-207ENST00000637212 RBP5P82980 135 aa14.45□□□□□ -0.1
LINC00643-207ENST00000637212 BIRC3Q13489 604 aa14.45□□□□□ -0.1
LINC00643-207ENST00000637212 SGSM1Q2NKQ1 1148 aa14.45□□□□□ -0.1
LINC00643-207ENST00000637212 WDR44Q5JSH3 913 aa14.45□□□□□ -0.1
LINC00643-207ENST00000637212 KLHDC7AQ5VTJ3 777 aa14.45□□□□□ -0.1
LINC00643-207ENST00000637212 TDRD10Q5VZ19 366 aaKnown RBP14.45□□□□□ -0.1
LINC00643-207ENST00000637212 TRIM65Q6PJ69 517 aa14.45□□□□□ -0.1
LINC00643-207ENST00000637212 EFCAB13Q8IY85 973 aa14.45□□□□□ -0.1
LINC00643-207ENST00000637212 ZNF397Q8NF99 534 aaPredicted RBP14.45□□□□□ -0.1
LINC00643-207ENST00000637212 BEST2Q8NFU1 509 aa14.45□□□□□ -0.1
LINC00643-207ENST00000637212 TAS1R2Q8TE23 839 aa14.45□□□□□ -0.1
LINC00643-207ENST00000637212 TAF4BQ92750 862 aa14.45□□□□□ -0.1
LINC00643-207ENST00000637212 KIF12Q96FN5 646 aa14.45□□□□□ -0.1
LINC00643-207ENST00000637212 LSM14BQ9BX40 385 aaKnown RBP14.45□□□□□ -0.1
LINC00643-207ENST00000637212 SLC38A7Q9NVC3 462 aa14.45□□□□□ -0.1
LINC00643-207ENST00000637212 TMEM161AQ9NX61 479 aa14.45□□□□□ -0.1
LINC00643-207ENST00000637212 GCNT4Q9P109 453 aa14.45□□□□□ -0.1
LINC00643-207ENST00000637212 ITGA11Q9UKX5 1188 aa14.45□□□□□ -0.1
LINC00643-207ENST00000637212 UBQLN1Q9UMX0 589 aaKnown RBP14.45□□□□□ -0.1
LINC00643-207ENST00000637212 PCDHB7Q9Y5E2 793 aa14.45□□□□□ -0.1
LINC00643-207ENST00000637212 ARL5CA6NH57 179 aa14.44□□□□□ -0.1
LINC00643-207ENST00000637212 OFD1O75665 1012 aa14.44□□□□□ -0.1
LINC00643-207ENST00000637212 NOL4O94818 638 aa14.44□□□□□ -0.1
LINC00643-207ENST00000637212 VNN1O95497 513 aa14.44□□□□□ -0.1
LINC00643-207ENST00000637212 CST3P01034 146 aaPredicted RBP14.44□□□□□ -0.1
LINC00643-207ENST00000637212 HLA-DRAP01903 254 aa14.44□□□□□ -0.1
LINC00643-207ENST00000637212 NFICP08651 508 aa14.44□□□□□ -0.1
LINC00643-207ENST00000637212 ATF7P17544 494 aaPredicted RBP14.44□□□□□ -0.1
LINC00643-207ENST00000637212 TRIM21P19474 475 aaKnown RBP14.44□□□□□ -0.1
LINC00643-207ENST00000637212 RFX1P22670 979 aa14.44□□□□□ -0.1
LINC00643-207ENST00000637212 ITGB8P26012 769 aa14.44□□□□□ -0.1
LINC00643-207ENST00000637212 TRPC3Q13507 836 aa14.44□□□□□ -0.1
LINC00643-207ENST00000637212 NCOA4Q13772 614 aa14.44□□□□□ -0.1
LINC00643-207ENST00000637212 LMBRD2Q68DH5 695 aaPredicted RBP14.44□□□□□ -0.1
LINC00643-207ENST00000637212 DEFB128Q7Z7B8 93 aa14.44□□□□□ -0.1
LINC00643-207ENST00000637212 SPC24Q8NBT2 197 aa14.44□□□□□ -0.1
LINC00643-207ENST00000637212 CCDC150Q8NCX0 1101 aa14.44□□□□□ -0.1
LINC00643-207ENST00000637212 LINC01599Q8WXQ3 324 aa14.44□□□□□ -0.1
LINC00643-207ENST00000637212 SEMA4DQ92854 862 aa14.44□□□□□ -0.1
LINC00643-207ENST00000637212 VWCEQ96DN2 955 aa14.44□□□□□ -0.1
LINC00643-207ENST00000637212 ZMAT2Q96NC0 199 aaKnown RBP14.44□□□□□ -0.1
LINC00643-207ENST00000637212 MTMR12Q9C0I1 747 aa14.44□□□□□ -0.1
LINC00643-207ENST00000637212 NUCKS1Q9H1E3 243 aaKnown RBP14.44□□□□□ -0.1
LINC00643-207ENST00000637212 RSAD1Q9HA92 442 aa14.44□□□□□ -0.1
LINC00643-207ENST00000637212 SIX2Q9NPC8 291 aa14.44□□□□□ -0.1
LINC00643-207ENST00000637212 FAM207AQ9NSI2 230 aaPredicted RBP14.44□□□□□ -0.1
LINC00643-207ENST00000637212 DPP3Q9NY33 737 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms