RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 ANKRD20A12PQ8NF67 263 aa15.65■□□□□ 0.1
LINC00339-208ENST00000634934 BORCS6Q96GS4 357 aa15.65■□□□□ 0.1
LINC00339-208ENST00000634934 SNX27Q96L92 541 aa15.65■□□□□ 0.1
LINC00339-208ENST00000634934 FNBP1Q96RU3 617 aa15.65■□□□□ 0.1
LINC00339-208ENST00000634934 RSAD1Q9HA92 442 aa15.65■□□□□ 0.1
LINC00339-208ENST00000634934 UBN1Q9NPG3 1134 aa15.65■□□□□ 0.1
LINC00339-208ENST00000634934 RNF19AQ9NV58 838 aa15.65■□□□□ 0.1
LINC00339-208ENST00000634934 GIT1Q9Y2X7 761 aa15.65■□□□□ 0.1
LINC00339-208ENST00000634934 CDH23Q9H251 3354 aa15.64■□□□□ 0.09
LINC00339-208ENST00000634934 PTPRSQ13332 1948 aa15.64■□□□□ 0.09
LINC00339-208ENST00000634934 MEFVO15553 781 aaPredicted RBP15.64■□□□□ 0.09
LINC00339-208ENST00000634934 TRIM49P0CI25 452 aa15.64■□□□□ 0.09
LINC00339-208ENST00000634934 TRIM49CP0CI26 452 aa15.64■□□□□ 0.09
LINC00339-208ENST00000634934 FGFR1P11362 822 aa15.64■□□□□ 0.09
LINC00339-208ENST00000634934 MLH1P40692 756 aa15.64■□□□□ 0.09
LINC00339-208ENST00000634934 WNT7BP56706 349 aa15.64■□□□□ 0.09
LINC00339-208ENST00000634934 POU5F1Q01860 360 aaKnown RBP15.64■□□□□ 0.09
LINC00339-208ENST00000634934 HABP4Q5JVS0 413 aaKnown RBP15.64■□□□□ 0.09
LINC00339-208ENST00000634934 USP37Q86T82 979 aa15.64■□□□□ 0.09
LINC00339-208ENST00000634934 NPAS4Q8IUM7 802 aa15.64■□□□□ 0.09
LINC00339-208ENST00000634934 PLEKHO2Q8TD55 490 aa15.64■□□□□ 0.09
LINC00339-208ENST00000634934 TMC2Q8TDI7 906 aa15.64■□□□□ 0.09
LINC00339-208ENST00000634934 ANKRD7Q92527 254 aa15.64■□□□□ 0.09
LINC00339-208ENST00000634934 RNPC3Q96LT9 517 aaKnown RBP15.64■□□□□ 0.09
LINC00339-208ENST00000634934 ZFP42Q96MM3 310 aa15.64■□□□□ 0.09
LINC00339-208ENST00000634934 RPS6KC1Q96S38 1066 aa15.64■□□□□ 0.09
LINC00339-208ENST00000634934 GAD1Q99259 594 aa15.64■□□□□ 0.09
LINC00339-208ENST00000634934 POP1Q99575 1024 aaKnown RBP15.64■□□□□ 0.09
LINC00339-208ENST00000634934 CXCL16Q9H2A7 254 aa15.64■□□□□ 0.09
LINC00339-208ENST00000634934 ELAC1Q9H777 363 aaKnown RBP15.64■□□□□ 0.09
LINC00339-208ENST00000634934 PLEKHA5Q9HAU0 1116 aa15.64■□□□□ 0.09
LINC00339-208ENST00000634934 RNF216Q9NWF9 866 aaPredicted RBP15.64■□□□□ 0.09
LINC00339-208ENST00000634934 TAB2Q9NYJ8 693 aa15.64■□□□□ 0.09
LINC00339-208ENST00000634934 INPP5FQ9Y2H2 1132 aa15.64■□□□□ 0.09
LINC00339-208ENST00000634934 TTC26A0AVF1 554 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 PES1O00541 588 aaKnown RBP15.63■□□□□ 0.09
LINC00339-208ENST00000634934 TNNI1P19237 187 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 MARSP56192 900 aaKnown RBP15.63■□□□□ 0.09
LINC00339-208ENST00000634934 DLG4P78352 724 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 DEFB103AP81534 67 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 KRT31Q15323 416 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 SURF1Q15526 300 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 GLRA4Q5JXX5 417 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 LMBRD2Q68DH5 695 aaPredicted RBP15.63■□□□□ 0.09
LINC00339-208ENST00000634934 FAM117BQ6P1L5 589 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 GLB1LQ6UWU2 654 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 TRIM59Q8IWR1 403 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 LRRC8AQ8IWT6 810 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 CD302Q8IX05 232 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 ABI1Q8IZP0 508 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 HELQQ8TDG4 1101 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 PARD3BQ8TEW8 1205 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 KIF12Q96FN5 646 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 TUBGCP2Q9BSJ2 902 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 MMRN2Q9H8L6 949 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.63■□□□□ 0.09
LINC00339-208ENST00000634934 ARL5CA6NH57 179 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 LRRIQ3A6PVS8 624 aaPredicted RBP15.63■□□□□ 0.09
LINC00339-208ENST00000634934 SOX1O00570 391 aaPredicted RBP15.63■□□□□ 0.09
LINC00339-208ENST00000634934 SERPINC1P01008 464 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 TFAMQ00059 246 aaKnown RBP15.63■□□□□ 0.09
LINC00339-208ENST00000634934 PLCB2Q00722 1185 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 CLLU1OSQ5K130 101 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 FAM109BQ6ICB4 259 aaPredicted RBP15.63■□□□□ 0.09
LINC00339-208ENST00000634934 JADE1Q6IE81 842 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 ALKAL1Q6UXT8 129 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 TMCO2Q7Z6W1 182 aaPredicted RBP15.63■□□□□ 0.09
LINC00339-208ENST00000634934 SPC24Q8NBT2 197 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 HERVK_113Q902F9 699 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 FAM84AQ96KN4 292 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 CGRRF1Q99675 332 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 MTIF3Q9H2K0 278 aaKnown RBP15.63■□□□□ 0.09
LINC00339-208ENST00000634934 ASB7Q9H672 318 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 CNTN3Q9P232 1028 aa15.63■□□□□ 0.09
LINC00339-208ENST00000634934 LIMA1Q9UHB6 759 aaKnown RBP15.63■□□□□ 0.09
LINC00339-208ENST00000634934 GBF1Q92538 1859 aa15.62■□□□□ 0.09
LINC00339-208ENST00000634934 SMIM28A0A1B0GU29 152 aa15.62■□□□□ 0.09
LINC00339-208ENST00000634934 HOXA2O43364 376 aa15.62■□□□□ 0.09
LINC00339-208ENST00000634934 NFICP08651 508 aa15.62■□□□□ 0.09
LINC00339-208ENST00000634934 GATMP50440 423 aa15.62■□□□□ 0.09
LINC00339-208ENST00000634934 SCNN1GP51170 649 aa15.62■□□□□ 0.09
LINC00339-208ENST00000634934 AFF1P51825 1210 aaKnown RBP15.62■□□□□ 0.09
LINC00339-208ENST00000634934 TMEM132DQ14C87 1099 aa15.62■□□□□ 0.09
LINC00339-208ENST00000634934 MAN2A1Q16706 1144 aa15.62■□□□□ 0.09
LINC00339-208ENST00000634934 RASIP1Q5U651 963 aa15.62■□□□□ 0.09
LINC00339-208ENST00000634934 EFCAB13Q8IY85 973 aa15.62■□□□□ 0.09
LINC00339-208ENST00000634934 TOP1MTQ969P6 601 aa15.62■□□□□ 0.09
LINC00339-208ENST00000634934 SLC35C1Q96A29 364 aa15.62■□□□□ 0.09
LINC00339-208ENST00000634934 ZMAT2Q96NC0 199 aaKnown RBP15.62■□□□□ 0.09
LINC00339-208ENST00000634934 VPS16Q9H269 839 aa15.62■□□□□ 0.09
LINC00339-208ENST00000634934 SLC4A7Q9Y6M7 1214 aa15.62■□□□□ 0.09
LINC00339-208ENST00000634934 MICAL3Q7RTP6 2002 aa15.61■□□□□ 0.09
LINC00339-208ENST00000634934 A0A1W2PPC1 479 aa15.61■□□□□ 0.09
LINC00339-208ENST00000634934 GRXCR1A8MXD5 290 aa15.61■□□□□ 0.09
LINC00339-208ENST00000634934 STX10O60499 249 aa15.61■□□□□ 0.09
LINC00339-208ENST00000634934 POMCP01189 267 aa15.61■□□□□ 0.09
LINC00339-208ENST00000634934 TMEM191BP0C7N4 346 aa15.61■□□□□ 0.09
LINC00339-208ENST00000634934 GCLMP48507 274 aa15.61■□□□□ 0.09
LINC00339-208ENST00000634934 COPB1P53618 953 aaKnown RBP15.61■□□□□ 0.09
LINC00339-208ENST00000634934 KCNH2Q12809 1159 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms