RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 TRAF5O00463 557 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 ARHGAP33O14559 1287 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 TBX1O43435 398 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 GAS7O60861 476 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 DXOO77932 396 aaKnown RBP5.27□□□□□ -1.57
SDCBP-213ENST00000630925 CAMTA2O94983 1202 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 DLDP09622 509 aaKnown RBP5.27□□□□□ -1.57
SDCBP-213ENST00000630925 C5AR1P21730 350 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 ITGA6P23229 1130 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 KRT2P35908 639 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 PEX5P50542 639 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 ZNF143P52747 638 aaPredicted RBP5.27□□□□□ -1.57
SDCBP-213ENST00000630925 CREMQ03060 361 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 CUL2Q13617 745 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 MXD4Q14582 209 aaPredicted RBP5.27□□□□□ -1.57
SDCBP-213ENST00000630925 C15orf59Q2T9L4 293 aaPredicted RBP5.27□□□□□ -1.57
SDCBP-213ENST00000630925 BOLA3Q53S33 107 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 ACAD10Q6JQN1 1059 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 SLC22A25Q6T423 547 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 OLFML1Q6UWY5 402 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 USP45Q70EL2 814 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 GLRX5Q86SX6 157 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 TSPYL5Q86VY4 417 aaPredicted RBP5.27□□□□□ -1.57
SDCBP-213ENST00000630925 CHD1LQ86WJ1 897 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.27□□□□□ -1.57
SDCBP-213ENST00000630925 CCDC13Q8IYE1 715 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 GMCL1P1Q8NEA9 526 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 STT3BQ8TCJ2 826 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 HDAC7Q8WUI4 952 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 LMBR1Q8WVP7 490 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 PTPRN2Q92932 1015 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 NRBF2Q96F24 287 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 TCEANC2Q96MN5 208 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 LRRCC1Q9C099 1032 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 ZCWPW1Q9H0M4 648 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 THAP9Q9H5L6 903 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 NOL6Q9H6R4 1146 aaKnown RBP5.27□□□□□ -1.57
SDCBP-213ENST00000630925 DNAJC18Q9H819 358 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 GLRX2Q9NS18 164 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 KCND1Q9NSA2 647 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 CCM2LQ9NUG4 571 aaPredicted RBP5.27□□□□□ -1.57
SDCBP-213ENST00000630925 AATFQ9NY61 560 aaKnown RBP eCLIP5.27□□□□□ -1.57
SDCBP-213ENST00000630925 AKAP7Q9P0M2 348 aaPredicted RBP5.27□□□□□ -1.57
SDCBP-213ENST00000630925 FAM153AQ9UHL3 310 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 SALL4Q9UJQ4 1053 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 AGO2Q9UKV8 859 aaKnown RBP5.27□□□□□ -1.57
SDCBP-213ENST00000630925 ZNF214Q9UL59 606 aaPredicted RBP5.27□□□□□ -1.57
SDCBP-213ENST00000630925 ATP11BQ9Y2G3 1177 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 MROH2AA6NES4 1674 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 CDK13Q14004 1512 aaKnown RBP5.27□□□□□ -1.57
SDCBP-213ENST00000630925 DIP2CQ9Y2E4 1556 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 GOLGA8AA7E2F4 631 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 GOLGA8BA8MQT2 603 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 ACTN4O43707 911 aaKnown RBP5.27□□□□□ -1.57
SDCBP-213ENST00000630925 TBX10O75333 385 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 CRTAMO95727 393 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 PDGFRAP16234 1089 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 ATP2A2P16615 1042 aaKnown RBP5.27□□□□□ -1.57
SDCBP-213ENST00000630925 HTR1BP28222 390 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 IDUAP35475 653 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 DNM2P50570 870 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 RAD23AP54725 363 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 VAMP2P63027 116 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 CREB5Q02930 508 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 LRMPQ12912 555 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 EFR3AQ14156 821 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 SNX17Q15036 470 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 NTRK3Q16288 839 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 TIGD6Q17RP2 521 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 GNPTABQ3T906 1256 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 SLC2A7Q6PXP3 512 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 DBX2Q6ZNG2 339 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 GRK7Q8WTQ7 553 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 FAM216AQ8WUB2 273 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 AUTS2Q8WXX7 1259 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 SLC9A7Q96T83 725 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 TCF25Q9BQ70 676 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 CARD11Q9BXL7 1154 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 STK33Q9BYT3 514 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 EHD1Q9H4M9 534 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 MED4Q9NPJ6 270 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 C11orf16Q9NQ32 467 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 SEC31BQ9NQW1 1179 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 SERINC1Q9NRX5 453 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 SRP68Q9UHB9 627 aaKnown RBP5.27□□□□□ -1.57
SDCBP-213ENST00000630925 ARHGAP26Q9UNA1 814 aa5.27□□□□□ -1.57
SDCBP-213ENST00000630925 FNDC3AQ9Y2H6 1198 aaKnown RBP5.27□□□□□ -1.57
SDCBP-213ENST00000630925 CHTOPQ9Y3Y2 248 aaKnown RBP5.27□□□□□ -1.57
SDCBP-213ENST00000630925 DNMT1P26358 1616 aaKnown RBP5.26□□□□□ -1.57
SDCBP-213ENST00000630925 XIRP1Q702N8 1843 aaKnown RBP5.26□□□□□ -1.57
SDCBP-213ENST00000630925 ROBO1Q9Y6N7 1651 aa5.26□□□□□ -1.57
SDCBP-213ENST00000630925 BEST1O76090 585 aa5.26□□□□□ -1.57
SDCBP-213ENST00000630925 LARGE1O95461 756 aa5.26□□□□□ -1.57
SDCBP-213ENST00000630925 RARBP10826 455 aa5.26□□□□□ -1.57
SDCBP-213ENST00000630925 NME1P15531 152 aaKnown RBP5.26□□□□□ -1.57
SDCBP-213ENST00000630925 ARF4P18085 180 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-213ENST00000630925 PDCP20941 246 aa5.26□□□□□ -1.57
SDCBP-213ENST00000630925 BMP6P22004 513 aa5.26□□□□□ -1.57
SDCBP-213ENST00000630925 PSMA4P25789 261 aaKnown RBP5.26□□□□□ -1.57
SDCBP-213ENST00000630925 RDXP35241 583 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms