RNA–Protein interactions for RNA: ENST00000627568.2

TCF4-259, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-259ENST00000627568 MFSD1Q9H3U5 465 aa28.08■■■□□ 2.09
TCF4-259ENST00000627568 KCNK12Q9HB15 430 aa28.08■■■□□ 2.09
TCF4-259ENST00000627568 GOLGA2P5Q9HBQ8 144 aa28.08■■■□□ 2.09
TCF4-259ENST00000627568 LARSQ9P2J5 1176 aaKnown RBP28.08■■■□□ 2.09
TCF4-259ENST00000627568 H0YCG3 227 aa28.07■■■□□ 2.08
TCF4-259ENST00000627568 NOLC1Q14978 699 aaKnown RBP eCLIP28.07■■■□□ 2.08
TCF4-259ENST00000627568 TMEM161BQ8NDZ6 487 aa28.07■■■□□ 2.08
TCF4-259ENST00000627568 RASSF8Q8NHQ8 419 aa28.07■■■□□ 2.08
TCF4-259ENST00000627568 DDX27Q96GQ7 796 aaKnown RBP28.07■■■□□ 2.08
TCF4-259ENST00000627568 CACNA1HO95180 2353 aa28.06■■■□□ 2.08
TCF4-259ENST00000627568 N4BP1O75113 896 aaKnown RBP28.06■■■□□ 2.08
TCF4-259ENST00000627568 TOM1L1O75674 476 aa28.06■■■□□ 2.08
TCF4-259ENST00000627568 FGFR3P22607 806 aa28.06■■■□□ 2.08
TCF4-259ENST00000627568 XKR4Q5GH76 650 aa28.06■■■□□ 2.08
TCF4-259ENST00000627568 PPM1LQ5SGD2 360 aa28.06■■■□□ 2.08
TCF4-259ENST00000627568 ALKAL1Q6UXT8 129 aa28.06■■■□□ 2.08
TCF4-259ENST00000627568 ALYREFQ86V81 257 aaKnown RBP28.06■■■□□ 2.08
TCF4-259ENST00000627568 VPS37CA5D8V6 355 aaPredicted RBP28.05■■■□□ 2.08
TCF4-259ENST00000627568 ABLIM1O14639 778 aa28.05■■■□□ 2.08
TCF4-259ENST00000627568 C8AP07357 584 aa28.05■■■□□ 2.08
TCF4-259ENST00000627568 HNRNPA1P09651 372 aaKnown RBP eCLIP28.05■■■□□ 2.08
TCF4-259ENST00000627568 MAPTP10636 758 aaKnown RBP28.05■■■□□ 2.08
TCF4-259ENST00000627568 CACNB1Q02641 598 aaPredicted RBP28.05■■■□□ 2.08
TCF4-259ENST00000627568 ZPBP2Q6X784 338 aa28.05■■■□□ 2.08
TCF4-259ENST00000627568 ANKS3Q6ZW76 656 aa28.05■■■□□ 2.08
TCF4-259ENST00000627568 GET4Q7L5D6 327 aaPredicted RBP28.05■■■□□ 2.08
TCF4-259ENST00000627568 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.05■■■□□ 2.08
TCF4-259ENST00000627568 CNTN3Q9P232 1028 aa28.05■■■□□ 2.08
TCF4-259ENST00000627568 EPS15L1Q9UBC2 864 aa28.05■■■□□ 2.08
TCF4-259ENST00000627568 MTRRQ9UBK8 725 aa28.05■■■□□ 2.08
TCF4-259ENST00000627568 ODF2LQ9ULJ1 636 aa28.05■■■□□ 2.08
TCF4-259ENST00000627568 DUSP12Q9UNI6 340 aa28.05■■■□□ 2.08
TCF4-259ENST00000627568 PODXLO00592 558 aa28.04■■■□□ 2.08
TCF4-259ENST00000627568 PDCP20941 246 aa28.04■■■□□ 2.08
TCF4-259ENST00000627568 OR1D2P34982 312 aa28.04■■■□□ 2.08
TCF4-259ENST00000627568 LONP1P36776 959 aaKnown RBP28.04■■■□□ 2.08
TCF4-259ENST00000627568 MATR3P43243 847 aaKnown RBP eCLIP28.04■■■□□ 2.085e-7■■■■■ 29.7
TCF4-259ENST00000627568 SOX4Q06945 474 aaPredicted RBP28.04■■■□□ 2.08
TCF4-259ENST00000627568 GPBP1Q86WP2 473 aa28.04■■■□□ 2.08
TCF4-259ENST00000627568 BICD1Q96G01 975 aa28.04■■■□□ 2.08
TCF4-259ENST00000627568 MYADMQ96S97 322 aa28.04■■■□□ 2.08
TCF4-259ENST00000627568 FBXL21Q9UKT6 434 aa28.04■■■□□ 2.08
TCF4-259ENST00000627568 NPHP3-ACAD11A0A0J9YXS1 232 aa28.03■■■□□ 2.08
TCF4-259ENST00000627568 CLDN3O15551 220 aa28.03■■■□□ 2.08
TCF4-259ENST00000627568 XYLBO75191 536 aa28.03■■■□□ 2.08
TCF4-259ENST00000627568 KCNE1P15382 129 aa28.03■■■□□ 2.08
TCF4-259ENST00000627568 TKTP29401 623 aaKnown RBP28.03■■■□□ 2.08
TCF4-259ENST00000627568 HOXA9P31269 272 aa28.03■■■□□ 2.08
TCF4-259ENST00000627568 MRE11P49959 708 aa28.03■■■□□ 2.08
TCF4-259ENST00000627568 NUBP1P53384 320 aa28.03■■■□□ 2.08
TCF4-259ENST00000627568 RAB33AQ14088 237 aa28.03■■■□□ 2.08
TCF4-259ENST00000627568 C3orf58Q8NDZ4 430 aa28.03■■■□□ 2.08
TCF4-259ENST00000627568 ZBTB45Q96K62 511 aaPredicted RBP28.03■■■□□ 2.08
TCF4-259ENST00000627568 ZMAT2Q96NC0 199 aaKnown RBP28.03■■■□□ 2.08
TCF4-259ENST00000627568 CDY1Q9Y6F8 540 aa28.03■■■□□ 2.08
TCF4-259ENST00000627568 DOCK6Q96HP0 2047 aa28.02■■■□□ 2.08
TCF4-259ENST00000627568 PDCD11Q14690 1871 aaKnown RBP28.02■■■□□ 2.08
TCF4-259ENST00000627568 ADAM12O43184 909 aa28.02■■■□□ 2.08
TCF4-259ENST00000627568 BRCC3P46736 316 aa28.02■■■□□ 2.08
TCF4-259ENST00000627568 CUL4AQ13619 759 aa28.02■■■□□ 2.08
TCF4-259ENST00000627568 DHX8Q14562 1220 aaKnown RBP28.02■■■□□ 2.08
TCF4-259ENST00000627568 SF3A1Q15459 793 aaKnown RBP28.02■■■□□ 2.08
TCF4-259ENST00000627568 SLC7A14Q8TBB6 771 aa28.02■■■□□ 2.08
TCF4-259ENST00000627568 NXPE3Q969Y0 559 aa28.02■■■□□ 2.08
TCF4-259ENST00000627568 REEP2Q9BRK0 252 aa28.02■■■□□ 2.08
TCF4-259ENST00000627568 IRF2BPLQ9H1B7 796 aa28.02■■■□□ 2.08
TCF4-259ENST00000627568 POLIQ9UNA4 740 aa28.02■■■□□ 2.08
TCF4-259ENST00000627568 NUB1Q9Y5A7 615 aa28.02■■■□□ 2.08
TCF4-259ENST00000627568 BACE2Q9Y5Z0 518 aa28.02■■■□□ 2.08
TCF4-259ENST00000627568 I3L4J1 428 aa28.01■■■□□ 2.07
TCF4-259ENST00000627568 FAM13AO94988 1023 aa28.01■■■□□ 2.07
TCF4-259ENST00000627568 KRT18P05783 430 aaKnown RBP28.01■■■□□ 2.07
TCF4-259ENST00000627568 SCP2P22307 547 aa28.01■■■□□ 2.07
TCF4-259ENST00000627568 FSHRP23945 695 aa28.01■■■□□ 2.07
TCF4-259ENST00000627568 IGFBP6P24592 240 aaPredicted RBP28.01■■■□□ 2.07
TCF4-259ENST00000627568 RPL9P32969 192 aaKnown RBP28.01■■■□□ 2.07
TCF4-259ENST00000627568 NCKAP1LP55160 1127 aa28.01■■■□□ 2.07
TCF4-259ENST00000627568 MCL1Q07820 350 aa28.01■■■□□ 2.07
TCF4-259ENST00000627568 TCF15Q12870 199 aa28.01■■■□□ 2.07
TCF4-259ENST00000627568 ARSHQ5FYA8 562 aa28.01■■■□□ 2.07
TCF4-259ENST00000627568 AXDND1Q5T1B0 1012 aaPredicted RBP28.01■■■□□ 2.07
TCF4-259ENST00000627568 CD300LGQ6UXG3 332 aa28.01■■■□□ 2.07
TCF4-259ENST00000627568 PLCG1P19174 1290 aa28■■■□□ 2.07
TCF4-259ENST00000627568 KARSQ15046 597 aaKnown RBP28■■■□□ 2.07
TCF4-259ENST00000627568 UVSSAQ2YD98 709 aa28■■■□□ 2.07
TCF4-259ENST00000627568 ASTLQ6HA08 431 aaPredicted RBP28■■■□□ 2.07
TCF4-259ENST00000627568 HAUS6Q7Z4H7 955 aa28■■■□□ 2.07
TCF4-259ENST00000627568 GRASPQ7Z6J2 395 aaPredicted RBP28■■■□□ 2.07
TCF4-259ENST00000627568 FLCNQ8NFG4 579 aa28■■■□□ 2.07
TCF4-259ENST00000627568 K7ENM7 598 aa27.99■■■□□ 2.07
TCF4-259ENST00000627568 CCL16O15467 120 aa27.99■■■□□ 2.07
TCF4-259ENST00000627568 LAMP2P13473 410 aa27.99■■■□□ 2.07
TCF4-259ENST00000627568 LIG4P49917 911 aa27.99■■■□□ 2.07
TCF4-259ENST00000627568 SEZ6Q53EL9 994 aa27.99■■■□□ 2.07
TCF4-259ENST00000627568 MYCT1Q8N699 235 aa27.99■■■□□ 2.07
TCF4-259ENST00000627568 RSAD2Q8WXG1 361 aa27.99■■■□□ 2.07
TCF4-259ENST00000627568 C18orf25Q96B23 403 aaPredicted RBP27.99■■■□□ 2.07
TCF4-259ENST00000627568 PARVGQ9HBI0 331 aa27.99■■■□□ 2.07
TCF4-259ENST00000627568 ZFP37Q9Y6Q3 630 aaPredicted RBP27.99■■■□□ 2.07
TCF4-259ENST00000627568 HNRNPDLO14979 420 aaKnown RBP27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms