RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 CYP4A22Q5TCH4 519 aa8.91□□□□□ -0.98
SMN2-214ENST00000626847 CYP26C1Q6V0L0 522 aa8.91□□□□□ -0.98
SMN2-214ENST00000626847 TPTE2Q6XPS3 522 aa8.91□□□□□ -0.98
SMN2-214ENST00000626847 PPP1R42Q7Z4L9 355 aa8.91□□□□□ -0.98
SMN2-214ENST00000626847 SLC51BQ86UW2 128 aa8.91□□□□□ -0.98
SMN2-214ENST00000626847 CCNJLQ8IV13 435 aa8.91□□□□□ -0.98
SMN2-214ENST00000626847 DZIP1LQ8IYY4 767 aaKnown RBP8.91□□□□□ -0.98
SMN2-214ENST00000626847 TMEM151AQ8N4L1 468 aa8.91□□□□□ -0.98
SMN2-214ENST00000626847 LPIN2Q92539 896 aa8.91□□□□□ -0.98
SMN2-214ENST00000626847 DHX38Q92620 1227 aaKnown RBP8.91□□□□□ -0.98
SMN2-214ENST00000626847 CDCA5Q96FF9 252 aa8.91□□□□□ -0.98
SMN2-214ENST00000626847 HIC2Q96JB3 615 aa8.91□□□□□ -0.98
SMN2-214ENST00000626847 HHIPL1Q96JK4 782 aa8.91□□□□□ -0.98
SMN2-214ENST00000626847 RSRP1Q9BUV0 290 aa8.91□□□□□ -0.98
SMN2-214ENST00000626847 PLVAPQ9BX97 442 aa8.91□□□□□ -0.98
SMN2-214ENST00000626847 PLEKHA5Q9HAU0 1116 aa8.91□□□□□ -0.98
SMN2-214ENST00000626847 FANCFQ9NPI8 374 aa8.91□□□□□ -0.98
SMN2-214ENST00000626847 DZANK1Q9NVP4 752 aa8.91□□□□□ -0.98
SMN2-214ENST00000626847 ZNF69Q9UC07 566 aa8.91□□□□□ -0.98
SMN2-214ENST00000626847 ZNF180Q9UJW8 692 aa8.91□□□□□ -0.98
SMN2-214ENST00000626847 EXOC7Q9UPT5 735 aa8.91□□□□□ -0.98
SMN2-214ENST00000626847 TSC22D4Q9Y3Q8 395 aa8.91□□□□□ -0.98
SMN2-214ENST00000626847 SNX9Q9Y5X1 595 aa8.91□□□□□ -0.98
SMN2-214ENST00000626847 COL6A3P12111 3177 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 MINDY4BA8MYZ0 360 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 AKR1B15C9JRZ8 316 aaPredicted RBP8.9□□□□□ -0.98
SMN2-214ENST00000626847 TBX3O15119 743 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 FIBPO43427 364 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 TSPAN9O75954 239 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 PRPF6O94906 941 aaKnown RBP8.9□□□□□ -0.98
SMN2-214ENST00000626847 GHRHP01286 108 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 EPB41P11171 864 aaKnown RBP8.9□□□□□ -0.98
SMN2-214ENST00000626847 PDHBP11177 359 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 TUFMP49411 452 aaKnown RBP8.9□□□□□ -0.98
SMN2-214ENST00000626847 RELQ04864 619 aaPredicted RBP8.9□□□□□ -0.98
SMN2-214ENST00000626847 ITGB3BPQ13352 177 aaPredicted RBP8.9□□□□□ -0.98
SMN2-214ENST00000626847 SEMA3AQ14563 771 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 MAP3K11Q16584 847 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 HYIQ5T013 277 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 RNF187Q5TA31 235 aaPredicted RBP8.9□□□□□ -0.98
SMN2-214ENST00000626847 TSHZ3Q63HK5 1081 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 SIGIRRQ6IA17 410 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 PPP4R3AQ6IN85 833 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 NEK5Q6P3R8 708 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 RASGRP2Q7LDG7 609 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 DDX42Q86XP3 938 aaKnown RBP eCLIP8.9□□□□□ -0.98
SMN2-214ENST00000626847 CROCCP3Q8IVE0 287 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 KIRREL3Q8IZU9 778 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 VPS52Q8N1B4 723 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 ANKRD53Q8N9V6 530 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 ASAP3Q8TDY4 903 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 PEX13Q92968 403 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 MAELQ96JY0 434 aaKnown RBP8.9□□□□□ -0.98
SMN2-214ENST00000626847 CNTNAP3BQ96NU0 1288 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 CLIC6Q96NY7 704 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 LPIN3Q9BQK8 851 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 RIOK1Q9BRS2 568 aaKnown RBP8.9□□□□□ -0.98
SMN2-214ENST00000626847 SPON2Q9BUD6 331 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 CNTNAP3Q9BZ76 1288 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 API5Q9BZZ5 524 aaKnown RBP8.9□□□□□ -0.98
SMN2-214ENST00000626847 NDEL1Q9GZM8 345 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 XAB2Q9HCS7 855 aaKnown RBP8.9□□□□□ -0.98
SMN2-214ENST00000626847 SAGE1Q9NXZ1 904 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 CFL2Q9Y281 166 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 COL4A3BPQ9Y5P4 624 aa8.9□□□□□ -0.98
SMN2-214ENST00000626847 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.9□□□□□ -0.98
SMN2-214ENST00000626847 KANSL1LA0AUZ9 987 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 DPPA5A6NC42 116 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 GNAT3A8MTJ3 354 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 KIF28PB7ZC32 967 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 RASA4BC9J798 803 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 F6X3S4 739 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 EXTL3O43909 919 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 FKBP9O95302 570 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 RHOXF2BP0C7M4 288 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 GZMAP12544 262 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 CTRB1P17538 263 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 IL10P22301 178 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 TMOD1P28289 359 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 TKTP29401 623 aaKnown RBP8.89□□□□□ -0.99
SMN2-214ENST00000626847 HMOX2P30519 316 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 STAT3P40763 770 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 STAT6P42226 847 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 BPIFB3P59826 476 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 UBE2HP62256 183 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 DNAJC3Q13217 504 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 NOGQ13253 232 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 LSAMPQ13449 338 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 PSMD6Q15008 389 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 RRS1Q15050 365 aaKnown RBP8.89□□□□□ -0.99
SMN2-214ENST00000626847 PCSK7Q16549 785 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 SYCP2LQ5T4T6 812 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 METTL11BQ5VVY1 283 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 KIAA1614Q5VZ46 1190 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 CTRB2Q6GPI1 263 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 KIAA1841Q6NSI8 718 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 HFE2Q6ZVN8 426 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 SV2BQ7L1I2 683 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 NPLOC4Q8TAT6 608 aa8.89□□□□□ -0.99
SMN2-214ENST00000626847 PTPRN2Q92932 1015 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms