RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 ZNF236Q9UL36 1845 aa21.15■□□□□ 0.98
TREX1-205ENST00000625293 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.15■□□□□ 0.98
TREX1-205ENST00000625293 ASAP2O43150 1006 aa21.15■□□□□ 0.98
TREX1-205ENST00000625293 HOXD8P13378 290 aaPredicted RBP21.15■□□□□ 0.98
TREX1-205ENST00000625293 MAPK4P31152 587 aa21.15■□□□□ 0.98
TREX1-205ENST00000625293 PAFAH1B1P43034 410 aa21.15■□□□□ 0.98
TREX1-205ENST00000625293 MATR3P43243 847 aaKnown RBP eCLIP21.15■□□□□ 0.98
TREX1-205ENST00000625293 PSMC4P43686 418 aa21.15■□□□□ 0.98
TREX1-205ENST00000625293 CLCN3P51790 818 aa21.15■□□□□ 0.98
TREX1-205ENST00000625293 PTENP60484 403 aa21.15■□□□□ 0.98
TREX1-205ENST00000625293 TFDP1Q14186 410 aa21.15■□□□□ 0.98
TREX1-205ENST00000625293 RPS6KA1Q15418 735 aa21.15■□□□□ 0.98
TREX1-205ENST00000625293 CFAP221Q4G0U5 840 aa21.15■□□□□ 0.98
TREX1-205ENST00000625293 BEND6Q5SZJ8 279 aaPredicted RBP21.15■□□□□ 0.98
TREX1-205ENST00000625293 SYCE1Q8N0S2 351 aa21.15■□□□□ 0.98
TREX1-205ENST00000625293 AFG1LQ8WV93 481 aa21.15■□□□□ 0.98
TREX1-205ENST00000625293 ZBTB10Q96DT7 871 aa21.15■□□□□ 0.98
TREX1-205ENST00000625293 MS4A14Q96JA4 679 aa21.15■□□□□ 0.98
TREX1-205ENST00000625293 NFKBIZQ9BYH8 718 aa21.15■□□□□ 0.98
TREX1-205ENST00000625293 C1orf112Q9NSG2 853 aa21.15■□□□□ 0.98
TREX1-205ENST00000625293 SPDYE4A6NLX3 237 aa21.14■□□□□ 0.97
TREX1-205ENST00000625293 TULP1O00294 542 aaPredicted RBP21.14■□□□□ 0.97
TREX1-205ENST00000625293 ACKR2O00590 384 aa21.14■□□□□ 0.97
TREX1-205ENST00000625293 RTN2O75298 545 aa21.14■□□□□ 0.97
TREX1-205ENST00000625293 GJB1P08034 283 aa21.14■□□□□ 0.97
TREX1-205ENST00000625293 INSRRP14616 1297 aa21.14■□□□□ 0.97
TREX1-205ENST00000625293 ABCB4P21439 1286 aa21.14■□□□□ 0.97
TREX1-205ENST00000625293 CDR2Q01850 454 aa21.14■□□□□ 0.97
TREX1-205ENST00000625293 POU5F1BQ06416 359 aa21.14■□□□□ 0.97
TREX1-205ENST00000625293 CCDC181Q5TID7 509 aa21.14■□□□□ 0.97
TREX1-205ENST00000625293 TSHZ1Q6ZSZ6 1077 aa21.14■□□□□ 0.97
TREX1-205ENST00000625293 DPP9Q86TI2 863 aa21.14■□□□□ 0.97
TREX1-205ENST00000625293 NT5DC3Q86UY8 548 aa21.14■□□□□ 0.97
TREX1-205ENST00000625293 C16orf70Q9BSU1 422 aa21.14■□□□□ 0.97
TREX1-205ENST00000625293 COL1A2P08123 1366 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 OGTO15294 1046 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 BUB1BO60566 1050 aaPredicted RBP21.13■□□□□ 0.97
TREX1-205ENST00000625293 SASH3O75995 380 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 FTLP02792 175 aaPredicted RBP21.13■□□□□ 0.97
TREX1-205ENST00000625293 MMEP08473 750 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 TNFSF9P41273 254 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 PIK3CAP42336 1068 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 MBTD1Q05BQ5 628 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 LONRF2Q1L5Z9 754 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 SEZ6Q53EL9 994 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 TAF3Q5VWG9 929 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 OR5B17Q8NGF7 314 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 APOBEC3GQ9HC16 384 aaKnown RBP21.13■□□□□ 0.97
TREX1-205ENST00000625293 CPSF3Q9UKF6 684 aaKnown RBP21.13■□□□□ 0.97
TREX1-205ENST00000625293 COG5Q9UP83 839 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 SLC15A5A6NIM6 579 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 HARSP12081 509 aaKnown RBP21.13■□□□□ 0.97
TREX1-205ENST00000625293 SMPD1P17405 629 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 PDE6CP51160 858 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 DUSP28Q4G0W2 176 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 WDR44Q5JSH3 913 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 RHOT2Q8IXI1 618 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 NPLOC4Q8TAT6 608 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 HES6Q96HZ4 224 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 PBKQ96KB5 322 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 NLRP4Q96MN2 994 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 TINF2Q9BSI4 451 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 FUT8Q9BYC5 575 aa21.13■□□□□ 0.97
TREX1-205ENST00000625293 BRCA2P51587 3418 aa21.12■□□□□ 0.97
TREX1-205ENST00000625293 MAGEB2O15479 319 aa21.12■□□□□ 0.97
TREX1-205ENST00000625293 PPFIA4O75335 1185 aa21.12■□□□□ 0.97
TREX1-205ENST00000625293 ACO1P21399 889 aaKnown RBP21.12■□□□□ 0.97
TREX1-205ENST00000625293 AP3M2P53677 418 aa21.12■□□□□ 0.97
TREX1-205ENST00000625293 BIRC3Q13489 604 aa21.12■□□□□ 0.97
TREX1-205ENST00000625293 MPZL3Q6UWV2 235 aa21.12■□□□□ 0.97
TREX1-205ENST00000625293 PEX26Q7Z412 305 aa21.12■□□□□ 0.97
TREX1-205ENST00000625293 ZBTB33Q86T24 672 aa21.12■□□□□ 0.97
TREX1-205ENST00000625293 IFNLR1Q8IU57 520 aaPredicted RBP21.12■□□□□ 0.97
TREX1-205ENST00000625293 WDR49Q8IV35 697 aa21.12■□□□□ 0.97
TREX1-205ENST00000625293 TAF4BQ92750 862 aa21.12■□□□□ 0.97
TREX1-205ENST00000625293 CALR3Q96L12 384 aaKnown RBP21.12■□□□□ 0.97
TREX1-205ENST00000625293 RNF216Q9NWF9 866 aaPredicted RBP21.12■□□□□ 0.97
TREX1-205ENST00000625293 ERLIN1O75477 346 aa21.11■□□□□ 0.97
TREX1-205ENST00000625293 MTA2O94776 668 aa21.11■□□□□ 0.97
TREX1-205ENST00000625293 DNA2P51530 1060 aa21.11■□□□□ 0.97
TREX1-205ENST00000625293 GPC5P78333 572 aa21.11■□□□□ 0.97
TREX1-205ENST00000625293 ACVR2BQ13705 512 aa21.11■□□□□ 0.97
TREX1-205ENST00000625293 SPOPLQ6IQ16 392 aa21.11■□□□□ 0.97
TREX1-205ENST00000625293 DAAM2Q86T65 1068 aa21.11■□□□□ 0.97
TREX1-205ENST00000625293 METTL13Q8N6R0 699 aa21.11■□□□□ 0.97
TREX1-205ENST00000625293 ABHD16BQ9H3Z7 469 aa21.11■□□□□ 0.97
TREX1-205ENST00000625293 MINDY3Q9H8M7 445 aa21.11■□□□□ 0.97
TREX1-205ENST00000625293 RBM12Q9NTZ6 932 aaKnown RBP21.11■□□□□ 0.97
TREX1-205ENST00000625293 KCNK3O14649 394 aa21.1■□□□□ 0.97
TREX1-205ENST00000625293 ZNF286BP0CG31 522 aa21.1■□□□□ 0.97
TREX1-205ENST00000625293 MCM3P25205 808 aa21.1■□□□□ 0.97
TREX1-205ENST00000625293 CUL2Q13617 745 aa21.1■□□□□ 0.97
TREX1-205ENST00000625293 FAM187BQ17R55 369 aa21.1■□□□□ 0.97
TREX1-205ENST00000625293 ATF7IP2Q5U623 682 aa21.1■□□□□ 0.97
TREX1-205ENST00000625293 MSL3Q8N5Y2 521 aaKnown RBP21.1■□□□□ 0.97
TREX1-205ENST00000625293 RUBCNQ92622 972 aa21.1■□□□□ 0.97
TREX1-205ENST00000625293 TCHPQ9BT92 498 aa21.1■□□□□ 0.97
TREX1-205ENST00000625293 IFT122Q9HBG6 1241 aa21.1■□□□□ 0.97
TREX1-205ENST00000625293 TMEM59LQ9UK28 342 aa21.1■□□□□ 0.97
TREX1-205ENST00000625293 L1RE1Q9UN81 338 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms