RNA–Protein interactions for RNA: ENST00000623985.3

LINC00643-206, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 864 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-206ENST00000623985 FAM171A1Q5VUB5 890 aa16.19■□□□□ 0.18
LINC00643-206ENST00000623985 RRAGBQ5VZM2 374 aa16.19■□□□□ 0.18
LINC00643-206ENST00000623985 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.19■□□□□ 0.18
LINC00643-206ENST00000623985 CCDC73Q6ZRK6 1079 aa16.19■□□□□ 0.18
LINC00643-206ENST00000623985 CMASQ8NFW8 434 aaPredicted RBP16.19■□□□□ 0.18
LINC00643-206ENST00000623985 HDAC7Q8WUI4 952 aa16.19■□□□□ 0.18
LINC00643-206ENST00000623985 PIK3R5Q8WYR1 880 aa16.19■□□□□ 0.18
LINC00643-206ENST00000623985 ZNF396Q96N95 335 aaPredicted RBP16.19■□□□□ 0.18
LINC00643-206ENST00000623985 FIZ1Q96SL8 496 aa16.19■□□□□ 0.18
LINC00643-206ENST00000623985 LRFN3Q9BTN0 628 aa16.19■□□□□ 0.18
LINC00643-206ENST00000623985 GOLGA2P5Q9HBQ8 144 aa16.19■□□□□ 0.18
LINC00643-206ENST00000623985 TBX20Q9UMR3 447 aa16.19■□□□□ 0.18
LINC00643-206ENST00000623985 PRR33A8MZF0 331 aa16.18■□□□□ 0.18
LINC00643-206ENST00000623985 B3GAT3O94766 335 aa16.18■□□□□ 0.18
LINC00643-206ENST00000623985 YEATS4O95619 227 aa16.18■□□□□ 0.18
LINC00643-206ENST00000623985 COL9A1P20849 921 aa16.18■□□□□ 0.18
LINC00643-206ENST00000623985 SOX4Q06945 474 aaPredicted RBP16.18■□□□□ 0.18
LINC00643-206ENST00000623985 PSMD5Q16401 504 aa16.18■□□□□ 0.18
LINC00643-206ENST00000623985 KYAT1Q16773 422 aa16.18■□□□□ 0.18
LINC00643-206ENST00000623985 ATAT1Q5SQI0 421 aa16.18■□□□□ 0.18
LINC00643-206ENST00000623985 DCLRE1AQ6PJP8 1040 aa16.18■□□□□ 0.18
LINC00643-206ENST00000623985 PRSS55Q6UWB4 352 aaPredicted RBP16.18■□□□□ 0.18
LINC00643-206ENST00000623985 TMC5Q6UXY8 1006 aa16.18■□□□□ 0.18
LINC00643-206ENST00000623985 GPR149Q86SP6 731 aa16.18■□□□□ 0.18
LINC00643-206ENST00000623985 MAP4K3Q8IVH8 894 aa16.18■□□□□ 0.18
LINC00643-206ENST00000623985 LINC00301Q8NCQ3 95 aa16.18■□□□□ 0.18
LINC00643-206ENST00000623985 DDX27Q96GQ7 796 aaKnown RBP16.18■□□□□ 0.18
LINC00643-206ENST00000623985 ZMAT2Q96NC0 199 aaKnown RBP16.18■□□□□ 0.18
LINC00643-206ENST00000623985 RHOBTB2Q9BYZ6 727 aa16.18■□□□□ 0.18
LINC00643-206ENST00000623985 HAPLN2Q9GZV7 340 aa16.18■□□□□ 0.18
LINC00643-206ENST00000623985 ST6GALNAC4Q9H4F1 302 aa16.18■□□□□ 0.18
LINC00643-206ENST00000623985 ZHX3Q9H4I2 956 aa16.18■□□□□ 0.18
LINC00643-206ENST00000623985 PLEKHA4Q9H4M7 779 aa16.18■□□□□ 0.18
LINC00643-206ENST00000623985 TSHZ2Q9NRE2 1034 aa16.18■□□□□ 0.18
LINC00643-206ENST00000623985 SPTLC2O15270 562 aa16.17■□□□□ 0.18
LINC00643-206ENST00000623985 TGM5O43548 720 aa16.17■□□□□ 0.18
LINC00643-206ENST00000623985 TRAPPC3O43617 180 aa16.17■□□□□ 0.18
LINC00643-206ENST00000623985 PPP6R2O75170 966 aa16.17■□□□□ 0.18
LINC00643-206ENST00000623985 PAPLNO95428 1278 aa16.17■□□□□ 0.18
LINC00643-206ENST00000623985 WEE2P0C1S8 567 aa16.17■□□□□ 0.18
LINC00643-206ENST00000623985 CXCL8P10145 99 aa16.17■□□□□ 0.18
LINC00643-206ENST00000623985 SP100P23497 879 aaPredicted RBP16.17■□□□□ 0.18
LINC00643-206ENST00000623985 STAT6P42226 847 aa16.17■□□□□ 0.18
LINC00643-206ENST00000623985 GTF2BQ00403 316 aa16.17■□□□□ 0.18
LINC00643-206ENST00000623985 KANK3Q6NY19 840 aa16.17■□□□□ 0.18
LINC00643-206ENST00000623985 CYP26C1Q6V0L0 522 aa16.17■□□□□ 0.18
LINC00643-206ENST00000623985 SV2BQ7L1I2 683 aa16.17■□□□□ 0.18
LINC00643-206ENST00000623985 CEP57Q86XR8 500 aa16.17■□□□□ 0.18
LINC00643-206ENST00000623985 GLYCTKQ8IVS8 523 aa16.17■□□□□ 0.18
LINC00643-206ENST00000623985 TDRD5Q8NAT2 981 aaKnown RBP16.17■□□□□ 0.18
LINC00643-206ENST00000623985 C3orf58Q8NDZ4 430 aa16.17■□□□□ 0.18
LINC00643-206ENST00000623985 DDX12PQ92771 950 aa16.17■□□□□ 0.18
LINC00643-206ENST00000623985 HVCN1Q96D96 273 aa16.17■□□□□ 0.18
LINC00643-206ENST00000623985 PLEKHA5Q9HAU0 1116 aa16.17■□□□□ 0.18
LINC00643-206ENST00000623985 SEL1LQ9UBV2 794 aa16.17■□□□□ 0.18
LINC00643-206ENST00000623985 USTQ9Y2C2 406 aa16.17■□□□□ 0.18
LINC00643-206ENST00000623985 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.17■□□□□ 0.18
LINC00643-206ENST00000623985 PODXLO00592 558 aa16.16■□□□□ 0.18
LINC00643-206ENST00000623985 MEFVO15553 781 aaPredicted RBP16.16■□□□□ 0.18
LINC00643-206ENST00000623985 F13A1P00488 732 aa16.16■□□□□ 0.18
LINC00643-206ENST00000623985 CLTAP09496 248 aa16.16■□□□□ 0.18
LINC00643-206ENST00000623985 ZSCAN22P10073 491 aaPredicted RBP16.16■□□□□ 0.18
LINC00643-206ENST00000623985 RPL17P18621 184 aaKnown RBP16.16■□□□□ 0.18
LINC00643-206ENST00000623985 FGFR3P22607 806 aa16.16■□□□□ 0.18
LINC00643-206ENST00000623985 PPP2R3AQ06190 1150 aa16.16■□□□□ 0.18
LINC00643-206ENST00000623985 SLC10A6Q3KNW5 377 aa16.16■□□□□ 0.18
LINC00643-206ENST00000623985 SEZ6Q53EL9 994 aa16.16■□□□□ 0.18
LINC00643-206ENST00000623985 CCDC149Q6ZUS6 474 aa16.16■□□□□ 0.18
LINC00643-206ENST00000623985 DYMQ7RTS9 669 aa16.16■□□□□ 0.18
LINC00643-206ENST00000623985 SFR1Q86XK3 245 aa16.16■□□□□ 0.18
LINC00643-206ENST00000623985 PALB2Q86YC2 1186 aa16.16■□□□□ 0.18
LINC00643-206ENST00000623985 LNX1Q8TBB1 728 aaPredicted RBP16.16■□□□□ 0.18
LINC00643-206ENST00000623985 EDAQ92838 391 aa16.16■□□□□ 0.18
LINC00643-206ENST00000623985 ZDHHC7Q9NXF8 308 aa16.16■□□□□ 0.18
LINC00643-206ENST00000623985 DENND4CQ5VZ89 1909 aa16.15■□□□□ 0.18
LINC00643-206ENST00000623985 A0A087X0B3 334 aa16.15■□□□□ 0.18
LINC00643-206ENST00000623985 MYMKA6NI61 221 aa16.15■□□□□ 0.18
LINC00643-206ENST00000623985 C2CD4DB7Z1M9 353 aa16.15■□□□□ 0.18
LINC00643-206ENST00000623985 OGTO15294 1046 aa16.15■□□□□ 0.18
LINC00643-206ENST00000623985 FAM189A1O60320 539 aa16.15■□□□□ 0.18
LINC00643-206ENST00000623985 GAP43P17677 238 aa16.15■□□□□ 0.18
LINC00643-206ENST00000623985 NMT1P30419 496 aaKnown RBP16.15■□□□□ 0.18
LINC00643-206ENST00000623985 RPL9P32969 192 aaKnown RBP16.15■□□□□ 0.18
LINC00643-206ENST00000623985 PTPN21Q16825 1174 aa16.15■□□□□ 0.18
LINC00643-206ENST00000623985 SLC39A4Q6P5W5 647 aa16.15■□□□□ 0.18
LINC00643-206ENST00000623985 LILRA6Q6PI73 481 aa16.15■□□□□ 0.18
LINC00643-206ENST00000623985 CD300LGQ6UXG3 332 aa16.15■□□□□ 0.18
LINC00643-206ENST00000623985 FEZF2Q8TBJ5 459 aa16.15■□□□□ 0.18
LINC00643-206ENST00000623985 C18orf25Q96B23 403 aaPredicted RBP16.15■□□□□ 0.18
LINC00643-206ENST00000623985 DNAJC19Q96DA6 116 aa16.15■□□□□ 0.18
LINC00643-206ENST00000623985 CLSTN3Q9BQT9 956 aa16.15■□□□□ 0.18
LINC00643-206ENST00000623985 MTRRQ9UBK8 725 aa16.15■□□□□ 0.18
LINC00643-206ENST00000623985 FBXW11Q9UKB1 542 aa16.15■□□□□ 0.18
LINC00643-206ENST00000623985 A0A0B4J269 797 aa16.14■□□□□ 0.17
LINC00643-206ENST00000623985 CCDC195A0A1B0GUA6 201 aa16.14■□□□□ 0.17
LINC00643-206ENST00000623985 TTC26A0AVF1 554 aa16.14■□□□□ 0.17
LINC00643-206ENST00000623985 PPP1R37O75864 691 aa16.14■□□□□ 0.17
LINC00643-206ENST00000623985 TKTP29401 623 aaKnown RBP16.14■□□□□ 0.17
LINC00643-206ENST00000623985 TNFSF9P41273 254 aa16.14■□□□□ 0.17
LINC00643-206ENST00000623985 BRCC3P46736 316 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms