RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 KRT13P13646 458 aa21.52■■□□□ 1.03
PDLIM2-221ENST00000622702 TPM4P67936 248 aa21.52■■□□□ 1.03
PDLIM2-221ENST00000622702 PPP2R3AQ06190 1150 aa21.52■■□□□ 1.03
PDLIM2-221ENST00000622702 SPAG1Q07617 926 aa21.52■■□□□ 1.03
PDLIM2-221ENST00000622702 BFSP1Q12934 665 aa21.52■■□□□ 1.03
PDLIM2-221ENST00000622702 USP37Q86T82 979 aa21.52■■□□□ 1.03
PDLIM2-221ENST00000622702 TRIM59Q8IWR1 403 aa21.52■■□□□ 1.03
PDLIM2-221ENST00000622702 PLEKHO2Q8TD55 490 aa21.52■■□□□ 1.03
PDLIM2-221ENST00000622702 PARD3BQ8TEW8 1205 aa21.52■■□□□ 1.03
PDLIM2-221ENST00000622702 ZNF689Q96CS4 500 aaPredicted RBP21.52■■□□□ 1.03
PDLIM2-221ENST00000622702 RBSNQ9H1K0 784 aa21.52■■□□□ 1.03
PDLIM2-221ENST00000622702 RC3H2Q9HBD1 1191 aaKnown RBP21.52■■□□□ 1.03
PDLIM2-221ENST00000622702 CNTN3Q9P232 1028 aa21.52■■□□□ 1.03
PDLIM2-221ENST00000622702 LACTBL1A8MY62 500 aa21.51■■□□□ 1.03
PDLIM2-221ENST00000622702 KCNJ18B7U540 433 aa21.51■■□□□ 1.03
PDLIM2-221ENST00000622702 HOXA2O43364 376 aa21.51■■□□□ 1.03
PDLIM2-221ENST00000622702 GATMP50440 423 aa21.51■■□□□ 1.03
PDLIM2-221ENST00000622702 VAMP7P51809 220 aa21.51■■□□□ 1.03
PDLIM2-221ENST00000622702 WNT7BP56706 349 aa21.51■■□□□ 1.03
PDLIM2-221ENST00000622702 CLDN10P78369 228 aa21.51■■□□□ 1.03
PDLIM2-221ENST00000622702 KCNJ12Q14500 433 aa21.51■■□□□ 1.03
PDLIM2-221ENST00000622702 HSP90AA4PQ58FG1 418 aa21.51■■□□□ 1.03
PDLIM2-221ENST00000622702 TCP11X2Q5H9J9 407 aa21.51■■□□□ 1.03
PDLIM2-221ENST00000622702 RSPH1Q8WYR4 309 aa21.51■■□□□ 1.03
PDLIM2-221ENST00000622702 TSPAN18Q96SJ8 248 aa21.51■■□□□ 1.03
PDLIM2-221ENST00000622702 CERS4Q9HA82 394 aa21.51■■□□□ 1.03
PDLIM2-221ENST00000622702 PDE11AQ9HCR9 933 aa21.51■■□□□ 1.03
PDLIM2-221ENST00000622702 RNF19AQ9NV58 838 aa21.51■■□□□ 1.03
PDLIM2-221ENST00000622702 MTMR10Q9NXD2 777 aa21.51■■□□□ 1.03
PDLIM2-221ENST00000622702 RALGAPA2Q2PPJ7 1873 aa21.5■■□□□ 1.03
PDLIM2-221ENST00000622702 FGFR1P11362 822 aa21.5■■□□□ 1.03
PDLIM2-221ENST00000622702 KCNE1P15382 129 aa21.5■■□□□ 1.03
PDLIM2-221ENST00000622702 BTG3Q14201 252 aaPredicted RBP21.5■■□□□ 1.03
PDLIM2-221ENST00000622702 GRIN2CQ14957 1233 aa21.5■■□□□ 1.03
PDLIM2-221ENST00000622702 GLB1LQ6UWU2 654 aa21.5■■□□□ 1.03
PDLIM2-221ENST00000622702 SPRED2Q7Z698 418 aa21.5■■□□□ 1.03
PDLIM2-221ENST00000622702 CCDC127Q96BQ5 260 aa21.5■■□□□ 1.03
PDLIM2-221ENST00000622702 GAD1Q99259 594 aa21.5■■□□□ 1.03
PDLIM2-221ENST00000622702 KLK14Q9P0G3 267 aa21.5■■□□□ 1.03
PDLIM2-221ENST00000622702 COL4A6Q14031 1691 aa21.5■■□□□ 1.03
PDLIM2-221ENST00000622702 ANK1P16157 1881 aa21.49■■□□□ 1.03
PDLIM2-221ENST00000622702 ARL5CA6NH57 179 aa21.49■■□□□ 1.03
PDLIM2-221ENST00000622702 OFD1O75665 1012 aa21.49■■□□□ 1.03
PDLIM2-221ENST00000622702 MLH1P40692 756 aa21.49■■□□□ 1.03
PDLIM2-221ENST00000622702 PAN2Q504Q3 1202 aaKnown RBP21.49■■□□□ 1.03
PDLIM2-221ENST00000622702 CLLU1OSQ5K130 101 aa21.49■■□□□ 1.03
PDLIM2-221ENST00000622702 NT5DC4Q86YG4 428 aa21.49■■□□□ 1.03
PDLIM2-221ENST00000622702 FIBCD1Q8N539 461 aa21.49■■□□□ 1.03
PDLIM2-221ENST00000622702 GSTCDQ8NEC7 633 aa21.49■■□□□ 1.03
PDLIM2-221ENST00000622702 FAM212AQ96EL1 285 aa21.49■■□□□ 1.03
PDLIM2-221ENST00000622702 ZFP42Q96MM3 310 aa21.49■■□□□ 1.03
PDLIM2-221ENST00000622702 FNBP1Q96RU3 617 aa21.49■■□□□ 1.03
PDLIM2-221ENST00000622702 DERAQ9Y315 318 aa21.49■■□□□ 1.03
PDLIM2-221ENST00000622702 C2CD2Q9Y426 696 aa21.49■■□□□ 1.03
PDLIM2-221ENST00000622702 FNDC1Q4ZHG4 1894 aaPredicted RBP21.48■■□□□ 1.03
PDLIM2-221ENST00000622702 TRANK1O15050 2925 aa21.48■■□□□ 1.03
PDLIM2-221ENST00000622702 LRRIQ3A6PVS8 624 aaPredicted RBP21.48■■□□□ 1.03
PDLIM2-221ENST00000622702 ATP1A3P13637 1013 aa21.48■■□□□ 1.03
PDLIM2-221ENST00000622702 MTIF2P46199 727 aaKnown RBP21.48■■□□□ 1.03
PDLIM2-221ENST00000622702 C1orf220Q5T0J3 134 aa21.48■■□□□ 1.03
PDLIM2-221ENST00000622702 WDR49Q8IV35 697 aa21.48■■□□□ 1.03
PDLIM2-221ENST00000622702 CMTR2Q8IYT2 770 aaKnown RBP21.48■■□□□ 1.03
PDLIM2-221ENST00000622702 ANKRD20A12PQ8NF67 263 aa21.48■■□□□ 1.03
PDLIM2-221ENST00000622702 SLC35C1Q96A29 364 aa21.48■■□□□ 1.03
PDLIM2-221ENST00000622702 RPS6KC1Q96S38 1066 aa21.48■■□□□ 1.03
PDLIM2-221ENST00000622702 CGRRF1Q99675 332 aa21.48■■□□□ 1.03
PDLIM2-221ENST00000622702 CXCL16Q9H2A7 254 aa21.48■■□□□ 1.03
PDLIM2-221ENST00000622702 LIMA1Q9UHB6 759 aaKnown RBP21.48■■□□□ 1.03
PDLIM2-221ENST00000622702 MTUS1Q9ULD2 1270 aa21.48■■□□□ 1.03
PDLIM2-221ENST00000622702 TRIP11Q15643 1979 aa21.48■■□□□ 1.03
PDLIM2-221ENST00000622702 SMIM28A0A1B0GU29 152 aa21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 LRRC10BA6NIK2 292 aa21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 TBKBP1A7MCY6 615 aa21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 PTGESO14684 152 aa21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 DLATP10515 647 aaKnown RBP21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 CDK11BP21127 795 aaKnown RBP21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 DLG4P78352 724 aa21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 KRT31Q15323 416 aa21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 ZBTB6Q15916 424 aa21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 MAN2A1Q16706 1144 aa21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 JADE1Q6IE81 842 aa21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 CREBRFQ8IUR6 639 aa21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 EFCAB13Q8IY85 973 aa21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 ARNTL2Q8WYA1 636 aa21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 ZMAT2Q96NC0 199 aaKnown RBP21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 GUCD1Q96NT3 240 aa21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 TGS1Q96RS0 853 aaKnown RBP21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 TUBGCP2Q9BSJ2 902 aa21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 C17orf80Q9BSJ5 609 aa21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 TMEM117Q9H0C3 514 aa21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 PRDM12Q9H4Q4 367 aa21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.47■■□□□ 1.03
PDLIM2-221ENST00000622702 TRIM49P0CI25 452 aa21.46■■□□□ 1.03
PDLIM2-221ENST00000622702 TRIM49CP0CI26 452 aa21.46■■□□□ 1.03
PDLIM2-221ENST00000622702 GTF2H1P32780 548 aa21.46■■□□□ 1.03
PDLIM2-221ENST00000622702 AFF1P51825 1210 aaKnown RBP21.46■■□□□ 1.03
PDLIM2-221ENST00000622702 AP3M2P53677 418 aa21.46■■□□□ 1.03
PDLIM2-221ENST00000622702 ERVK-21P61565 698 aa21.46■■□□□ 1.03
PDLIM2-221ENST00000622702 TMEM132DQ14C87 1099 aa21.46■■□□□ 1.03
PDLIM2-221ENST00000622702 DCAF17Q5H9S7 520 aaPredicted RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms