RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 SPATA31D4Q6ZUB0 917 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 UBE3BQ7Z3V4 1068 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 ARHGEF19Q8IW93 802 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 RHOT2Q8IXI1 618 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 DRC7Q8IY82 874 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 BEND2Q8NDZ0 799 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 GPR150Q8NGU9 434 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 ZSWIM1Q9BR11 485 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 TMEM140Q9NV12 185 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 INTUQ9ULD6 942 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 PCDHGA9Q9Y5G4 932 aaKnown RBP5.98□□□□□ -1.45
BRCA1-229ENST00000621897 PCDHGA8Q9Y5G5 932 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 PCDHGA7Q9Y5G6 932 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 PCDHGA6Q9Y5G7 932 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 PCDHGA3Q9Y5H0 932 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 FPGT-TNNI3KV9GXZ4 949 aa5.98□□□□□ -1.45
BRCA1-229ENST00000621897 FZD9O00144 591 aa5.97□□□□□ -1.45
BRCA1-229ENST00000621897 NDUFS2O75306 463 aa5.97□□□□□ -1.45
BRCA1-229ENST00000621897 KATNA1O75449 491 aa5.97□□□□□ -1.45
BRCA1-229ENST00000621897 BMPR1AP36894 532 aa5.97□□□□□ -1.45
BRCA1-229ENST00000621897 GUCY2FP51841 1108 aa5.97□□□□□ -1.45
BRCA1-229ENST00000621897 TP53BP2Q13625 1128 aa5.97□□□□□ -1.45
BRCA1-229ENST00000621897 SYDE2Q5VT97 1194 aa5.97□□□□□ -1.45
BRCA1-229ENST00000621897 TSHZ3Q63HK5 1081 aa5.97□□□□□ -1.45
BRCA1-229ENST00000621897 SEM1Q6ZVN7 128 aa5.97□□□□□ -1.45
BRCA1-229ENST00000621897 PRPF38AQ8NAV1 312 aaKnown RBP5.97□□□□□ -1.45
BRCA1-229ENST00000621897 FAXDC2Q96IV6 333 aa5.97□□□□□ -1.45
BRCA1-229ENST00000621897 MKS1Q9NXB0 559 aa5.97□□□□□ -1.45
BRCA1-229ENST00000621897 ATP11BQ9Y2G3 1177 aa5.97□□□□□ -1.45
BRCA1-229ENST00000621897 OVOL3O00110 214 aa5.96□□□□□ -1.46
BRCA1-229ENST00000621897 GABRDO14764 452 aa5.96□□□□□ -1.46
BRCA1-229ENST00000621897 SPDEFO95238 335 aa5.96□□□□□ -1.46
BRCA1-229ENST00000621897 POMCP01189 267 aa5.96□□□□□ -1.46
BRCA1-229ENST00000621897 GCP02774 474 aa5.96□□□□□ -1.46
BRCA1-229ENST00000621897 CFIP05156 583 aa5.96□□□□□ -1.46
BRCA1-229ENST00000621897 MYBL2P10244 700 aa5.96□□□□□ -1.46
BRCA1-229ENST00000621897 DDCP20711 480 aa5.96□□□□□ -1.46
BRCA1-229ENST00000621897 DDX6P26196 483 aaKnown RBP eCLIP5.96□□□□□ -1.46
BRCA1-229ENST00000621897 INHBEP58166 350 aa5.96□□□□□ -1.46
BRCA1-229ENST00000621897 PURAQ00577 322 aaKnown RBP5.96□□□□□ -1.46
BRCA1-229ENST00000621897 ITKQ08881 620 aa5.96□□□□□ -1.46
BRCA1-229ENST00000621897 RESTQ13127 1097 aa5.96□□□□□ -1.46
BRCA1-229ENST00000621897 UBXN2BQ14CS0 331 aa5.96□□□□□ -1.46
BRCA1-229ENST00000621897 ACAP2Q15057 778 aa5.96□□□□□ -1.46
BRCA1-229ENST00000621897 PCBP2Q15366 365 aaKnown RBP eCLIP5.96□□□□□ -1.46
BRCA1-229ENST00000621897 SMN1Q16637 294 aaKnown RBP5.96□□□□□ -1.46
BRCA1-229ENST00000621897 B3GNTL1Q67FW5 361 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-229ENST00000621897 MAPKAPK5Q8IW41 473 aa5.96□□□□□ -1.46
BRCA1-229ENST00000621897 RHOT1Q8IXI2 618 aa5.96□□□□□ -1.46
BRCA1-229ENST00000621897 DCBLD1Q8N8Z6 715 aa5.96□□□□□ -1.46
BRCA1-229ENST00000621897 ASB10Q8WXI3 467 aa5.96□□□□□ -1.46
BRCA1-229ENST00000621897 MTMR8Q96EF0 704 aa5.96□□□□□ -1.46
BRCA1-229ENST00000621897 CYFIP2Q96F07 1278 aa5.96□□□□□ -1.46
BRCA1-229ENST00000621897 FUBP3Q96I24 572 aaKnown RBP eCLIP5.96□□□□□ -1.46
BRCA1-229ENST00000621897 C7orf25Q9BPX7 421 aa5.96□□□□□ -1.46
BRCA1-229ENST00000621897 POLR2AP24928 1970 aaKnown RBP5.96□□□□□ -1.46
BRCA1-229ENST00000621897 MYBBP1AQ9BQG0 1328 aaKnown RBP5.96□□□□□ -1.46
BRCA1-229ENST00000621897 AATKQ6ZMQ8 1374 aa5.95□□□□□ -1.46
BRCA1-229ENST00000621897 B3GALT2O43825 422 aa5.95□□□□□ -1.46
BRCA1-229ENST00000621897 WASP42768 502 aa5.95□□□□□ -1.46
BRCA1-229ENST00000621897 GUCY1B3Q02153 619 aa5.95□□□□□ -1.46
BRCA1-229ENST00000621897 OCA2Q04671 838 aa5.95□□□□□ -1.46
BRCA1-229ENST00000621897 TARDBPQ13148 414 aaKnown RBP eCLIP5.95□□□□□ -1.46
BRCA1-229ENST00000621897 HECTD2Q5U5R9 776 aa5.95□□□□□ -1.46
BRCA1-229ENST00000621897 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.95□□□□□ -1.46
BRCA1-229ENST00000621897 SSH1Q8WYL5 1049 aa5.95□□□□□ -1.46
BRCA1-229ENST00000621897 MANSC1Q9H8J5 431 aa5.95□□□□□ -1.46
BRCA1-229ENST00000621897 FAM30AQ9NZY2 134 aa5.95□□□□□ -1.46
BRCA1-229ENST00000621897 PCDHA13Q9Y5I0 950 aa5.95□□□□□ -1.46
BRCA1-229ENST00000621897 A0A1B0GTW7 788 aa5.94□□□□□ -1.46
BRCA1-229ENST00000621897 TCRBV7S2A1N4TA0A589 114 aa5.94□□□□□ -1.46
BRCA1-229ENST00000621897 FGFR4P22455 802 aa5.94□□□□□ -1.46
BRCA1-229ENST00000621897 GCSHP23434 173 aa5.94□□□□□ -1.46
BRCA1-229ENST00000621897 SCAPQ12770 1279 aa5.94□□□□□ -1.46
BRCA1-229ENST00000621897 CMTR2Q8IYT2 770 aaKnown RBP5.94□□□□□ -1.46
BRCA1-229ENST00000621897 TMEM132CQ8N3T6 1108 aa5.94□□□□□ -1.46
BRCA1-229ENST00000621897 CYP4F11Q9HBI6 524 aa5.94□□□□□ -1.46
BRCA1-229ENST00000621897 SYBUQ9NX95 663 aa5.94□□□□□ -1.46
BRCA1-229ENST00000621897 USP25Q9UHP3 1055 aa5.94□□□□□ -1.46
BRCA1-229ENST00000621897 PACSIN3Q9UKS6 424 aa5.94□□□□□ -1.46
BRCA1-229ENST00000621897 LIMCH1Q9UPQ0 1083 aa5.94□□□□□ -1.46
BRCA1-229ENST00000621897 TEX33O43247 280 aa5.93□□□□□ -1.46
BRCA1-229ENST00000621897 XPOTO43592 962 aaKnown RBP5.93□□□□□ -1.46
BRCA1-229ENST00000621897 HLA-DOAP06340 250 aa5.93□□□□□ -1.46
BRCA1-229ENST00000621897 EDNRBP24530 442 aa5.93□□□□□ -1.46
BRCA1-229ENST00000621897 SLC6A4P31645 630 aa5.93□□□□□ -1.46
BRCA1-229ENST00000621897 TEKT5Q96M29 485 aa5.93□□□□□ -1.46
BRCA1-229ENST00000621897 GSTO2Q9H4Y5 243 aa5.93□□□□□ -1.46
BRCA1-229ENST00000621897 IPPQ9Y573 584 aa5.93□□□□□ -1.46
BRCA1-229ENST00000621897 PIPSLA2A3N6 862 aa5.92□□□□□ -1.46
BRCA1-229ENST00000621897 KLHL33A6NCF5 533 aa5.92□□□□□ -1.46
BRCA1-229ENST00000621897 KIAA0391O15091 583 aaKnown RBP5.92□□□□□ -1.46
BRCA1-229ENST00000621897 HTRA2O43464 458 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-229ENST00000621897 CDKL5O76039 1030 aa5.92□□□□□ -1.46
BRCA1-229ENST00000621897 EGR2P11161 476 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-229ENST00000621897 CTXN1P60606 82 aa5.92□□□□□ -1.46
BRCA1-229ENST00000621897 NOMO3P69849 1222 aa5.92□□□□□ -1.46
BRCA1-229ENST00000621897 HSD11B2P80365 405 aa5.92□□□□□ -1.46
BRCA1-229ENST00000621897 IL10RAQ13651 578 aa5.92□□□□□ -1.46
BRCA1-229ENST00000621897 C3orf36Q3SXR2 165 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms