RNA–Protein interactions for RNA: ENST00000621573.1

TARDBP-224, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-224ENST00000621573 C11orf49Q9H6J7 331 aa9.18□□□□□ -0.94
TARDBP-224ENST00000621573 SYNRGQ9UMZ2 1314 aa9.18□□□□□ -0.94
TARDBP-224ENST00000621573 SMC3Q9UQE7 1217 aa9.18□□□□□ -0.94
TARDBP-224ENST00000621573 Q9Y3F1 56 aa9.18□□□□□ -0.94
TARDBP-224ENST00000621573 KIF3AQ9Y496 699 aa9.18□□□□□ -0.94
TARDBP-224ENST00000621573 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.18□□□□□ -0.94
TARDBP-224ENST00000621573 MYADML2A6NDP7 307 aa9.17□□□□□ -0.94
TARDBP-224ENST00000621573 DNM1LO00429 736 aa9.17□□□□□ -0.94
TARDBP-224ENST00000621573 FIBPO43427 364 aa9.17□□□□□ -0.94
TARDBP-224ENST00000621573 TGFB3P10600 412 aa9.17□□□□□ -0.94
TARDBP-224ENST00000621573 KRT2P35908 639 aa9.17□□□□□ -0.94
TARDBP-224ENST00000621573 GJA9P57773 515 aa9.17□□□□□ -0.94
TARDBP-224ENST00000621573 TNK2Q07912 1038 aa9.17□□□□□ -0.94
TARDBP-224ENST00000621573 MTMR1Q13613 665 aa9.17□□□□□ -0.94
TARDBP-224ENST00000621573 NONOQ15233 471 aaKnown RBP eCLIP9.17□□□□□ -0.94
TARDBP-224ENST00000621573 KCNA10Q16322 511 aa9.17□□□□□ -0.94
TARDBP-224ENST00000621573 FSCN1Q16658 493 aaKnown RBP9.17□□□□□ -0.94
TARDBP-224ENST00000621573 CCDC62Q6P9F0 684 aa9.17□□□□□ -0.94
TARDBP-224ENST00000621573 PLA2G4DQ86XP0 818 aa9.17□□□□□ -0.94
TARDBP-224ENST00000621573 TAB3Q8N5C8 712 aaPredicted RBP9.17□□□□□ -0.94
TARDBP-224ENST00000621573 PCSK9Q8NBP7 692 aaKnown RBP9.17□□□□□ -0.94
TARDBP-224ENST00000621573 TBCKQ8TEA7 893 aa9.17□□□□□ -0.94
TARDBP-224ENST00000621573 CPLX3Q8WVH0 158 aa9.17□□□□□ -0.94
TARDBP-224ENST00000621573 FERMT2Q96AC1 680 aa9.17□□□□□ -0.94
TARDBP-224ENST00000621573 CDHR1Q96JP9 859 aa9.17□□□□□ -0.94
TARDBP-224ENST00000621573 INPP4AQ96PE3 977 aaPredicted RBP9.17□□□□□ -0.94
TARDBP-224ENST00000621573 MXRA8Q9BRK3 442 aa9.17□□□□□ -0.94
TARDBP-224ENST00000621573 SENP6Q9GZR1 1112 aaPredicted RBP9.17□□□□□ -0.94
TARDBP-224ENST00000621573 UPF3AQ9H1J1 476 aaKnown RBP9.17□□□□□ -0.94
TARDBP-224ENST00000621573 MLXIPQ9HAP2 919 aa9.17□□□□□ -0.94
TARDBP-224ENST00000621573 JADE2Q9NQC1 790 aa9.17□□□□□ -0.94
TARDBP-224ENST00000621573 SNX11Q9Y5W9 270 aa9.17□□□□□ -0.94
TARDBP-224ENST00000621573 UBIAD1Q9Y5Z9 338 aa9.17□□□□□ -0.94
TARDBP-224ENST00000621573 FAM86C2PA6NEL3 165 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 LRRN2O75325 713 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 GGPS1O95749 300 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 MMP1P03956 469 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 MYL3P08590 195 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 ITGB5P18084 799 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 UBA1P22314 1058 aaKnown RBP9.16□□□□□ -0.94
TARDBP-224ENST00000621573 GUCY2CP25092 1073 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 CST5P28325 142 aaPredicted RBP9.16□□□□□ -0.94
TARDBP-224ENST00000621573 GJB2P29033 226 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 ICAM3P32942 547 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 CPT1AP50416 773 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 CLCN7P51798 805 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 SP4Q02446 784 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 BNIP3Q12983 259 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 NEDD9Q14511 834 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 NPY5RQ15761 445 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 INF2Q27J81 1249 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 CEP55Q53EZ4 464 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 CELF3Q5SZQ8 465 aaKnown RBP9.16□□□□□ -0.94
TARDBP-224ENST00000621573 PIK3AP1Q6ZUJ8 805 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 TMEM192Q8IY95 271 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 DIS3L2Q8IYB7 885 aaKnown RBP9.16□□□□□ -0.94
TARDBP-224ENST00000621573 SLC43A3Q8NBI5 491 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 KLHDC9Q8NEP7 349 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 CYP2W1Q8TAV3 490 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 BCL7CQ8WUZ0 217 aaPredicted RBP9.16□□□□□ -0.94
TARDBP-224ENST00000621573 AFG1LQ8WV93 481 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 SNX21Q969T3 373 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 MISP3Q96FF7 219 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 HRASLS5Q96KN8 279 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 FBXL18Q96ME1 805 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 SPATA33Q96N06 139 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 HTATIP2Q9BUP3 242 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 ASPNQ9BXN1 380 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 VAV3Q9UKW4 847 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 STRIP2Q9ULQ0 834 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 ST14Q9Y5Y6 855 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 PLXNA1Q9UIW2 1896 aa9.16□□□□□ -0.94
TARDBP-224ENST00000621573 MCM3APO60318 1980 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 BTBD18B2RXH4 712 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 H3BQV1 296 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 MEIS1O00470 390 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 NOP56O00567 594 aaKnown RBP9.15□□□□□ -0.94
TARDBP-224ENST00000621573 MAFGO15525 162 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 WNT11O96014 354 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 ASGR1P07306 291 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 HSP90AA1P07900 732 aaKnown RBP9.15□□□□□ -0.94
TARDBP-224ENST00000621573 CYP3A4P08684 503 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 ARP10275 920 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 RGS19P49795 217 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 ACLYP53396 1101 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 CHMP4BP1P59074 171 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 SP2Q02086 613 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 ARID5AQ03989 594 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 PRKCQQ04759 706 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 ARHGAP1Q07960 439 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 CUL4AQ13619 759 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 LETM2Q2VYF4 491 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 PRR16Q569H4 304 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 CDKAL1Q5VV42 579 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 CXCL17Q6UXB2 119 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 WFDC3Q8IUB2 231 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 OR6P1Q8NGX9 317 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 PIWIL2Q8TC59 973 aaKnown RBP9.15□□□□□ -0.94
TARDBP-224ENST00000621573 DPF3Q92784 378 aa9.15□□□□□ -0.94
TARDBP-224ENST00000621573 HSPA12BQ96MM6 686 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms