RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 USP15Q9Y4E8 981 aaPredicted RBP8.83□□□□□ -1
ALMS1-208ENST00000620466 EIF4E1BA6NMX2 242 aaKnown RBP8.83□□□□□ -1
ALMS1-208ENST00000620466 PDHA1P08559 390 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 ARFIP2P53365 341 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 PSMC1P62191 440 aaKnown RBP8.83□□□□□ -1
ALMS1-208ENST00000620466 GIT2Q14161 759 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 SPOPLQ6IQ16 392 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 PPP4R4Q6NUP7 873 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 C3orf67Q6ZVT6 689 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 ARMCX2Q7L311 632 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 SPATA17Q96L03 361 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 FAM167BQ9BTA0 163 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 TSPYL2Q9H2G4 693 aaPredicted RBP8.83□□□□□ -1
ALMS1-208ENST00000620466 UNC45AQ9H3U1 944 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 SUDS3Q9H7L9 328 aaPredicted RBP8.83□□□□□ -1
ALMS1-208ENST00000620466 G3BP2Q9UN86 482 aaKnown RBP8.83□□□□□ -1
ALMS1-208ENST00000620466 HEY1Q9Y5J3 304 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 PI4K2BG5E9Z4 385 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 GLI1P08151 1106 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 COILP38432 576 aaPredicted RBP8.83□□□□□ -1
ALMS1-208ENST00000620466 FOXD4Q12950 439 aaPredicted RBP8.83□□□□□ -1
ALMS1-208ENST00000620466 PPP6R3Q5H9R7 873 aaPredicted RBP8.83□□□□□ -1
ALMS1-208ENST00000620466 ZC3H18Q86VM9 953 aaKnown RBP8.83□□□□□ -1
ALMS1-208ENST00000620466 NGRNQ9NPE2 291 aaKnown RBP8.83□□□□□ -1
ALMS1-208ENST00000620466 TLK1Q9UKI8 766 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 FBXW4P57775 412 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 ZNF568Q3ZCX4 644 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 ZNF571Q7Z3V5 609 aaPredicted RBP8.83□□□□□ -1
ALMS1-208ENST00000620466 RCOR2Q8IZ40 523 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 PRPF38AQ8NAV1 312 aaKnown RBP8.83□□□□□ -1
ALMS1-208ENST00000620466 ATP11CQ8NB49 1132 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 MKNK1Q9BUB5 465 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 FGFR1OP2Q9NVK5 253 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 DMGDHQ9UI17 866 aaKnown RBP8.83□□□□□ -1
ALMS1-208ENST00000620466 POLE2P56282 527 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 C18orf8Q96DM3 657 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 BTBD6Q96KE9 485 aa8.83□□□□□ -1
ALMS1-208ENST00000620466 FAM49AQ9H0Q0 323 aaPredicted RBP8.83□□□□□ -1
ALMS1-208ENST00000620466 F5H423 210 aaPredicted RBP8.82□□□□□ -1
ALMS1-208ENST00000620466 MX2P20592 715 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 PMLP29590 882 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 ITGA8P53708 1063 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 RAD23BP54727 409 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 SH3BGRP55822 239 aaPredicted RBP8.82□□□□□ -1
ALMS1-208ENST00000620466 SLC29A2Q14542 456 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 BARGINQ6ZT62 677 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 DNAAF5Q86Y56 855 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 NDUFAF2Q8N183 169 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 TTLL6Q8N841 843 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 OR6B3Q8NGW1 331 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 ACTRT1Q8TDG2 376 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 RAPGEF5Q92565 580 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 GNAT1P11488 350 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 CASP4P49662 377 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 PLA2G4FQ68DD2 849 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 TRPM8Q7Z2W7 1104 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 TXNRD3Q86VQ6 643 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 HOMEZQ8IX15 550 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 PPM1NQ8N819 430 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 SCFD1Q8WVM8 642 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 NUDCD1Q96RS6 583 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 ADAM33Q9BZ11 813 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 SLC9A2Q9UBY0 812 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 PCDHA10Q9Y5I2 948 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 COL5A2P05997 1499 aaPredicted RBP8.82□□□□□ -1
ALMS1-208ENST00000620466 CCT8L1PA6NM43 557 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 KRT7P08729 469 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 MAPK6Q16659 721 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 KLC3Q6P597 504 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 RHPN2Q8IUC4 686 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 AENQ8WTP8 325 aaKnown RBP8.82□□□□□ -1
ALMS1-208ENST00000620466 HDAC7Q8WUI4 952 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 PNMA5Q96PV4 448 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 ALG13Q9NP73 1137 aaKnown RBP8.82□□□□□ -1
ALMS1-208ENST00000620466 CYP26B1Q9NR63 512 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 PAMP19021 973 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 KCNJ1P48048 391 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 IL17AQ16552 155 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 RSBN1LQ6PCB5 846 aaPredicted RBP8.82□□□□□ -1
ALMS1-208ENST00000620466 ANGPTL8Q6UXH0 198 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 CXorf38Q8TB03 319 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 MYCBPAPQ8TBZ2 947 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 IFT43Q96FT9 208 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 SENP7Q9BQF6 1050 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 RPAP3Q9H6T3 665 aaPredicted RBP8.82□□□□□ -1
ALMS1-208ENST00000620466 AGPAT3Q9NRZ7 376 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 INPP5FQ9Y2H2 1132 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 TMEM120BA0PK00 339 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 MAP2K7O14733 419 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 TAP1Q03518 808 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 TFDP2Q14188 446 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 FOXR1Q6PIV2 292 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 EPS8L3Q8TE67 593 aaKnown RBP8.82□□□□□ -1
ALMS1-208ENST00000620466 MTMR8Q96EF0 704 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 RBM15Q96T37 977 aaKnown RBP eCLIP8.82□□□□□ -1
ALMS1-208ENST00000620466 MMP19Q99542 508 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 ZSWIM1Q9BR11 485 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 MXRA8Q9BRK3 442 aa8.82□□□□□ -1
ALMS1-208ENST00000620466 ROPN1BQ9BZX4 212 aaPredicted RBP8.82□□□□□ -1
ALMS1-208ENST00000620466 ROPN1Q9HAT0 212 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms