RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 LIG1P18858 919 aa24.22■■□□□ 1.47
SRRT-218ENST00000620394 NPTX2P47972 431 aa24.22■■□□□ 1.47
SRRT-218ENST00000620394 STARD6P59095 220 aa24.22■■□□□ 1.47
SRRT-218ENST00000620394 RTP2Q5QGT7 225 aa24.22■■□□□ 1.47
SRRT-218ENST00000620394 KCNK18Q7Z418 384 aa24.22■■□□□ 1.47
SRRT-218ENST00000620394 KCTD17Q8N5Z5 321 aa24.22■■□□□ 1.47
SRRT-218ENST00000620394 RABGGTAQ92696 567 aa24.22■■□□□ 1.47
SRRT-218ENST00000620394 FOXQ1Q9C009 403 aa24.22■■□□□ 1.47
SRRT-218ENST00000620394 TMEM134Q9H6X4 195 aa24.22■■□□□ 1.47
SRRT-218ENST00000620394 DLL3Q9NYJ7 618 aa24.22■■□□□ 1.47
SRRT-218ENST00000620394 PDCD11Q14690 1871 aaKnown RBP24.21■■□□□ 1.47
SRRT-218ENST00000620394 CACNA1IQ9P0X4 2223 aa24.21■■□□□ 1.47
SRRT-218ENST00000620394 KINO60870 393 aaKnown RBP24.21■■□□□ 1.47
SRRT-218ENST00000620394 HIP1RO75146 1068 aa24.21■■□□□ 1.47
SRRT-218ENST00000620394 TADA2AO75478 443 aa24.21■■□□□ 1.47
SRRT-218ENST00000620394 ZMYND10O75800 440 aa24.21■■□□□ 1.47
SRRT-218ENST00000620394 GJB2P29033 226 aa24.21■■□□□ 1.47
SRRT-218ENST00000620394 CDC25AP30304 524 aa24.21■■□□□ 1.47
SRRT-218ENST00000620394 MCM2P49736 904 aa24.21■■□□□ 1.47
SRRT-218ENST00000620394 DMP1Q13316 513 aaPredicted RBP24.21■■□□□ 1.47
SRRT-218ENST00000620394 MCTP1Q6DN14 999 aa24.21■■□□□ 1.47
SRRT-218ENST00000620394 RINT1Q6NUQ1 792 aa24.21■■□□□ 1.47
SRRT-218ENST00000620394 LILRA6Q6PI73 481 aa24.21■■□□□ 1.47
SRRT-218ENST00000620394 C1orf186Q6ZWK4 172 aa24.21■■□□□ 1.47
SRRT-218ENST00000620394 TAS1R3Q7RTX0 852 aa24.21■■□□□ 1.47
SRRT-218ENST00000620394 APBB1IPQ7Z5R6 666 aaPredicted RBP24.21■■□□□ 1.47
SRRT-218ENST00000620394 GLYCTKQ8IVS8 523 aa24.21■■□□□ 1.47
SRRT-218ENST00000620394 PIK3R5Q8WYR1 880 aa24.21■■□□□ 1.47
SRRT-218ENST00000620394 BORCS6Q96GS4 357 aa24.21■■□□□ 1.47
SRRT-218ENST00000620394 DRC1Q96MC2 740 aa24.21■■□□□ 1.47
SRRT-218ENST00000620394 TIPINQ9BVW5 301 aa24.21■■□□□ 1.47
SRRT-218ENST00000620394 C17orf75Q9HAS0 396 aa24.21■■□□□ 1.47
SRRT-218ENST00000620394 UPF2Q9HAU5 1272 aaKnown RBP24.21■■□□□ 1.47
SRRT-218ENST00000620394 TMEM189-UBE2V1I3L0A0 370 aa24.2■■□□□ 1.46
SRRT-218ENST00000620394 K7ERI5 159 aa24.2■■□□□ 1.46
SRRT-218ENST00000620394 FSHRP23945 695 aa24.2■■□□□ 1.46
SRRT-218ENST00000620394 PEX3P56589 373 aa24.2■■□□□ 1.46
SRRT-218ENST00000620394 SUMF1Q8NBK3 374 aa24.2■■□□□ 1.46
SRRT-218ENST00000620394 PPP1R10Q96QC0 940 aaKnown RBP24.2■■□□□ 1.46
SRRT-218ENST00000620394 PTPRHQ9HD43 1115 aa24.2■■□□□ 1.46
SRRT-218ENST00000620394 GDAQ9Y2T3 454 aa24.2■■□□□ 1.46
SRRT-218ENST00000620394 CEP250Q9BV73 2442 aa24.2■■□□□ 1.46
SRRT-218ENST00000620394 SPTLC1O15269 473 aa24.19■■□□□ 1.46
SRRT-218ENST00000620394 GLULP15104 373 aa24.19■■□□□ 1.46
SRRT-218ENST00000620394 GUCY2CP25092 1073 aa24.19■■□□□ 1.46
SRRT-218ENST00000620394 ELAVL2Q12926 359 aaKnown RBP24.19■■□□□ 1.46
SRRT-218ENST00000620394 ZNF528Q3MIS6 628 aa24.19■■□□□ 1.46
SRRT-218ENST00000620394 ARL6IP4Q66PJ3 421 aaKnown RBP24.19■■□□□ 1.46
SRRT-218ENST00000620394 HASPINQ8TF76 798 aa24.19■■□□□ 1.46
SRRT-218ENST00000620394 TBC1D32Q96NH3 1257 aa24.19■■□□□ 1.46
SRRT-218ENST00000620394 ACO2Q99798 780 aaKnown RBP24.19■■□□□ 1.46
SRRT-218ENST00000620394 TTPALQ9BTX7 342 aa24.19■■□□□ 1.46
SRRT-218ENST00000620394 CDT1Q9H211 546 aa24.19■■□□□ 1.46
SRRT-218ENST00000620394 FBXW11Q9UKB1 542 aa24.19■■□□□ 1.46
SRRT-218ENST00000620394 CDH7Q9ULB5 785 aa24.19■■□□□ 1.46
SRRT-218ENST00000620394 CCDC169A6NNP5 214 aa24.18■■□□□ 1.46
SRRT-218ENST00000620394 HNRNPA1P09651 372 aaKnown RBP eCLIP24.18■■□□□ 1.46
SRRT-218ENST00000620394 RPL17P18621 184 aaKnown RBP24.18■■□□□ 1.46
SRRT-218ENST00000620394 PROZP22891 400 aa24.18■■□□□ 1.46
SRRT-218ENST00000620394 GRM5P41594 1212 aa24.18■■□□□ 1.46
SRRT-218ENST00000620394 XKR4Q5GH76 650 aa24.18■■□□□ 1.46
SRRT-218ENST00000620394 LIN9Q5TKA1 542 aa24.18■■□□□ 1.46
SRRT-218ENST00000620394 PRSS55Q6UWB4 352 aaPredicted RBP24.18■■□□□ 1.46
SRRT-218ENST00000620394 MTSS1LQ765P7 747 aa24.18■■□□□ 1.46
SRRT-218ENST00000620394 FGF14Q92915 247 aa24.18■■□□□ 1.46
SRRT-218ENST00000620394 PNMA5Q96PV4 448 aa24.18■■□□□ 1.46
SRRT-218ENST00000620394 MRPL4Q9BYD3 311 aaKnown RBP24.18■■□□□ 1.46
SRRT-218ENST00000620394 BCO2Q9BYV7 579 aa24.18■■□□□ 1.46
SRRT-218ENST00000620394 FBXO4Q9UKT5 387 aa24.18■■□□□ 1.46
SRRT-218ENST00000620394 RBM19Q9Y4C8 960 aaKnown RBP24.18■■□□□ 1.46
SRRT-218ENST00000620394 DOCK6Q96HP0 2047 aa24.18■■□□□ 1.46
SRRT-218ENST00000620394 KANSL1LA0AUZ9 987 aa24.17■■□□□ 1.46
SRRT-218ENST00000620394 H3BQV1 296 aa24.17■■□□□ 1.46
SRRT-218ENST00000620394 ABLIM1O14639 778 aa24.17■■□□□ 1.46
SRRT-218ENST00000620394 PRKCQQ04759 706 aa24.17■■□□□ 1.46
SRRT-218ENST00000620394 FAM171A1Q5VUB5 890 aa24.17■■□□□ 1.46
SRRT-218ENST00000620394 MAML2Q8IZL2 1156 aaPredicted RBP24.17■■□□□ 1.46
SRRT-218ENST00000620394 DCLK2Q8N568 766 aa24.17■■□□□ 1.46
SRRT-218ENST00000620394 CEP120Q8N960 986 aa24.17■■□□□ 1.46
SRRT-218ENST00000620394 LNX1Q8TBB1 728 aaPredicted RBP24.17■■□□□ 1.46
SRRT-218ENST00000620394 NTPCRQ9BSD7 190 aaKnown RBP24.17■■□□□ 1.46
SRRT-218ENST00000620394 DDX23Q9BUQ8 820 aaKnown RBP24.17■■□□□ 1.46
SRRT-218ENST00000620394 KMT5AQ9NQR1 393 aa24.17■■□□□ 1.46
SRRT-218ENST00000620394 COL4A3Q01955 1670 aa24.17■■□□□ 1.46
SRRT-218ENST00000620394 HOXA9P31269 272 aa24.16■■□□□ 1.46
SRRT-218ENST00000620394 MAGEA9P43362 315 aa24.16■■□□□ 1.46
SRRT-218ENST00000620394 GPC5P78333 572 aa24.16■■□□□ 1.46
SRRT-218ENST00000620394 MLF2Q15773 248 aaPredicted RBP24.16■■□□□ 1.46
SRRT-218ENST00000620394 PSMD5Q16401 504 aa24.16■■□□□ 1.46
SRRT-218ENST00000620394 ZNF568Q3ZCX4 644 aa24.16■■□□□ 1.46
SRRT-218ENST00000620394 TMEM119Q4V9L6 283 aa24.16■■□□□ 1.46
SRRT-218ENST00000620394 GLRA4Q5JXX5 417 aa24.16■■□□□ 1.46
SRRT-218ENST00000620394 PDXDC1Q6P996 788 aa24.16■■□□□ 1.46
SRRT-218ENST00000620394 PARM1Q6UWI2 310 aa24.16■■□□□ 1.46
SRRT-218ENST00000620394 ALKAL1Q6UXT8 129 aa24.16■■□□□ 1.46
SRRT-218ENST00000620394 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.16■■□□□ 1.46
SRRT-218ENST00000620394 SYT2Q8N9I0 419 aaPredicted RBP24.16■■□□□ 1.46
SRRT-218ENST00000620394 SPIRE2Q8WWL2 714 aa24.16■■□□□ 1.46
SRRT-218ENST00000620394 UROC1Q96N76 676 aa24.16■■□□□ 1.46
SRRT-218ENST00000620394 CLSTN3Q9BQT9 956 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms