RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 H7C4K7 107 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 C2CD2LO14523 706 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 ZNF263O14978 683 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 GDF9O60383 454 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 MOSPD3O75425 235 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 PSEN1P49768 467 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 NCBP1Q09161 790 aaKnown RBP5.1□□□□□ -1.59
SNCA-213ENST00000618500 LMAN2Q12907 356 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 ZNF268Q14587 947 aaPredicted RBP5.1□□□□□ -1.59
SNCA-213ENST00000618500 PLK5Q496M5 336 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 RNF43Q68DV7 783 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 GALNT17Q6IS24 598 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 PRR23BQ6ZRT6 265 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 RABEPKQ7Z6M1 372 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 PDZD3Q86UT5 571 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 FERMT3Q86UX7 667 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 CHD1LQ86WJ1 897 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 PROSER1Q86XN7 944 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 CCDC148Q8NFR7 591 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 ETNPPLQ8TBG4 499 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 SCLT1Q96NL6 688 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 TSPAN18Q96SJ8 248 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 DUSP15Q9H1R2 295 aaPredicted RBP5.1□□□□□ -1.59
SNCA-213ENST00000618500 BRD9Q9H8M2 597 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 SEPT9Q9UHD8 586 aaPredicted RBP5.1□□□□□ -1.59
SNCA-213ENST00000618500 MRPS23Q9Y3D9 190 aaKnown RBP5.1□□□□□ -1.59
SNCA-213ENST00000618500 ASB3Q9Y575 518 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 SLC12A7Q9Y666 1083 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 A0A1B0GUA9 196 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 TRDMT1O14717 391 aaKnown RBP5.1□□□□□ -1.59
SNCA-213ENST00000618500 N4BP3O15049 544 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 SGSM2O43147 1006 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 EDIL3O43854 480 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 SSBP05455 408 aaKnown RBP eCLIP5.1□□□□□ -1.59
SNCA-213ENST00000618500 FGFR4P22455 802 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 MLH1P40692 756 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 LAMTOR4Q0VGL1 99 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 DRP2Q13474 957 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 SLC5A9Q2M3M2 681 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 HSF5Q4G112 596 aaPredicted RBP5.1□□□□□ -1.59
SNCA-213ENST00000618500 FBXO43Q4G163 708 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 TMEM196Q5HYL7 178 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 PSAPL1Q6NUJ1 521 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 CEP68Q76N32 757 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 GLRX5Q86SX6 157 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 REXO1Q8N1G1 1221 aaKnown RBP5.1□□□□□ -1.59
SNCA-213ENST00000618500 SLC7A14Q8TBB6 771 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 RILPL2Q969X0 211 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 KIF12Q96FN5 646 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 UBL7Q96S82 380 aaPredicted RBP5.1□□□□□ -1.59
SNCA-213ENST00000618500 EDEM2Q9BV94 578 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 LRRC3Q9BY71 257 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 TMEM9BQ9NQ34 198 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 PTPRBP23467 1997 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 SPECC1L-ADORA2AF8WAN1 911 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 M0R2N6 131 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 CCL16O15467 120 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 PRPF3O43395 683 aaKnown RBP5.09□□□□□ -1.59
SNCA-213ENST00000618500 GAS7O60861 476 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 POMCP01189 267 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 ARL2P36404 184 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 SCNN1GP51170 649 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 DCAF4L1Q3SXM0 396 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 ANO5Q75V66 913 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 MIER3Q7Z3K6 550 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 RASSF3Q86WH2 238 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 PALB2Q86YC2 1186 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 KCNV2Q8TDN2 545 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 CSGALNACT1Q8TDX6 532 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 SLC7A3Q8WY07 619 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 KCNN1Q92952 543 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 DDX27Q96GQ7 796 aaKnown RBP5.09□□□□□ -1.59
SNCA-213ENST00000618500 ARRDC1-AS1Q9H2J1 176 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 SLC32A1Q9H598 525 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 KIF9Q9HAQ2 790 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 MIOSQ9NXC5 875 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 VAV3Q9UKW4 847 aa5.09□□□□□ -1.59
SNCA-213ENST00000618500 TRAPPC3O43617 180 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 TADA2AO75478 443 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 DKK1O94907 266 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 KIF4AO95239 1232 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 XRCC6P12956 609 aaKnown RBP eCLIP5.09□□□□□ -1.6
SNCA-213ENST00000618500 ATF2P15336 505 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 DDX6P26196 483 aaKnown RBP eCLIP5.09□□□□□ -1.6
SNCA-213ENST00000618500 CTHP32929 405 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 NOVA1P51513 510 aaKnown RBP5.09□□□□□ -1.6
SNCA-213ENST00000618500 NTHL1P78549 312 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 SEMA3BQ13214 749 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 SF3A2Q15428 464 aaKnown RBP5.09□□□□□ -1.6
SNCA-213ENST00000618500 ELF2Q15723 593 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 TTC22Q5TAA0 569 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 LRCH2Q5VUJ6 765 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 PMS2CLQ68D20 193 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 APOA5Q6Q788 366 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 CD300LGQ6UXG3 332 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 APBB1IPQ7Z5R6 666 aaPredicted RBP5.09□□□□□ -1.6
SNCA-213ENST00000618500 TMC8Q8IU68 726 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 RHPN2Q8IUC4 686 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 ZNF461Q8TAF7 563 aa5.09□□□□□ -1.6
SNCA-213ENST00000618500 OLIG1Q8TAK6 271 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms