RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 FANCMQ8IYD8 2048 aa9.44□□□□□ -0.9
GPC6-202ENST00000617456 INO80B-WBP1J3KQ70 363 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 SPTLC1O15269 473 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 TSPAN1O60635 241 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 DGAT1O75907 488 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 EFEMP2O95967 443 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 C1RP00736 705 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 SDHBP21912 280 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 TRAPPC10P48553 1259 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 CALCRLQ16602 461 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 ZNF528Q3MIS6 628 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 PPM1LQ5SGD2 360 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 LIN9Q5TKA1 542 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 TSSK4Q6SA08 328 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 TPRG1Q6ZUI0 275 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 FERMT3Q86UX7 667 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 CDR2LQ86X02 465 aaPredicted RBP9.43□□□□□ -0.9
GPC6-202ENST00000617456 DIS3L2Q8IYB7 885 aaKnown RBP9.43□□□□□ -0.9
GPC6-202ENST00000617456 OXER1Q8TDS5 423 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 HASPINQ8TF76 798 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 ING5Q8WYH8 240 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 MTMR9Q96QG7 549 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 MTRQ99707 1265 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 LXNQ9BS40 222 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 CSRNP2Q9H175 543 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 NXF3Q9H4D5 531 aaKnown RBP9.43□□□□□ -0.9
GPC6-202ENST00000617456 LTB4R2Q9NPC1 389 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 PARP2Q9UGN5 583 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 ADAM28Q9UKQ2 775 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 FBXO4Q9UKT5 387 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 GIT1Q9Y2X7 761 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 KIF3AQ9Y496 699 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 PCDHGA2Q9Y5H1 932 aa9.43□□□□□ -0.9
GPC6-202ENST00000617456 ZFP37Q9Y6Q3 630 aaPredicted RBP9.43□□□□□ -0.9
GPC6-202ENST00000617456 KMT2BQ9UMN6 2715 aaPredicted RBP9.42□□□□□ -0.9
GPC6-202ENST00000617456 ZMYM2Q9UBW7 1377 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 BTBD18B2RXH4 712 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 NEMFO60524 1076 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 PAPLNO95428 1278 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 NPTXRO95502 500 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 C8AP07357 584 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 PRR29P0C7W0 189 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 TARSP26639 723 aaKnown RBP9.42□□□□□ -0.9
GPC6-202ENST00000617456 RBM25P49756 843 aaKnown RBP9.42□□□□□ -0.9
GPC6-202ENST00000617456 CYP4A11Q02928 519 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 CREMQ03060 361 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 LMNB2Q03252 620 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 PRKCQQ04759 706 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 NR5A1Q13285 461 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 TFDP1Q14186 410 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 CTTNQ14247 550 aaKnown RBP9.42□□□□□ -0.9
GPC6-202ENST00000617456 LPAL2Q16609 132 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 XKR9Q5GH70 373 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 RTP2Q5QGT7 225 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 ZBTB41Q5SVQ8 909 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 NCAPH2Q6IBW4 605 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 MTSS1LQ765P7 747 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 HACE1Q8IYU2 909 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 KCTD17Q8N5Z5 321 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 GPR161Q8N6U8 529 aaKnown RBP9.42□□□□□ -0.9
GPC6-202ENST00000617456 FBXO18Q8NFZ0 1043 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 SNRNP27Q8WVK2 155 aaKnown RBP9.42□□□□□ -0.9
GPC6-202ENST00000617456 FGF13Q92913 245 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 PAAF1Q9BRP4 392 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 DDX23Q9BUQ8 820 aaKnown RBP9.42□□□□□ -0.9
GPC6-202ENST00000617456 TTC12Q9H892 705 aaPredicted RBP9.42□□□□□ -0.9
GPC6-202ENST00000617456 MED4Q9NPJ6 270 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 ZSCAN32Q9NX65 697 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 RGL1Q9NZL6 768 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 FBXW11Q9UKB1 542 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 MIA3Q5JRA6 1907 aa9.42□□□□□ -0.9
GPC6-202ENST00000617456 F5P12259 2224 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 MYH15Q9Y2K3 1946 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 MTCL1Q9Y4B5 1905 aaKnown RBP9.41□□□□□ -0.9
GPC6-202ENST00000617456 SF3B1O75533 1304 aaKnown RBP eCLIP9.41□□□□□ -0.9
GPC6-202ENST00000617456 KLHL33A6NCF5 533 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 CASTOR2A6NHX0 329 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 PRR5-ARHGAP8B1AHC4 643 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 ZBTB39O15060 712 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 ADAM12O43184 909 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 B4GALT5O43286 388 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 XYLBO75191 536 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 HNRNPA1P09651 372 aaKnown RBP eCLIP9.41□□□□□ -0.9
GPC6-202ENST00000617456 ARF4P18085 180 aaPredicted RBP9.41□□□□□ -0.9
GPC6-202ENST00000617456 PTENP60484 403 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 ARHGAP8P85298 464 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 PFKPQ01813 784 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 MBTD1Q05BQ5 628 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 PDIA5Q14554 519 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 PSMD5Q16401 504 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 EARS2Q5JPH6 523 aaKnown RBP9.41□□□□□ -0.9
GPC6-202ENST00000617456 FAM171A1Q5VUB5 890 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 GPR65Q8IYL9 337 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 NECAB1Q8N987 351 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 SLC7A14Q8TBB6 771 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 ASAP3Q8TDY4 903 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 DYDC2Q96IM9 177 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 PRIMPOLQ96LW4 560 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 TIGD1Q96MW7 591 aa9.41□□□□□ -0.9
GPC6-202ENST00000617456 EIF2AK1Q9BQI3 630 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms